EY702372

Overview
NameEY702372
Unique NameEY702372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1151 contig Csv1_Contig1151:447..1352. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG3_IPOBA (ATP synthase subunit gamma, mitochondrial OS=Ipomoea batatas GN=ATPC PE=1 SV=2)

HSP 1 Score: 377.867 bits (969), Expect = 4.448e-104
Identity = 192/217 (88.48%), Postives = 209/217 (96.31%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 658
            I TISSDKGLCGGINST+VK S+++HKLNSGP+KENKYVILGEKAKA LVRDSKKDIELIITELQKNPLNYTQVSV+ADDILKNVEFDALRI+++KF SVVSF+PTM+TVLSPE+VERE+ESGGKLG+LDSYEIEG E+K E+LQNL EFQFS V+FNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG
Sbjct:  110 IITISSDKGLCGGINSTSVKTSRNIHKLNSGPEKENKYVILGEKAKAQLVRDSKKDIELIITELQKNPLNYTQVSVVADDILKNVEFDALRIVFNKFQSVVSFVPTMSTVLSPEVVERESESGGKLGDLDSYEIEGAESKSEVLQNLTEFQFSSVLFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 326          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG3_ARATH (ATP synthase subunit gamma, mitochondrial OS=Arabidopsis thaliana GN=ATPC PE=1 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 6.011e-101
Identity = 183/216 (84.72%), Postives = 205/216 (94.91%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 655
            + T+SSDKGLCGGINST VK+S++L+KLN+GP+KE ++VI+GEKAKAI+ RDSK DI L +TEL KNPLNY QVSVLADDILKNVEFDALRI+Y+KFHSVV+FLPT++TVLSPE++E+E+E GGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSE GARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE
Sbjct:  107 VVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDILKNVEFDALRIVYNKFHSVVAFLPTVSTVLSPEIIEKESEIGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEMGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 322          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_PELUB (ATP synthase gamma chain OS=Pelagibacter ubique GN=atpG PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.845e-34
Identity = 91/219 (41.55%), Postives = 128/219 (58.45%), Query Frame = 2
Query:    5 CIATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            CI  ++SD+GLCGG N+  +K +K+  +  S   K  K + +G K    L R  K  I   I+      +NY     +   I++N E   FD   I Y+KF +V++ +P    ++  +  E E  S       D+YE E  E   EIL NL     S  +F A+LEN+ SEQG+RMSAMD+++RNAGEM+D+LT+ YNR+RQA+IT ELIEIISGA +L
Sbjct:   81 CIV-LTSDRGLCGGFNTNIIKKAKTYFQKISDEGKTLKIITVGSKGYDQLKRVYKDAIVERISFKDSKTINYLDAEKVGKMIIENFEKEEFDVCTIFYNKFKNVITQIPQEQQIIPLKTSEAEENSSE-----DNYEFEPDED--EILSNLLPKNISTQIFKAMLENSASEQGSRMSAMDNATRNAGEMVDKLTIEYNRSRQAAITKELIEIISGAESL 291          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_METC4 (ATP synthase gamma chain OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=atpG PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.108e-33
Identity = 88/218 (40.37%), Postives = 120/218 (55.05%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   + D+GL G  NS+  ++++          K  K + +G+K   +L R  +  I          P++Y   + +ADDIL   E   FD   + YS+F SV+S +PT   ++  EL   E  S    G   + E E  E    IL+ L     +  +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct:   81 LVVCTGDRGLAGAFNSSIARLARDHANRLMADGKTVKIITIGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKLIPAELPTAEGASATGAGSDAAMEFEPNEET--ILETLLPKNLTVQIFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 296          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_METEP (ATP synthase gamma chain OS=Methylobacterium extorquens (strain PA1) GN=atpG PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.151e-33
Identity = 87/218 (39.91%), Postives = 120/218 (55.05%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   + D+GL G  NS+  ++++          K  K + +G+K   +L R  +  I          P++Y   + +ADDIL   E   FD   + YS+F SV+S +PT   ++  EL   E  +    G   + E E  E    IL+ L     +  +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct:   81 LVVCTGDRGLAGAFNSSIARLARDHANRLMADGKTVKIITIGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKLIPAELPTAEGAAATGAGSDAAMEFEPNEET--ILETLLPKNLTVQIFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 296          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_JANSC (ATP synthase gamma chain OS=Jannaschia sp. (strain CCS1) GN=atpG PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.039e-32
Identity = 85/220 (38.64%), Postives = 129/220 (58.64%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSP--ELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  +++++GLCGG NST V+ ++   +   G  K  K + +G+K +  L RD    +   +       L Y   + +A D+L   E   FD   I +++F SV+S +PT   ++    E VE   ++    G L  YE     ++  +L++L     +  +F A+LEN  SEQGARMSAMD+++RNAG+M+DRLT+ YNR+RQA IT+ELIEIISGA AL
Sbjct:   81 LVVMTAERGLCGGFNSTIVRKARVHAQKLLGEGKTIKILTVGKKGREQLRRDYADHLIGHVDLSDVKRLGYADAASIATDVLNRFEEDEFDVATIFFNRFESVISQIPTATQIIPAVFEDVEEADDTSKDSGTLYEYE----PSEEAVLEDLLPRGIATQIFTALLENGASEQGARMSAMDNATRNAGDMIDRLTIEYNRSRQAVITSELIEIISGAEAL 296          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BOVIN (ATP synthase subunit gamma, mitochondrial OS=Bos taurus GN=ATP5C1 PE=1 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 2.662e-32
Identity = 83/217 (38.25%), Postives = 132/217 (60.83%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 655
            I  +SSD+GLCG I+S+  K  KS     +   KE K + +G+K ++IL R       +   E+ + P  +   SV+A ++L +  EFD   II+++F SV+S+      + S + +   AES     ++D+          ++L+N  E+  + +++ ++ E+  SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct:   93 IIGVSSDRGLCGAIHSSVAKQMKSEAANLAAAGKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTIS-SAESMSIYDDIDA----------DVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_METPB (ATP synthase gamma chain OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=atpG PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.477e-32
Identity = 87/218 (39.91%), Postives = 122/218 (55.96%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   + D+GL G  NS+  ++++          K  K + +G+K   +L R  +  I          P++Y   + +ADDIL   E   FD   + YS+F SV+S +PT   ++  EL + +  + G  G   + E E  E    IL+ L     +  +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct:   81 LVVCTGDRGLAGAFNSSIARLARDHANRLMAEGKTVKIMTVGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKIIPAELPQTDGAAKGA-GSDAAMEFEPSEET--ILETLLPKNLTVQVFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 295          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_HUMAN (ATP synthase subunit gamma, mitochondrial OS=Homo sapiens GN=ATP5C1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.541e-32
Identity = 84/214 (39.25%), Postives = 128/214 (59.81%), Query Frame = 2
Query:   17 ISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 655
            +SSD+GLCG I+S+  K  KS     +   KE   V +G+K + IL R       +   E+ + P  +   SV+A ++L +  EFD   II++KF SV+S+      + S   V   A+S     ++D+          ++LQN  E+  + +++ ++ E+  SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct:   96 VSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIFSLNTVA-SADSMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_MACFA (ATP synthase subunit gamma, mitochondrial OS=Macaca fascicularis GN=ATP5C1 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.931e-32
Identity = 82/214 (38.32%), Postives = 129/214 (60.28%), Query Frame = 2
Query:   17 ISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 655
            +SSD+GLCG I+S+  K  KS     +   KE   V +G+K + IL R       +   E+ + P  +   SV+A ++L +  EFD   +I+++F SV+S+      + S   +   AES     ++D+          ++LQN  E+  + +++ ++ E++ SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+
Sbjct:   96 VSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSVIFNRFRSVISYKTEEKPIFSLNTIA-SAESMSIYDDIDA----------DVLQNYQEYNLANIIYYSLKESSTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298          
The following BLAST results are available for this feature:
BLAST of EY702372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG3_IPOBA4.448e-10488.48ATP synthase subunit gamma, mitochondrial OS=Ipomo... [more]
ATPG3_ARATH6.011e-10184.72ATP synthase subunit gamma, mitochondrial OS=Arabi... [more]
ATPG_PELUB2.845e-3441.55ATP synthase gamma chain OS=Pelagibacter ubique GN... [more]
ATPG_METC44.108e-3340.37ATP synthase gamma chain OS=Methylobacterium chlor... [more]
ATPG_METEP9.151e-3339.91ATP synthase gamma chain OS=Methylobacterium extor... [more]
ATPG_JANSC2.039e-3238.64ATP synthase gamma chain OS=Jannaschia sp. (strain... [more]
ATPG_BOVIN2.662e-3238.25ATP synthase subunit gamma, mitochondrial OS=Bos t... [more]
ATPG_METPB3.477e-3239.91ATP synthase gamma chain OS=Methylobacterium popul... [more]
ATPG_HUMAN4.541e-3239.25ATP synthase subunit gamma, mitochondrial OS=Homo ... [more]
ATPG_MACFA5.931e-3238.32ATP synthase subunit gamma, mitochondrial OS=Macac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702372 ID=EY702372; Name=EY702372; organism=Citrus sinensis; type=EST; length=904bp
AGAATGTATTGCGACCATCTCTTCTGACAAAGGTCTATGTGGTGGAATTA
ACTCTACTGCAGTTAAGATAAGCAAGAGTTTGCACAAGTTGAATTCTGGT
CCCGACAAAGAAAACAAATACGTCATCTTGGGAGAGAAGGCAAAGGCAAT
ATTAGTACGTGACTCGAAGAAAGATATTGAACTCATCATAACTGAGTTAC
AGAAAAATCCTCTAAATTATACCCAGGTTTCCGTTCTTGCAGATGATATC
TTAAAGAATGTAGAATTTGATGCTTTGAGGATTATCTATAGCAAGTTCCA
TTCTGTGGTCTCCTTTCTGCCGACAATGGCAACTGTATTATCGCCTGAGC
TTGTGGAGAGAGAAGCCGAATCTGGGGGAAAGCTTGGTGAGCTAGACTCC
TATGAAATTGAAGGCGGTGAAACAAAGGGTGAAATACTTCAAAATCTGGC
TGAGTTCCAATTCTCTTGTGTCATGTTCAATGCGGTGTTGGAGAATGCTT
GCAGTGAGCAAGGGGCAAGGATGTCTGCCATGGATAGCTCAAGCAGAAAT
GCGGGAGAAATGCTTGATCGCCTCACTCTTACTTATAACAGAACTCGTCA
AGCATCTATCACCACCGAGTTGATTGAGATTATATCTGGAGCATCAGCAC
TGGAAGGCTGATTACAAAAGCGACAGTGCTCACTTTTCTTGACAGTGACG
AAATAATCCTTGGTGGANGGCTTGNTCAAACTTCATGTGGTACTTTCATA
AGAGTTTTTGTTGAGCTACTCCANNTATCTCTCCAGTGTCAAAACTTCTT
TTTGGGGAATTACANTTATACTTGCGATATTTTCCATATAGTTTTTGATC
CTCCATTATGTGCCTTTGCAGTGACATAAATGGCTTGGNTGTTGGGACTC
CCAG
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