EY702369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702369 vs. ExPASy Swiss-Prot
Match: PSAD_NICSY (Photosystem I reaction center subunit II, chloroplastic OS=Nicotiana sylvestris GN=psaD PE=2 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 4.029e-84 Identity = 142/182 (78.02%), Postives = 152/182 (83.52%), Query Frame = 3 Query: 30 MAATTQASLFAPANFSTTKSSAPWKQS-SSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPQDGVYPEKVTPERKELGR 572 MA TQASLF PA S KSSAPWKQS +SFS + LK I+AMAE + T EAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREG NLLKLARKEQCLALGTRLRSKYKI Y+FYRVFPNGEVQYLHP+DGVYPEKV R+ +G+ Sbjct: 1 MAMATQASLFTPA-LSAPKSSAPWKQSLASFSPKQLKSTVSAPRPIRAMAE-EAATKEAEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGANLLKLARKEQCLALGTRLRSKYKINYRFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQ 180 HSP 2 Score: 59.3066 bits (142), Expect = 4.029e-84 Identity = 26/31 (83.87%), Postives = 30/31 (96.77%), Query Frame = 2 Query: 551 GKEGVGQNYRSIGKNVSPIEVKFTGKQMYDL 643 G++GVGQN+RSIGKN SPIEVKFTGKQ+YDL Sbjct: 174 GRQGVGQNFRSIGKNKSPIEVKFTGKQVYDL 204
BLAST of EY702369 vs. ExPASy Swiss-Prot
Match: PSAD_CUCSA (Photosystem I reaction center subunit II, chloroplastic OS=Cucumis sativus GN=psaD PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 5.744e-83 Identity = 138/187 (73.80%), Postives = 151/187 (80.75%), Query Frame = 3 Query: 30 MAATTQASLFAPANFSTTKS---SAPWKQSSSFSV---RPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPQDGVYPEKVTPERKELGR 572 MA TQA+LF P+ ST KS S PWKQSS+ S +P A + + K AE +T EAP GF+PPELDP+TPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHP+DGVYPEKV P R+ +G+ Sbjct: 1 MAMATQATLFTPS-LSTPKSTGISIPWKQSSTLSFLTSKPHLKAASSSRSFKVSAEAETSV---EAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQ 183 HSP 2 Score: 65.855 bits (159), Expect = 5.744e-83 Identity = 29/33 (87.88%), Postives = 33/33 (100.00%), Query Frame = 2 Query: 545 DPGKEGVGQNYRSIGKNVSPIEVKFTGKQMYDL 643 +PG+EGVGQN+RSIGKNVSPIEVKFTGKQ+YDL Sbjct: 175 NPGREGVGQNFRSIGKNVSPIEVKFTGKQVYDL 207
BLAST of EY702369 vs. ExPASy Swiss-Prot
Match: PSAD_SOLLC (Photosystem I reaction center subunit II, chloroplastic OS=Solanum lycopersicum GN=psaD PE=2 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.275e-82 Identity = 139/184 (75.54%), Postives = 149/184 (80.98%), Query Frame = 3 Query: 30 MAATTQASLFAPANFSTTKSSAPWKQSS-SFSV-RPLKHNAPRTNTIKAMAE-GKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPQDGVYPEKVTPERKELGR 572 MA TQASLF P ++APWKQS SFS + LK T I+AMAE T K AP GFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHP+DGVYPEKV P R+ +G+ Sbjct: 1 MAMATQASLFTPPLSVPKSTTAPWKQSLVSFSTPKQLKSTVSVTRPIRAMAEEAPAATEEKPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQ 184 HSP 2 Score: 59.6918 bits (143), Expect = 1.275e-82 Identity = 26/33 (78.79%), Postives = 31/33 (93.94%), Query Frame = 2 Query: 545 DPGKEGVGQNYRSIGKNVSPIEVKFTGKQMYDL 643 +PG+EGVGQN+RSIGKN S IEVKFTGKQ+YD+ Sbjct: 176 NPGREGVGQNFRSIGKNKSAIEVKFTGKQVYDI 208
BLAST of EY702369 vs. ExPASy Swiss-Prot
Match: PSAD_SPIOL (Photosystem I reaction center subunit II, chloroplastic OS=Spinacia oleracea GN=psaD PE=1 SV=2) HSP 1 Score: 261.151 bits (666), Expect = 4.407e-80 Identity = 138/190 (72.63%), Postives = 156/190 (82.11%), Query Frame = 3 Query: 30 MAATTQASLFAPANFST-----TKSSAPWKQSSS--FSVRPL-KHNAPRTNTIKAMAEGKTE--TPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPQDGVYPEKVTPERKELG 569 MA TQA+LF+P++ S+ T+ + +KQ S+ F+ +P +H++ R A AEGK T TKEAP GFTPPELDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHP+DGVYPEKV P R+ +G Sbjct: 1 MAMATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFASKPASRHHSIRA---AAAAEGKAAAATETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVG 187 HSP 2 Score: 59.3066 bits (142), Expect = 4.407e-80 Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 2 Query: 545 DPGKEGVGQNYRSIGKNVSPIEVKFTGKQMYDL 643 +PG++GVG N RSIGKNVSPIEVKFTGKQ YDL Sbjct: 180 NPGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
BLAST of EY702369 vs. ExPASy Swiss-Prot
Match: PSAD_HORVU (Photosystem I reaction center subunit II, chloroplastic OS=Hordeum vulgare GN=psaD PE=1 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.062e-69 Identity = 124/188 (65.96%), Postives = 135/188 (71.81%), Query Frame = 3 Query: 30 MAATTQASL----FAPANFSTTKSSAPWKQSSSFSVR---PLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPQDGVYPEKVTPERKELGR 572 MA TQAS A +S + P + S R PL AP T A P + AP GF PP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMREGPNLLKLARKEQCLALG RLRSKYKI YQFYRVFPNGEVQYLHP+DGVYPEKV R+ +G+ Sbjct: 1 MAMATQASAATRHLITAAWSPSAKPRPATLAMPSSARGPAPLFAAAPDTPAPAA-------PPAEPAPAGFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGRQGVGQ 181 HSP 2 Score: 56.6102 bits (135), Expect = 1.062e-69 Identity = 24/31 (77.42%), Postives = 29/31 (93.55%), Query Frame = 2 Query: 551 GKEGVGQNYRSIGKNVSPIEVKFTGKQMYDL 643 G++GVGQN+RSIGKNVSPIEVKFTGK +D+ Sbjct: 175 GRQGVGQNFRSIGKNVSPIEVKFTGKNSFDI 205
BLAST of EY702369 vs. ExPASy Swiss-Prot
Match: PSAD2_ARATH (Photosystem I reaction center subunit II-2, chloroplastic OS=Arabidopsis thaliana GN=psaD2 PE=1 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.315e-65 Identity = 128/179 (71.51%), Postives = 139/179 (77.65%), Query Frame = 3 Query: 36 ATTQASLFAPANFSTTKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPT-KEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPQDGVYPEKVTPERKELG 569 AT A +F+PA +TT S+ S S RP + +T E + P KEAPVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHP+DGVYPEK P R+ +G Sbjct: 2 ATQAAGIFSPA-ITTTTSAVKKLHLFSSSHRPKSLSFTKTAIRAEKTESSSAAPAVKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVG 179
BLAST of EY702369 vs. ExPASy Swiss-Prot
Match: PSAD1_ARATH (Photosystem I reaction center subunit II-1, chloroplastic OS=Arabidopsis thaliana GN=psaD1 PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 6.497e-63 Identity = 128/184 (69.57%), Postives = 138/184 (75.00%), Query Frame = 3 Query: 36 ATTQASLFAPANFSTTKSSAPWKQSSSFSV--RP----LKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPQDGVYPEKVTPERKELG 569 AT A +F A TT +++ K+ FS RP A R + A TKEAPVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHP+DGVYPEK P R+ +G Sbjct: 2 ATQAAGIFNSA--ITTAATSGVKKLHFFSTTHRPKSLSFTKTAIRAEKTDSSAAAAAAPATKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVG 183
BLAST of EY702369 vs. ExPASy Swiss-Prot
Match: PSAD_CHLRE (Photosystem I reaction center subunit II, chloroplastic OS=Chlamydomonas reinhardtii GN=psaD PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 9.248e-53 Identity = 99/160 (61.88%), Postives = 118/160 (73.75%), Query Frame = 3 Query: 81 TKSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPV-GFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPQDGVYPEKVTPER 557 T++ A + SS +V + A R ++A AE K A +T P L+P+TPSPIFGGSTGGLLRKAQ EEFYVITWE+ KEQIFEMPTGGAAIMR+GPNLLK +KEQCLAL T+LR+K+K+ FYRVFP+G+VQYLHP DGVYPEKV R Sbjct: 7 TQAPAATRASSRVAVAA-RPAARRAVVVRAEAEAAPAAAKKAAEKPAWTVPTLNPDTPSPIFGGSTGGLLRKAQTEEFYVITWEAKKEQIFEMPTGGAAIMRQGPNLLKFGKKEQCLALTTQLRNKFKLTPCFYRVFPDGKVQYLHPADGVYPEKVNAGR 165 HSP 2 Score: 40.817 bits (94), Expect = 9.248e-53 Identity = 18/33 (54.55%), Postives = 24/33 (72.73%), Query Frame = 2 Query: 551 GKEGVGQNYRSIGKNVSPIEVKFTGKQMYDLEI 649 G+ G QN R IG+NV+PI+VKF+G+ M EI Sbjct: 164 GRVGANQNMRRIGQNVNPIKVKFSGRMMSPAEI 196
BLAST of EY702369 vs. ExPASy Swiss-Prot
Match: PSAD_CYAPA (Photosystem I reaction center subunit II, cyanelle OS=Cyanophora paradoxa GN=psaD PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.162e-46 Identity = 93/176 (52.84%), Postives = 116/176 (65.91%), Query Frame = 3 Query: 75 STTKSSAPWKQSSSF------SVRPLKHNAPRTNTIKAMAEGKTETPTKE----APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPQDGVYPEKVTPERKELG 569 S T SSA Q +F + + AP ++A E E AP F+ P L+ N P+PIFGGSTGGLLRKA+VEEFY ITW E +FE+PTGGAAIMR G NLL+LARKEQC+ALG +L+ K+KI Y+ YRV+P+GEVQ+LHP+DGV+PEKV P R +G Sbjct: 16 SATLSSAVCAQKKAFFGAQVAAKKTTFEAAPARFIVRAEEEEAAPAEKVEKKAAAPKPFSVPTLNLNAPTPIFGGSTGGLLRKAEVEEFYSITWTGKSETVFELPTGGAAIMRAGENLLRLARKEQCIALGAQLKDKFKITDYKIYRVYPSGEVQFLHPKDGVFPEKVNPGRVAVG 191 HSP 2 Score: 36.965 bits (84), Expect = 1.162e-46 Identity = 14/35 (40.00%), Postives = 24/35 (68.57%), Query Frame = 2 Query: 545 DPGKEGVGQNYRSIGKNVSPIEVKFTGKQMYDLEI 649 +PG+ VG N R IG+N P ++KF G++ +D ++ Sbjct: 184 NPGRVAVGSNKRRIGQNPDPAKLKFKGQETFDSDL 218
BLAST of EY702369 vs. ExPASy Swiss-Prot
Match: PSAD_PORPU (Photosystem I reaction center subunit II OS=Porphyra purpurea GN=psaD PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.761e-41 Identity = 75/118 (63.56%), Postives = 88/118 (74.58%), Query Frame = 3 Query: 225 PPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPQDGVYPEKVTPERKELGRI 575 P ++ N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR+G NLL LA+KEQCLALGT+L+ K+KI Y+ YRVFPNGEVQYLHP+DGV+PEKV R + + Sbjct: 2 PDTINLNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRDGENLLYLAKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRASINSV 119 HSP 2 Score: 35.8094 bits (81), Expect = 1.761e-41 Identity = 16/30 (53.33%), Postives = 19/30 (63.33%), Query Frame = 2 Query: 551 GKEGVGQNYRSIGKNVSPIEVKFTGKQMYD 640 G+ + SIGKNV+PI VKFT K YD Sbjct: 112 GRASINSVDHSIGKNVNPINVKFTNKATYD 141 The following BLAST results are available for this feature:
BLAST of EY702369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702369 ID=EY702369; Name=EY702369; organism=Citrus sinensis; type=EST; length=905bpback to top |