EY683921
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY683921 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.923e-15 Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 2 Query: 92 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQY 199 GK AQQ+N+PVPEGCTDP AENFDPTARSDDG+C Y Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472 HSP 2 Score: 31.5722 bits (70), Expect = 2.923e-15 Identity = 14/18 (77.78%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 1 AALGEANADAIQSGNFYG 54 AALG+ANADAI G FYG Sbjct: 420 AALGDANADAIGRGTFYG 437
BLAST of EY683921 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.787e-14 Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 89 GGKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQY 199 GG+AAQQ+ NVPVPEGCTDP A N+DPTARSDDGSC Y Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474 HSP 2 Score: 30.4166 bits (67), Expect = 8.787e-14 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 1 Query: 1 AALGEANADAIQSGNFYG 54 AALG+AN DAI+ G FYG Sbjct: 420 AALGDANNDAIKRGTFYG 437
BLAST of EY683921 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 1.142e-13 Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 2 Query: 92 GKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQYT 202 G+ AQQ N+PVPEGCTDP A+NFDPTARSDDGSC YT Sbjct: 428 GQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465 HSP 2 Score: 31.5722 bits (70), Expect = 1.142e-13 Identity = 12/18 (66.67%), Postives = 18/18 (100.00%), Query Frame = 1 Query: 1 AALGEANADAIQSGNFYG 54 AALG+AN+DA+++G+FYG Sbjct: 411 AALGDANSDAMKTGSFYG 428
BLAST of EY683921 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.221e-13 Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 2 Query: 92 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYTL 205 GKAAQQ+++PV +GCTDP A+N+DPTARSDDGSC Y L Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472 HSP 2 Score: 28.8758 bits (63), Expect = 4.221e-13 Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 1 AALGEANADAIQSGNFYG 54 AALG+AN DAI G F+G Sbjct: 418 AALGDANKDAIDRGTFFG 435
BLAST of EY683921 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 4.223e-13 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 92 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYT 202 GK AQQ +PVPEGCTD A+N+DPTARSDDGSC YT Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463 HSP 2 Score: 30.8018 bits (68), Expect = 4.223e-13 Identity = 12/18 (66.67%), Postives = 17/18 (94.44%), Query Frame = 1 Query: 1 AALGEANADAIQSGNFYG 54 AALG+AN DA+++G+FYG Sbjct: 410 AALGDANQDAMKTGSFYG 427 The following BLAST results are available for this feature:
BLAST of EY683921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY683921 ID=EY683921; Name=EY683921; organism=Citrus sinensis; type=EST; length=477bpback to top |