EY702293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702293 vs. ExPASy Swiss-Prot
Match: C3H33_ORYSJ (Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 1.885e-13 Identity = 36/92 (39.13%), Postives = 51/92 (55.43%), Query Frame = 3 Query: 540 PLLGDHLNPFGIDTSGGLAAGILNSRSPAFSKRNQSFIQR-NTVNRHSGVSSPNSTAAVMPSKLARLGSP*WKMGMGPSTKRSEKLPESSSF 812 P++G FG+D S +A I++SR+ AF+KR+QSFI R + SP +T A PS L+ GSP K+ G KL +S+SF Sbjct: 465 PMVGGANTAFGLDHS--MAKAIMSSRASAFAKRSQSFIDRGGRAPAARSLMSPATTGA--PSILSDWGSPDGKLDWGVQGDELHKLRKSASF 552 HSP 2 Score: 46.595 bits (109), Expect = 1.885e-13 Identity = 32/109 (29.36%), Postives = 53/109 (48.62%), Query Frame = 2 Query: 137 IAPPTLQLPGSRLKSARNARDMEFDMELLGLENRRRQQQLIDEISSLSSP-SGWXXXXXXXXXXXXXXDRTGDMNRIGGVKPT----NLDDIFGSLNPTLMPQLQGTSL 448 ++P P SRLK+A AR+++FD+E+L L+ + QQ+L D++S SP + W N + P + D+ GS++P ++ QL SL Sbjct: 351 MSPAWPSSPASRLKTALGARELDFDLEMLALD--QYQQKLFDKVSGAPSPRASWG----------------AAANGLATASPARAVPDYTDLLGSVDPAMLSQLHALSL 441
BLAST of EY702293 vs. ExPASy Swiss-Prot
Match: C3H29_ARATH (Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis thaliana GN=At2g40140 PE=2 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 5.629e-12 Identity = 39/115 (33.91%), Postives = 52/115 (45.22%), Query Frame = 2 Query: 110 GGTMWNQPN-IAPPTLQLPGSRLKSARNARDMEFDMEL--LGLENRRRQQQLIDEISSLSSPSGWXXXXXXXXXXXXXXDRTGDMNRIGGVKPTNLDDIFGSLNPTLMPQLQGTS 445 GG N+ N + PP LQL GSRLKS +ARDM+ +MEL GL+NR R+G +KP+NL++ FGS + + QLQ S Sbjct: 366 GGLWQNRVNSLTPPPLQLNGSRLKSTLSARDMDMEMELRFRGLDNR----------------------------------------RLGDLKPSNLEETFGSYDSASVMQLQSPS 440 HSP 2 Score: 40.0466 bits (92), Expect = 5.629e-12 Identity = 27/85 (31.76%), Postives = 40/85 (47.06%), Query Frame = 3 Query: 564 PFGIDTSGGLAAGILNSRSPAFSKRNQSFIQRNTVNRHSGVSSPNSTAAVMPSKLARLGSP*WKMGMGPSTKRSEKLPESSSFWI 818 P G ++S +AA ++N+RS AF+KR+ SF A + S ++ GSP K+ G KL S+SF I Sbjct: 458 PHGFESSAAMAAAVMNARSSAFAKRSLSF-----------------KPAPVASNVSDWGSPNGKLEWGMQRDELNKLRRSASFGI 525 The following BLAST results are available for this feature:
BLAST of EY702293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702293 ID=EY702293; Name=EY702293; organism=Citrus sinensis; type=EST; length=845bpback to top |