EY702286

Overview
NameEY702286
Unique NameEY702286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9974 contig Csv1_Contig9974:1..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702286 vs. ExPASy Swiss-Prot
Match: SST2_SCHPO (AMSH-like protease sst2 OS=Schizosaccharomyces pombe GN=sst2 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.546e-35
Identity = 68/148 (45.95%), Postives = 102/148 (68.92%), Query Frame = 2
Query:  416 LQDVHISAQLMEDFLELAKENTDKDLETCGVLGAFLENGTFYVTTLIIPKQDSTSSSCQALNEEDVFAIQNERSLFPMGWIHTHPSQSWFMSSVDLHTHYSYQMMVPEAFAIVLAPPDSSRSYGIFQLTEPSGMSVLKECQETGFILP 859
            L+ +++   L + FL++ K NT K+LETCG+L   L    F++T L+IP Q++TS +C   +E  +F  Q++ +L  +GWIHTHP+Q+ FMSSVDLHTH SYQ+M+PEA AIV+AP  S  + GIF+L +P G+  + +C++ G   P
Sbjct:  260 LRTIYLPKLLKKVFLDVVKPNTKKNLETCGILCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLFEFQDKHNLLTLGWIHTHPTQTCFMSSVDLHTHCSYQLMLPEAIAIVMAP--SKNTSGIFRLLDPEGLQTIVKCRKPGLFHP 405          
BLAST of EY702286 vs. ExPASy Swiss-Prot
Match: D1039_DICDI (Probable ubiquitin thiolesterase DG1039 OS=Dictyostelium discoideum GN=DG1039 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.695e-34
Identity = 65/175 (37.14%), Postives = 112/175 (64.00%), Query Frame = 2
Query:  338 QGALVTHVSVADSDKQSNTEPSVSNV----LQDVHISAQLMEDFLELAKENTDKDLETCGVLGAFLENGTFYVTTLIIPKQDSTSSSCQALNEEDVFAIQNERSLFPMGWIHTHPSQSWFMSSVDLHTHYSYQMMVPEAFAIVLAPPDSSRSYGIFQLTEPSGMSVLKECQETGF 850
            Q   V   S+  +  + N + S ++     L+ + +  ++ ++F+ LA+ NT + +ETCG+L   L N  F +TT+IIPKQ+ T+ +C  + E ++F  Q E  L  +GWIHTHP+Q  F+S+VD+HTH SYQ ++ EA A+V++P  ++ ++GIF+LT+P G+  +++C+   F
Sbjct:  504 QSPAVNTPSITPTTNKPNIDSSEASKKYSKLRKIIVHGEVFQEFMRLAENNTKRSIETCGILSGTLSNDVFRITTIIIPKQEGTTDTCNTIEEHEIFEYQLENDLLTLGWIHTHPTQDCFLSAVDVHTHCSYQYLLQEAIAVVISPM-ANPNFGIFRLTDPPGLETVQKCKLKSF 677          
BLAST of EY702286 vs. ExPASy Swiss-Prot
Match: STABP_DANRE (STAM-binding protein-like OS=Danio rerio GN=stambp PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.848e-31
Identity = 75/188 (39.89%), Postives = 108/188 (57.45%), Query Frame = 2
Query:  308 PVLFLTAKAPQGALVTHVSVADSDKQSNTEPSVS-------NVLQDVHISAQLMEDFLELAKENTDKDLETCGVLGAFLENGTFYVTTLIIPKQDSTSSSCQALNEEDVFAIQNERSLFPMGWIHTHPSQSWFMSSVDLHTHYSYQMMVPEAFAIVLAPPDSSRSYGIFQLTEPSGMSVLKECQETGF 850
            P   L+ + P      H  +   D+       VS       N L+ + + A+L + FL+LA+ NT + +ETCG+L   L    F VT +I+PKQ      C   NEE++F IQ++  L  +GWIHTHP+Q+ F+SSVDLHTH SYQMM+PE+ AIV +P  +   Y  F+LT+  GM  +  C++ GF
Sbjct:  205 PQASLSPQTPPAGATNHQGLPAFDRSLKPSVPVSAGHSALVNGLRQLFVPAELCQRFLKLAETNTARAVETCGILCGKLMKNAFTVTHVIVPKQCGGPDYCDTENEEELFLIQDQNDLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPKFNETGY--FRLTD-YGMDDVGTCKQRGF 389          
BLAST of EY702286 vs. ExPASy Swiss-Prot
Match: STABP_XENLA (STAM-binding protein-like OS=Xenopus laevis GN=stambp PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.858e-31
Identity = 71/163 (43.56%), Postives = 103/163 (63.19%), Query Frame = 2
Query:  362 SVADSDKQSNTEPSVSNVLQDVHISAQLMEDFLELAKENTDKDLETCGVLGAFLENGTFYVTTLIIPKQDSTSSSCQALNEEDVFAIQNERSLFPMGWIHTHPSQSWFMSSVDLHTHYSYQMMVPEAFAIVLAPPDSSRSYGIFQLTEPSGMSVLKECQETGF 850
            S+  S   SN+    S+ L+ V I   +   FL+L++ NT + +ETCG+L   L    F VT +I+PKQ      C   +EE++F IQ+++ L  +GWIHTHP+Q+ F+SSVDLHTH SYQMM+PE+ AIV +P    +  G F+LT+  GM  + EC++ GF
Sbjct:  228 SLKPSSYGSNSSGVTSDGLRHVKIPRDVCCKFLQLSENNTQRGVETCGILCGKLLQNEFTVTHVIVPKQSGGPDYCNTESEEELFLIQDQQGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP--KFQETGFFKLTD-YGMKEIGECRQKGF 387          
BLAST of EY702286 vs. ExPASy Swiss-Prot
Match: STABP_HUMAN (STAM-binding protein OS=Homo sapiens GN=STAMBP PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31
Identity = 70/157 (44.59%), Postives = 103/157 (65.61%), Query Frame = 2
Query:  386 SNTE--PSVSNVLQDVHISAQLMEDFLELAKENTDKDLETCGVLGAFLENGTFYVTTLIIPKQDSTSSSCQALNEEDVFAIQNERSLFPMGWIHTHPSQSWFMSSVDLHTHYSYQMMVPEAFAIVLAPPDSSRSYGIFQLTEPSGMSVLKECQETGF 850
            SN+E  P++   L+ V +  +L   FL+LA  NT + +ETCG+L   L    F +T ++IPKQ + S  C   NEE++F IQ+++ L  +GWIHTHP+Q+ F+SSVDLHTH SYQMM+PE+ AIV +P    +  G F+LT+  G+  +  C++ GF
Sbjct:  243 SNSESIPTIDG-LRHVVVPGRLCPQFLQLASANTARGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEEELFLIQDQQGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP--KFQETGFFKLTD-HGLEEISSCRQKGF 395          
BLAST of EY702286 vs. ExPASy Swiss-Prot
Match: STABP_RAT (STAM-binding protein OS=Rattus norvegicus GN=Stambp PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.197e-29
Identity = 64/145 (44.14%), Postives = 94/145 (64.83%), Query Frame = 2
Query:  416 LQDVHISAQLMEDFLELAKENTDKDLETCGVLGAFLENGTFYVTTLIIPKQDSTSSSCQALNEEDVFAIQNERSLFPMGWIHTHPSQSWFMSSVDLHTHYSYQMMVPEAFAIVLAPPDSSRSYGIFQLTEPSGMSVLKECQETGF 850
            L+ + +   L  +FL+LA  NT K +ETCGVL   L    F +T ++IP+Q+     C   NEE++F +Q++  L  +GWIHTHP+Q+ F+SSVDLHTH SYQMM+PE+ AIV +P    +  G F+LT+  G+  +  C++ GF
Sbjct:  254 LRHIVVPRNLCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFMQDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP--KFQETGFFKLTD-YGLQEISTCRQKGF 395          
BLAST of EY702286 vs. ExPASy Swiss-Prot
Match: STABP_MOUSE (STAM-binding protein OS=Mus musculus GN=Stambp PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.197e-29
Identity = 64/145 (44.14%), Postives = 94/145 (64.83%), Query Frame = 2
Query:  416 LQDVHISAQLMEDFLELAKENTDKDLETCGVLGAFLENGTFYVTTLIIPKQDSTSSSCQALNEEDVFAIQNERSLFPMGWIHTHPSQSWFMSSVDLHTHYSYQMMVPEAFAIVLAPPDSSRSYGIFQLTEPSGMSVLKECQETGF 850
            L+ + +   L  +FL+LA  NT K +ETCGVL   L    F +T ++IP+Q+     C   NEE++F +Q++  L  +GWIHTHP+Q+ F+SSVDLHTH SYQMM+PE+ AIV +P    +  G F+LT+  G+  +  C++ GF
Sbjct:  254 LRHIVVPRNLCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFMQDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP--KFQETGFFKLTD-YGLQEISTCRQKGF 395          
BLAST of EY702286 vs. ExPASy Swiss-Prot
Match: STALP_HUMAN (AMSH-like protease OS=Homo sapiens GN=STAMBPL1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.041e-29
Identity = 65/145 (44.83%), Postives = 95/145 (65.52%), Query Frame = 2
Query:  416 LQDVHISAQLMEDFLELAKENTDKDLETCGVLGAFLENGTFYVTTLIIPKQDSTSSSCQALNEEDVFAIQNERSLFPMGWIHTHPSQSWFMSSVDLHTHYSYQMMVPEAFAIVLAPPDSSRSYGIFQLTEPSGMSVLKECQETGF 850
            L+ V +   L   FL+LA+ NT + +ETCG+L   L +  F +T +I+PKQ +    C   N E++F +Q++  L  +GWIHTHP+Q+ F+SSVDLHTH SYQ+M+PEA AIV +P    +  GIF+LT  +GM  +  C++ GF
Sbjct:  266 LRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSP--KHKDTGIFRLTN-AGMLEVSACKKKGF 407          
BLAST of EY702286 vs. ExPASy Swiss-Prot
Match: STALP_MOUSE (AMSH-like protease OS=Mus musculus GN=Stambpl1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.666e-29
Identity = 69/161 (42.86%), Postives = 101/161 (62.73%), Query Frame = 2
Query:  380 KQSNTEPSVSNV----LQDVHISAQLMEDFLELAKENTDKDLETCGVLGAFLENGTFYVTTLIIPKQDSTSSSCQALNEEDVFAIQNERSLFPMGWIHTHPSQSWFMSSVDLHTHYSYQMMVPEAFAIVLAPPDSSRSYGIFQLTEPSGMSVLKECQETGF 850
            K + T  +V N+    L+ V +S  L   FL LA  NT + +ETCG+L   L +  F +T +++PKQ +    C   N E++F +Q++  L  +GWIHTHP+Q+ F+SSVDLHTH SYQ+M+PEA AIV +P    +  GIF+LT  +GM  +  C++ GF
Sbjct:  250 KPAATLSAVQNLVVEGLRCVVLSRDLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEELFNVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSP--KHKDTGIFRLTN-AGMLEVSTCKKKGF 407          
BLAST of EY702286 vs. ExPASy Swiss-Prot
Match: STALP_PONAB (AMSH-like protease OS=Pongo abelii GN=STAMBPL1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.323e-28
Identity = 64/145 (44.14%), Postives = 94/145 (64.83%), Query Frame = 2
Query:  416 LQDVHISAQLMEDFLELAKENTDKDLETCGVLGAFLENGTFYVTTLIIPKQDSTSSSCQALNEEDVFAIQNERSLFPMGWIHTHPSQSWFMSSVDLHTHYSYQMMVPEAFAIVLAPPDSSRSYGIFQLTEPSGMSVLKECQETGF 850
            L+ V +   L   FL+LA+ NT + +ETCG+L   L +  F +T +I+PKQ +    C   N E++F +Q++  L  +GWIHTHP+Q+ F+SSVDLHTH SYQ+M+ EA AIV +P    +  GIF+LT  +GM  +  C++ GF
Sbjct:  266 LRCVVLPKDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDVENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLSEAIAIVCSP--KHKDTGIFRLTN-AGMLEVSACKKKGF 407          
The following BLAST results are available for this feature:
BLAST of EY702286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
SST2_SCHPO5.546e-3545.95AMSH-like protease sst2 OS=Schizosaccharomyces pom... [more]
D1039_DICDI4.695e-3437.14Probable ubiquitin thiolesterase DG1039 OS=Dictyos... [more]
STABP_DANRE2.848e-3139.89STAM-binding protein-like OS=Danio rerio GN=stambp... [more]
STABP_XENLA4.858e-3143.56STAM-binding protein-like OS=Xenopus laevis GN=sta... [more]
STABP_HUMAN6.345e-3144.59STAM-binding protein OS=Homo sapiens GN=STAMBP PE=... [more]
STABP_RAT1.197e-2944.14STAM-binding protein OS=Rattus norvegicus GN=Stamb... [more]
STABP_MOUSE1.197e-2944.14STAM-binding protein OS=Mus musculus GN=Stambp PE=... [more]
STALP_HUMAN2.041e-2944.83AMSH-like protease OS=Homo sapiens GN=STAMBPL1 PE=... [more]
STALP_MOUSE2.666e-2942.86AMSH-like protease OS=Mus musculus GN=Stambpl1 PE=... [more]
STALP_PONAB1.323e-2844.14AMSH-like protease OS=Pongo abelii GN=STAMBPL1 PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-C07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702286 ID=EY702286; Name=EY702286; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGAAAAGTTTATTGAGTTCCAGGAACTGTATAAAAGGTGC
TCACACCCGATTCCTGCCCATTCTCTGCTGCAGCAAAAAGCACATGATTA
AGTGACCAACCAAACAAGTCTTTCGATCTTTATCAACCTTAAGGACCATC
AATGAAGAAATCGCCGGGTTGCTAACTTTCTTCAGTTGATTCTATAAGTA
GTTGCTTTCCATGTGAAAATCTTTCTCCAATGTCCCTTCATACAATAAGT
GAATGGCCATGTGCTGGCCGTGTCACTGCTCATGCTGTTACTCTGTCTTC
TCCTTCTCCTGTACTCTTCTTGACAGCGAAAGCACCTCAAGGTGCACTTG
TTACTCATGTTTCTGTTGCTGATTCTGATAAGCAATCGAACACTGAGCCA
TCAGTGTCTAATGTCCTGCAAGATGTACATATATCAGCTCAGTTGATGGA
AGATTTTCTTGAACTTGCAAAAGAAAACACAGATAAGGATCTGGAAACCT
GTGGTGTTCTCGGTGCTTTTCTAGAAAATGGGACTTTTTATGTGACCACT
TTGATTATACCCAAACAGGATTCAACTTCCAGTTCTTGTCAGGCTCTAAA
TGAGGAGGATGTTTTTGCCATACAAAATGAACGATCTCTTTTTCCTATGG
GATGGATTCATACACATCCATCTCAGAGTTGGTTCATGTCTTCAGTAGAT
CTGCACACCCACTACTCATATCAGATGATGGTACCTGAGGCTTTTGCCAT
TGTCTTGGCTCCCCCTGATTCCTCAAGAAGCTATGGCATATTTCAACTAA
CTGAACCCAGTGGAATGAGTGTACTGAAAGAGTGTCAAGAGACGGGATTC
ATCCTCCCAAAAACCAGCTGATGGGAGCCCTATTTCGG
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