EY702280

Overview
NameEY702280
Unique NameEY702280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702280 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 6.496e-88
Identity = 164/194 (84.54%), Postives = 170/194 (87.63%), Query Frame = 2
Query:   11 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVESKLGLEEEKLRATRPVLSEYGNMSSACVLLLLDEMRERPAAEAKAPTGEGLQWGVLVQVAPG 592
            GARVLVVCSEITAVTFRGPADTHLDSLVGQALF            PDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAP+GISDWNSIFWIAHPGGPAILDQVESKLGL+ EKL+ATR VLSEYGNMSSACVL +LDEMR++   EAKA TGEGL WGVL    PG
Sbjct:  183 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESKLGLKGEKLKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPG 376          
BLAST of EY702280 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.769e-85
Identity = 158/194 (81.44%), Postives = 166/194 (85.57%), Query Frame = 2
Query:   11 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVESKLGLEEEKLRATRPVLSEYGNMSSACVLLLLDEMRERPAAEAKAPTGEGLQWGVLVQVAPG 592
            GARVLVVCSEITAVTFRGPADTHLDSLVGQALF            PD S+ERPLYQLVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNSIFWIAHPGGPAILDQVE+KLGL+EEKLRATR VLSEYGNMSSACVL +LDEMR+  A E +A TGEGL WGVL    PG
Sbjct:  185 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADPDESIERPLYQLVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSIFWIAHPGGPAILDQVEAKLGLKEEKLRATRQVLSEYGNMSSACVLFILDEMRKNCAEEGRATTGEGLDWGVLFGFGPG 378          
BLAST of EY702280 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.941e-85
Identity = 157/194 (80.93%), Postives = 167/194 (86.08%), Query Frame = 2
Query:   11 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVESKLGLEEEKLRATRPVLSEYGNMSSACVLLLLDEMRERPAAEAKAPTGEGLQWGVLVQVAPG 592
            GARVLVVCSEITAVTFRGPADTHLDSLVGQALF            P+ S+ERPLYQLVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNSIFWIAHPGGPAILDQVE+KLGL+EEKLRATR VLSEYGNMSSACVL +LDEMR++ A E +A TGEGL WGVL    PG
Sbjct:  185 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADPNESIERPLYQLVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSIFWIAHPGGPAILDQVEAKLGLKEEKLRATRQVLSEYGNMSSACVLFILDEMRKKCAEEGRATTGEGLDWGVLFGFGPG 378          
BLAST of EY702280 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.691e-84
Identity = 156/194 (80.41%), Postives = 164/194 (84.54%), Query Frame = 2
Query:   11 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVESKLGLEEEKLRATRPVLSEYGNMSSACVLLLLDEMRERPAAEAKAPTGEGLQWGVLVQVAPG 592
            GARVLVVCSEITAVTFRGP DTHLDSLVGQALF            PD S+ERPLYQLVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNSIFWIAHPGGPAILDQVE KL L+EEKLRATR VLSEYGNMSSACVL +LDEMR++ A E  A TGEGL+WGVL    PG
Sbjct:  185 GARVLVVCSEITAVTFRGPVDTHLDSLVGQALFGDGAAAVIVGADPDESIERPLYQLVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSIFWIAHPGGPAILDQVEEKLELKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKCAEEGMATTGEGLEWGVLFGFGPG 378          
BLAST of EY702280 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 310.457 bits (794), Expect = 7.432e-84
Identity = 154/194 (79.38%), Postives = 165/194 (85.05%), Query Frame = 2
Query:   11 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVESKLGLEEEKLRATRPVLSEYGNMSSACVLLLLDEMRERPAAEAKAPTGEGLQWGVLVQVAPG 592
            GARVLVVCSEITAVTFRGP DTHLDSLVGQALF            PDTSVERPL++L+S +QTILPDSDGAIDGHLREVGLTFHLLKDVPG+ISKNIEKSL+EAFAP+GISDWNS+FWIAHPGGPAILDQVESKLGL+EEKLRATR VLSEYGNMSSACVL +LDEMR       K  TGEGL+WGVL    PG
Sbjct:  183 GARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGADPDTSVERPLFELISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLAEAFAPLGISDWNSLFWIAHPGGPAILDQVESKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRRNSLEGGKVTTGEGLEWGVLFGFGPG 376          
BLAST of EY702280 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.162e-83
Identity = 152/195 (77.95%), Postives = 166/195 (85.13%), Query Frame = 2
Query:    8 SGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVESKLGLEEEKLRATRPVLSEYGNMSSACVLLLLDEMRERPAAEAKAPTGEGLQWGVLVQVAPG 592
            +GARVLVVCSEITAVTFRGP+D+HLDSLVGQALF            PD SVERPL+QL+S +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQVE KLGL+EEK+RATR VLS+YGNMSSACVL +LDEMR++   E KA TGEGL WGVL    PG
Sbjct:  187 AGARVLVVCSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVILGSDPDLSVERPLFQLISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATTGEGLDWGVLFGFGPG 381          
BLAST of EY702280 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 4.817e-83
Identity = 151/195 (77.44%), Postives = 166/195 (85.13%), Query Frame = 2
Query:    8 SGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVESKLGLEEEKLRATRPVLSEYGNMSSACVLLLLDEMRERPAAEAKAPTGEGLQWGVLVQVAPG 592
            +GARVLVVCSEITAVTFRGP+D+HLDSLVGQALF            PD SVERPL+QL+S +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQVE KLGL+EEK+RATR VLS+YGNMSSACVL +LDEMR++   E KA TG+GL WGVL    PG
Sbjct:  186 TGARVLVVCSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVIVGSDPDLSVERPLFQLISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATTGDGLDWGVLFGFGPG 380          
BLAST of EY702280 vs. ExPASy Swiss-Prot
Match: CHSY_VITVI (Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 4.078e-82
Identity = 150/195 (76.92%), Postives = 165/195 (84.62%), Query Frame = 2
Query:    8 SGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVESKLGLEEEKLRATRPVLSEYGNMSSACVLLLLDEMRERPAAEAKAPTGEGLQWGVLVQVAPG 592
            +G+RVLVVCSEITAVTFRGP+DTHLDSLVGQALF            PDT +E PL++LVS +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQVE KLGL+EEKLRATR VLSEYGNMSSACVL +LDEMR++   E K  TGEGL+WGVL    PG
Sbjct:  182 AGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIELPLFELVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPG 376          
BLAST of EY702280 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.550e-81
Identity = 151/194 (77.84%), Postives = 165/194 (85.05%), Query Frame = 2
Query:   11 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVESKLGLEEEKLRATRPVLSEYGNMSSACVLLLLDEMRERPAAEAKAPTGEGLQWGVLVQVAPG 592
            GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   VE+PL++LVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL+EAF P+GISDWNS+FWIAHPGGPAILDQVE KLGL+EEKLRATR VLSEYGNMSSACVL +LDEMR++ AA+    TGEGL+WGVL    PG
Sbjct:  183 GARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIVGSDPIPEVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLAEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAADGLKTTGEGLEWGVLFGFGPG 376          
BLAST of EY702280 vs. ExPASy Swiss-Prot
Match: CHSY_ARAAL (Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.889e-81
Identity = 150/195 (76.92%), Postives = 166/195 (85.13%), Query Frame = 2
Query:   11 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVESKLGLEEEKLRATRPVLSEYGNMSSACVLLLLDEMRERPAAEAKAPTGEGLQWGVLVQVAPG 592
            GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            PDTSV E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQVE KLGL+ EK+RATR VLSEYGNMSSACVL +LDEMR++ A +  A TGEGL+WGVL    PG
Sbjct:  184 GARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKDGAATTGEGLEWGVLFGFGPG 378          
The following BLAST results are available for this feature:
BLAST of EY702280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS2_CITSI6.496e-8884.54Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHS1_RUTGR1.769e-8581.44Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]
CHS2_RUTGR3.941e-8580.93Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHS3_RUTGR5.691e-8480.41Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHSY_BETVE7.432e-8479.38Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHSY_PETCR2.162e-8377.95Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHS2_DAUCA4.817e-8377.44Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHSY_VITVI4.078e-8276.92Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV... [more]
CHS1_CAMSI1.550e-8177.84Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSY_ARAAL5.889e-8176.92Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-005-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702280 ID=EY702280; Name=EY702280; organism=Citrus sinensis; type=EST; length=818bp
CCACGCGTCCGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCGG
TCACTTTCCGCGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAG
GCTTTGTTCGGTGATGGTGCTGCTGCTGTGATCGTGGGTGCCGATCCTGA
CACGTCGGTCGAGCGTCCGTTGTATCAGCTTGTGTCGACTTCGCAGACGA
TCCTCCCTGACTCTGACGGTGCAATTGACGGACACTTGCGCGAAGTCGGT
CTCACTTTCCATTTGCTTAAAGACGTCCCCGGCTTGATCTCAAAGAATAT
AGAGAAAAGCCTGTCGGAAGCGTTCGCCCCGGTTGGCATCAGCGACTGGA
ACTCGATATTCTGGATCGCTCACCCCGGTGGGCCCGCAATTCTGGACCAA
GTGGAGTCTAAACTCGGCCTCGAAGAGGAGAAGCTGAGGGCCACACGCCC
AGTGTTGAGTGAGTACGGTAACATGTCAAGCGCTTGTGTCCTGCTCCTCC
TTGACGAGATGAGAGAGAGGCCTGCTGCGGAGGCGAAAGCCCCCACCGGC
GAAGGGCTGCAGTGGGGCGTGCTCGTCCAGGTCGCGCCTGGGGGTCTCCC
GCGACACGCGTGTGCTGCCCAATGGCCCCCTCCAGGCTTGAAGTGAGACG
TCCAGCCGGGCGGTGGACAAGGGCGCGGACTGGGTGGTGGGTGGTTTACG
TCGGCACGGGTTGGCGGATCGTGTGGACGGTTGGCGGTTGGCCCGTGGGT
TGTGGGCGCGGCGGCCTCGCCGCGTAGTAGTCGCGTCGCCGCGGCGCCCC
TTTCGTCGGTGGTGGGCG
back to top