CX077621
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077621 vs. ExPASy Swiss-Prot
Match: YCF72_ORYSJ (Uncharacterized protein ycf72 OS=Oryza sativa subsp. japonica GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.786e-40 Identity = 80/102 (78.43%), Postives = 85/102 (83.33%), Query Frame = 3 Query: 3 GFITTPLTTGRLPSQHLDPAPPKLFWFTPAFPTYPTVAEQFLDIKRTHPEGHFNVADFPSFAISFATAPAALANCPPFTSLLSMLCMDVPKGILGEVDSSCL 308 GFITTPLTTGRLPSQHLDPA PKLFWFTP PT PTVA+QF D KRT P+G+ VAD PSFAISFATAPAALANCPP ++SMLCM VPKGI EVDSS L Sbjct: 15 GFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSFL 116
BLAST of CX077621 vs. ExPASy Swiss-Prot
Match: YCF72_ORYSI (Uncharacterized protein ycf72 OS=Oryza sativa subsp. indica GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.786e-40 Identity = 80/102 (78.43%), Postives = 85/102 (83.33%), Query Frame = 3 Query: 3 GFITTPLTTGRLPSQHLDPAPPKLFWFTPAFPTYPTVAEQFLDIKRTHPEGHFNVADFPSFAISFATAPAALANCPPFTSLLSMLCMDVPKGILGEVDSSCL 308 GFITTPLTTGRLPSQHLDPA PKLFWFTP PT PTVA+QF D KRT P+G+ VAD PSFAISFATAPAALANCPP ++SMLCM VPKGI EVDSS L Sbjct: 15 GFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSFL 116
BLAST of CX077621 vs. ExPASy Swiss-Prot
Match: YCF72_ORYSA (Uncharacterized protein ycf72 OS=Oryza sativa GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.786e-40 Identity = 80/102 (78.43%), Postives = 85/102 (83.33%), Query Frame = 3 Query: 3 GFITTPLTTGRLPSQHLDPAPPKLFWFTPAFPTYPTVAEQFLDIKRTHPEGHFNVADFPSFAISFATAPAALANCPPFTSLLSMLCMDVPKGILGEVDSSCL 308 GFITTPLTTGRLPSQHLDPA PKLFWFTP PT PTVA+QF D KRT P+G+ VAD PSFAISFATAPAALANCPP ++SMLCM VPKGI EVDSS L Sbjct: 15 GFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSFL 116
BLAST of CX077621 vs. ExPASy Swiss-Prot
Match: YCF72_ORYNI (Uncharacterized protein ycf72 OS=Oryza nivara GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.786e-40 Identity = 80/102 (78.43%), Postives = 85/102 (83.33%), Query Frame = 3 Query: 3 GFITTPLTTGRLPSQHLDPAPPKLFWFTPAFPTYPTVAEQFLDIKRTHPEGHFNVADFPSFAISFATAPAALANCPPFTSLLSMLCMDVPKGILGEVDSSCL 308 GFITTPLTTGRLPSQHLDPA PKLFWFTP PT PTVA+QF D KRT P+G+ VAD PSFAISFATAPAALANCPP ++SMLCM VPKGI EVDSS L Sbjct: 15 GFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSFL 116
BLAST of CX077621 vs. ExPASy Swiss-Prot
Match: RK2_CUCSA (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.066e-39 Identity = 85/94 (90.43%), Postives = 87/94 (92.55%), Query Frame = -3 Query: 2 NMPLGTSIHNIERRLVKGGQLARAAGAVAKLIAKEGKSATLK*PSGWVRLISKNCSATVG*VGNAGVNQKSLGGAGSKCWLGKRPVVRGVVMNP 283 +MPLGT+IHNIE L KGGQLARAAGAVAKLIAKEGKSATLK PSG VRLISKNCSATVG VGNAGVNQKSLG AGSKCWLGKRPVVRGVVMNP Sbjct: 132 DMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNP 225
BLAST of CX077621 vs. ExPASy Swiss-Prot
Match: RK2A_POPAL (50S ribosomal protein L2-A, chloroplastic OS=Populus alba GN=rpl2-A PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.066e-39 Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = -3 Query: 2 SPNMPLGTSIHNIERRLVKGGQLARAAGAVAKLIAKEGKSATLK*PSGWVRLISKNCSATVG*VGNAGVNQKSLGGAGSKCWLGKRPVVRGVVMNP 289 S +MPLGT+IHNIE L +GGQLARAAGAVAKLIAKEGKSATLK PSG VRLISKNCSATVG VGNAGVNQKSLG AGSKCWLGKRPVVRGVVMNP Sbjct: 131 STDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNP 226
BLAST of CX077621 vs. ExPASy Swiss-Prot
Match: YCF72_SACOF (Uncharacterized protein ycf72 OS=Saccharum officinarum GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.819e-39 Identity = 79/102 (77.45%), Postives = 85/102 (83.33%), Query Frame = 3 Query: 3 GFITTPLTTGRLPSQHLDPAPPKLFWFTPAFPTYPTVAEQFLDIKRTHPEGHFNVADFPSFAISFATAPAALANCPPFTSLLSMLCMDVPKGILGEVDSSCL 308 GFITTPLTTGRLPSQHLDPA PKLFWFTP PT PTVA+QF D KRT P+G+ VA+ PSFAISFATAPAALANCPP ++SMLCM VPKGI EVDSS L Sbjct: 15 GFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSFL 116
BLAST of CX077621 vs. ExPASy Swiss-Prot
Match: YCF72_SACHY (Uncharacterized protein ycf72 OS=Saccharum hybrid GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.819e-39 Identity = 79/102 (77.45%), Postives = 85/102 (83.33%), Query Frame = 3 Query: 3 GFITTPLTTGRLPSQHLDPAPPKLFWFTPAFPTYPTVAEQFLDIKRTHPEGHFNVADFPSFAISFATAPAALANCPPFTSLLSMLCMDVPKGILGEVDSSCL 308 GFITTPLTTGRLPSQHLDPA PKLFWFTP PT PTVA+QF D KRT P+G+ VA+ PSFAISFATAPAALANCPP ++SMLCM VPKGI EVDSS L Sbjct: 15 GFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSFL 116
BLAST of CX077621 vs. ExPASy Swiss-Prot
Match: RK2_POPTR (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa GN=rpl2-A PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.375e-39 Identity = 84/94 (89.36%), Postives = 87/94 (92.55%), Query Frame = -3 Query: 2 NMPLGTSIHNIERRLVKGGQLARAAGAVAKLIAKEGKSATLK*PSGWVRLISKNCSATVG*VGNAGVNQKSLGGAGSKCWLGKRPVVRGVVMNP 283 +MPLGT+IHNIE L +GGQLARAAGAVAKLIAKEGKSATLK PSG VRLISKNCSATVG VGNAGVNQKSLG AGSKCWLGKRPVVRGVVMNP Sbjct: 132 DMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNP 225
BLAST of CX077621 vs. ExPASy Swiss-Prot
Match: RK2B_POPAL (50S ribosomal protein L2-B, chloroplastic OS=Populus alba GN=rpl2-B PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.375e-39 Identity = 84/94 (89.36%), Postives = 87/94 (92.55%), Query Frame = -3 Query: 2 NMPLGTSIHNIERRLVKGGQLARAAGAVAKLIAKEGKSATLK*PSGWVRLISKNCSATVG*VGNAGVNQKSLGGAGSKCWLGKRPVVRGVVMNP 283 +MPLGT+IHNIE L +GGQLARAAGAVAKLIAKEGKSATLK PSG VRLISKNCSATVG VGNAGVNQKSLG AGSKCWLGKRPVVRGVVMNP Sbjct: 132 DMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNP 225 The following BLAST results are available for this feature:
BLAST of CX077621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077621 ID=CX077621; Name=CX077621; organism=Citrus sinensis; type=EST; length=795bpback to top |