EY702259

Overview
NameEY702259
Unique NameEY702259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702259_ssr1 microsatellite EY702259_ssr1:1..12. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702259 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 5.406e-93
Identity = 171/268 (63.81%), Postives = 205/268 (76.49%), Query Frame = 2
Query:   44 NDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILQAWGGLSEKKXXXXXXXXXXXCKFDKSKIAAAGSNSVLFPLEKTK-GCNFGETGASGGGIKAVGSKNILEG 844
            N+DD +IRQVV ++    EDHLLNAEHHF+ FKSKFSK+YAT+EEHDYRF VFK+NL +AK  Q  DPTA HG+TKFSDLT SEFRRQFLGL +RLRLPA AQKAPILPT +LP DFDWR+ GAVT VKDQG+CGSCW+FS TGALEGAH+L+TG+LVSLSEQQLVDCDH CDPE++GSCDSGCNGGLMN+AFEY+L++ G + EK            CKFDKSK+ A+ SN  +  L++ +   N  + G     I A   +  + G
Sbjct:   24 NNDDFIIRQVVDNE----EDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEK--DYAYTGRDGSCKFDKSKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSG 285          
BLAST of EY702259 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 3.753e-86
Identity = 164/257 (63.81%), Postives = 191/257 (74.32%), Query Frame = 2
Query:   50 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILQAWGGLSEKKXXXXXXXXXXXCKFDKSKIAAAGSN-SVLFPLEKTKGCNFGETGASGGGIKA 817
            DD +IRQVV      +E  +L +E HFSLFK KF K YA+ EEHDYRF VFKANLRRA+R Q LDP+A HGVT+FSDLT SEFR++ LG+    +LP DA KAPILPT +LP DFDWRDHGAVT VK+QG+CGSCWSFSATGALEGA+FL+TG+LVSLSEQQLVDCDHECDPEE+ SCDSGCNGGLMNSAFEY L+  GGL +++           CK DKSKI A+ SN SV+   E+    N  + G     I A
Sbjct:   29 DDLVIRQVVGG----AEPQVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKT-GGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINA 280          
BLAST of EY702259 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 8.651e-83
Identity = 159/267 (59.55%), Postives = 190/267 (71.16%), Query Frame = 2
Query:   47 DDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILQAWGGLSEKKXXXXXXXXXXXCKFDKSKIAAAGSN-SVLFPLEKTKGCNFGETGASGGGIKAVGSKNILEG 844
            D+D +IRQVV    +++E  +L++E HF+LFK KF K Y + EEH YRF VFKANL RA R Q +DP+A HGVT+FSDLT SEFRR+ LG+    +LP DA +APILPT +LP +FDWRD GAVT VK+QG+CGSCWSFS TGALEGAHFL+TG+LVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEY L+  GGL  +K           CK D+SKI A+ SN SV+   E     N  + G     I A   +  + G
Sbjct:   25 DEDVLIRQVV----DETEPKVLSSEDHFTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKT-GGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGG 286          
BLAST of EY702259 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.479e-74
Identity = 152/271 (56.09%), Postives = 179/271 (66.05%), Query Frame = 2
Query:   50 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILQAWGGLSEKKXXXXXXXXXXXCKFDKSKIAAAGSN-SVLFPLEKTKGCNFGETGASGGGIKAVGSKNILEG 844
            +D +IRQVVP  G    D  LNAE HF  F  +F K+Y   +EH YR  VFK NLRRA+R QLLDP+A HGVTKFSDLTP+EFRR +LGL +  R     L   A +AP+LPT+ LP DFDWRDHGAV  VK+QG+CGSCWSFSA+GALEGAH+L+TG+L  LSEQQ VDCDHECD  E  SCDSGCNGGLM +AF Y+ +A G  SEK            CKFDKSKI A+  N SV+   E     N  + G    GI A   +  + G
Sbjct:   24 EDPLIRQVVP--GGDDNDLELNAESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEK--DYPYTGSDGKCKFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGG 290          
BLAST of EY702259 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.156e-41
Identity = 96/227 (42.29%), Postives = 128/227 (56.39%), Query Frame = 2
Query:  110 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT---NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAFEYILQAWGGLSEKKXXXXXXXXXXXCKFDKSKIAAAGSNSVLFPLEKT 766
            L  +  F  F+ KF+K Y+  EE+  RF +FK+NL + +   L+          GV KF+DL+  EF+  +L  N+      D   A  L     N +PT FDWR  GAVT VK+QG CGSCWSFS TG +EG HF+S  +LVSLSEQ LVDCDHEC + E   +CD GCNGGL  +A+ YI++  GG+  +            C F+ + I A  SN  + P  +T
Sbjct:   23 LEEQSQFLEFQDKFNKKYS-HEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLN-NKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKN-GGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNET 246          
BLAST of EY702259 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.822e-33
Identity = 80/184 (43.48%), Postives = 104/184 (56.52%), Query Frame = 2
Query:  119 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILQAWGG 649
            E  F+ FK K+ K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F    +RLR      K   + T   P   DWR+ GAVT VK QG CGSCW+FS  G +EG   ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ + GG
Sbjct:   38 EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGG 206          
BLAST of EY702259 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.211e-33
Identity = 79/186 (42.47%), Postives = 113/186 (60.75%), Query Frame = 2
Query:  113 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILQAWGGLSE 658
            N +  +  FK K+ K Y   E+ + RF +FK+N+ +A+  Q+ +  +A++GVT +SDLT  EF R  L  +    +P+     P       N++P +FDWR+ GAVT VK+QG CGSCW+FS TG +E   F  TG+L+SLSEQQLVDCD           D GCNGGL ++A+E I++  G + E
Sbjct:   15 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHLTAS--WVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGLMLE 188          
BLAST of EY702259 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.334e-33
Identity = 82/195 (42.05%), Postives = 116/195 (59.49%), Query Frame = 2
Query:  101 DHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-----NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILQAWGGLSEK 661
            +HL N +    LF+S   + SK Y + EE  +RF VF+ NL    +R     +   G+ +F+DLT  EF+ ++LGL     +R+ +  A+ +   I    DLP   DWR  GAV  VKDQG CGSCW+FS   A+EG + ++TG L SLSEQ+L+DCD         + +SGCNGGLM+ AF+YI+   GGL ++
Sbjct:   39 EHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDI---TDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCD--------TTFNSGCNGGLMDYAFQYIIST-GGLHKE 221          

HSP 2 Score: 23.483 bits (49), Expect = 9.334e-33
Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 1
Query:  637 SLGGVEREKDYPY 675
            S GG+ +E DYPY
Sbjct:  214 STGGLHKEDDYPY 226          
BLAST of EY702259 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.072e-32
Identity = 89/226 (39.38%), Postives = 118/226 (52.21%), Query Frame = 2
Query:  107 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN------DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILQAWGGLSEKKXXXXXXXXXXXCKFDKSKIAAAGSNSVLFP 754
            L+  E H   +K +  K YA + E  +R ++F  N  + AK  QL     V    G+ K++D+   EF+    G N  LR     +   +  T        +P   DWR+HGAVTGVKDQG CGSCW+FS+TGALEG HF   G LVSLSEQ LVDC  +         ++GCNGGLM++AF YI    GG+  +K           C F+K+ I A  +  V  P
Sbjct:   23 LIKEEWH--TYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDN-GGIDTEK-SYPYEGIDDSCHFNKATIGATDTGFVDIP 237          
BLAST of EY702259 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.211e-32
Identity = 77/196 (39.29%), Postives = 110/196 (56.12%), Query Frame = 2
Query:   74 VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILQAWG 646
            + S GE+SE+    A   ++ +K++  K+Y    E + R+  F+ NLR            VH    G+ +F+DLT  E+R  +LGL  + R         +   N+ LP   DWR  GAV  +KDQG CGSCW+FSA  A+EG + + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AF++I+   G
Sbjct:   25 IVSYGERSEEE---ARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCD--------TSYNEGCNGGLMDYAFDFIINNGG 209          

HSP 2 Score: 24.6386 bits (52), Expect = 1.211e-32
Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 1
Query:  643 GGVEREKDYPYTG 681
            GG++ E DYPY G
Sbjct:  208 GGIDTEDDYPYKG 220          
The following BLAST results are available for this feature:
BLAST of EY702259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CYSP_PEA5.406e-9363.81Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
RD19A_ARATH3.753e-8663.81Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
A494_ARATH8.651e-8359.55Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP1_MAIZE1.479e-7456.09Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP1_DICDI2.156e-4142.29Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CYSP_TRYBB2.822e-3343.48Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATL_SCHMA8.211e-3342.47Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
XCP1_ARATH9.334e-3342.05Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CATL_SARPE1.072e-3239.38Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
ORYA_ORYSJ1.211e-3239.29Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-H01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702259 ID=EY702259; Name=EY702259; organism=Citrus sinensis; type=EST; length=847bp
CCTCCTCCTCCTATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACG
ACGATGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAA
GATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATT
CTCCAAGACTTACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGT
TCAAGGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACT
GCTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCG
CCGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTC
AAAAGGCTCCTATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGG
CGTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATC
GTGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTAT
CGACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGAT
CACGAGTGTGATCCAGAAGAATCTGGTTCATGTGACTCTGGGTGCAATGG
TGGGCTAATGAACTCCGCCTTTGAGTACATACTCCAAGCTTGGGGGGGGT
TGAGCGAGAAAAAGACTACCCCTACACCGGGGACCGACGGGGGTCCCTGC
AAATTTGACAAAAGCAAAATTGCTGCAGCTGGATCTAATTCAGTGTTATT
TCCCCTGGAGAAAACAAAGGGGTGCAATTTTGGGGAAACTGGCGCCTCTG
GAGGGGGGATCAAGGCCGTTGGTAGCAAAAATATATTGGAGGGGTTT
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