EY702255

Overview
NameEY702255
Unique NameEY702255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY702255 vs. ExPASy Swiss-Prot
Match: RGLG2_ARATH (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.921e-18
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 3 
Query:  114 QLCSICLTNVKDMAFGCGHQTCCECGQDLELCPFCRSTIQTRIKLY 251
            QLC ICL+N KDMAFGCGHQTCCECG DL++CP CR+ IQTRIKLY
Sbjct:  423 QLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
[Close]
BLAST of EY702255 vs. ExPASy Swiss-Prot
Match: RGLG1_ARATH (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.430e-17
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 3 
Query:  114 QLCSICLTNVKDMAFGCGHQTCCECGQDLELCPFCRSTIQTRIKLY 251
            QLC ICL+N K+MAFGCGHQTCCECG DL++CP CR+ IQTRIKLY
Sbjct:  444 QLCPICLSNPKNMAFGCGHQTCCECGPDLKVCPICRAPIQTRIKLY 489
The following BLAST results are available for this feature:
BLAST of EY702255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
RGLG2_ARATH9.921e-1880.43E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis t... [more]
RGLG1_ARATH6.430e-1778.26E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-G08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702255 ID=EY702255; Name=EY702255; organism=Citrus sinensis; type=EST; length=857bp
CCACGCGTCCGGGACCTTTTTCTCCCTACTAATTTTTTGTTAATGAAGGC
CATATTAATCTCTTTGATTTTCCATTTGACTAAAGATTCAATTACGTCTT
TTGTTGTTTTCAACAGCTTTGCTCCATTTGCCTAACTAATGTGAAAGATA
TGGCCTTTGGTTGCGGACATCAGACATGTTGCGAATGTGGACAAGACCTT
GAATTATGTCCCTTTTGTCGAAGCACAATCCAGACCCGAATTAAGCTCTA
CTAATCTGCATCATCAACAATGACCAAAATTCTTTGTCATTTGTTATGAA
AATGATGTTAGATTTGCTGAATTCAGCTTGAGATGATCTTGGATGCTAGG
AAATGGAAGTGTTTAGGTGCTGTACATTATTGTAAACTTATTGGTCACAT
TATTTTTTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAATTAANAAAATTN
NNNAAGGGGGCGCCCTTCTAAAGGAACCCAAGTTTTCCCCCCCGGGGGGT
GGAAGTTTAAATCTTTTCTTTGTGGCCCCACAAATATTATTTTGGGGGCG
GGTTTTTATAAGCTCGTGGAGGAGAAAACCCCGGGGTCCCCCAATTATAT
CCCTTTTGAAAAATCCCCCCTTTCCAAGGGGGGGAAATAAAAAAAGGGCC
CCCCCCTTCCCCCTCTCCAAAATTTGCCCCCCCAAGAGGAAAAGGAACCC
CCCTTTAAAACGCATTTAACGCCGGGGGGTGTGGGTTTTCCCATTGGGAC
CCCTCTC
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