EY702212

Overview
NameEY702212
Unique NameEY702212
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13417 contig Csv1_Contig13417:489..1191. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702212 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17
Identity = 54/162 (33.33%), Postives = 79/162 (48.77%), Query Frame = 3
Query:   39 SLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAG-TIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGFDTCYSVP-----IVAPTITLMFSGMNVTLPQDNLLIHSTAGSITCLAMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARELC 506
            + YY+ L  + VG   + I P A   N   G G  IIDSGT  T  V  AY +VR  F  ++   +   S  GFD C+  P     +  PT  + F G ++ LP +N  I S +  + CLAM ++       +++  N+QQQN  ++YD  NS +  A   C
Sbjct:  278 TFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQINLPVVNGSSSGFDLCFQTPSDPSNLQIPTFVMHFDGGDLELPSENYFI-SPSNGLICLAMGSSSQG----MSIFGNIQQQNMLVVYDTGNSVVSFASAQC 434          
BLAST of EY702212 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 53/167 (31.74%), Postives = 77/167 (46.11%), Query Frame = 3
Query:   21 INPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGFDTCYSVP-----IVAPTITLMFSGMNVTLPQDNLLIHSTAGSITCLAMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARELC 506
            +NP   + YY+ L  I VG   + IP    Q       G IIDSGT  T L   AY AV   F  ++       S  G  TC+  P     +  P I++ F G  + L + N+LI S A  + CLAM ++       +++  N+QQQ  ++LYD+ N  +      C
Sbjct:  276 LNP---TYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLSTCFQQPSDGSTVQVPEISMQFDGGVLNLGEQNILI-SPAEGVICLAMGSSS---QLGISIFGNIQQQETQVLYDLQNLAVSFVPTQC 435          
The following BLAST results are available for this feature:
BLAST of EY702212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR4.624e-1733.33Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR1.259e-1431.74Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-C11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702212 ID=EY702212; Name=EY702212; organism=Citrus sinensis; type=EST; length=702bp
CCACGCGTCCGCCATTGCTTATAAACCCAAGAAGATCATCACTTTACTAT
GTTAATTTGTTGGCCATTAGGGTTGGCAGAAGAGTTGTTGATATCCCACC
TGGTGCCTTACAGTTCAATCCCACAACCGGCGCTGGCACTATTATTGATT
CTGGCACAGTTTTTACCAGACTGGTGGCGCCAGCTTACACCGCAGTGAGA
GACGTGTTCCGTAGACGTGTAGGGAGTAACTTAACAGTGACATCCCTAGG
CGGATTCGACACGTGCTACTCGGTCCCAATCGTTGCGCCGACAATCACGT
TGATGTTCTCAGGCATGAACGTGACTCTACCACAAGACAACCTTCTAATC
CACAGCACTGCAGGGAGCATCACATGCTTGGCCATGGCTGCAGCTCCAGA
CAACGTCAACTCAGTGCTTAATGTCATTGCCAATATGCAGCAACAAAACC
ACAGAATCCTCTATGATGTGCCCAATTCAAGGCTCGGTGTCGCCCGTGAG
CTTTGCACTTAGATATAGAATTGTGAGATATGTTTGTACTTGTTTTCTCT
TTTTCTTGTGGGTCCTGTAATGGGTAATTTTAGCCGCGTGAGGTTTGTTT
GTCATTATTGCTAATTAACTTTTTATGGGAGGAATTGTGGGGACTCTAAT
GAGACCCAATAAAATTATTTTGTACCTTTTTGTCAAAAAAAAAAAAAAAA
AA
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