EY702198

Overview
NameEY702198
Unique NameEY702198
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9964 contig Csv1_Contig9964:1..872. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702198 vs. ExPASy Swiss-Prot
Match: TOC33_ARATH (Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana GN=TOC33 PE=1 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 2.228e-89
Identity = 161/224 (71.88%), Postives = 194/224 (86.61%), Query Frame = 2
Query:  179 MGSLLLREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGYVNYQALELIKGFLLNKTIDVLLYVDRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKIL 850
            MGSL+ REW GFQQFP+ATQ KLIE   KLKQ+++N++T+LV+GKGGVGKSSTVNS+IGE+VV V+ FQ+E LRPVMVSR+ GGFT+NIIDTPGLVEAGYVN+QALELIKGFL+N+TIDVLLYVDRLD YRVD+LD+Q++ A+T TFGK+IW K+LLVLTHAQ  PPD L+Y+ + SKRSD+LLKTIR G+ + K EFED A+ V   ENSGRCSKN+ DEK L
Sbjct:    1 MGSLV-REWVGFQQFPAATQEKLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTIRAGSKMRKQEFEDSAIAVVYAENSGRCSKNDKDEKAL 223          
BLAST of EY702198 vs. ExPASy Swiss-Prot
Match: TOC34_ARATH (Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana GN=TOC34 PE=1 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 5.137e-86
Identity = 153/219 (69.86%), Postives = 185/219 (84.47%), Query Frame = 2
Query:  194 LREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGYVNYQALELIKGFLLNKTIDVLLYVDRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKIL 850
            LREW G QQFP ATQ+KL+E+L K K+E+V++LT+LVMGKGGVGKSSTVNSVIGE+   V++FQSE LRP +VSR++ GFTLNIIDTPGL+E GYVN QA+ +IK FLLN TIDVLLYVDRLD YRVDDLDRQ++ A+T  FGK+IW+KS LVLTHAQ  PPDGLNY+ + SKRS+ALLK I+ GA L K + + +++PV LVENSGRC KNE+DEKIL
Sbjct:    7 LREWIGIQQFPPATQSKLLEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLIEGGYVNDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSPPDGLNYNHFVSKRSNALLKVIQTGAQLKKQDLQGFSIPVILVENSGRCHKNESDEKIL 225          
BLAST of EY702198 vs. ExPASy Swiss-Prot
Match: TOC34_PEA (Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.109e-80
Identity = 147/219 (67.12%), Postives = 181/219 (82.65%), Query Frame = 2
Query:  194 LREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGYVNYQALELIKGFLLNKTIDVLLYVDRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKIL 850
            +REW+G   F  ATQ KL+ELL  LKQE+VN+LTILVMGKGGVGKSSTVNS+IGERVV+++ FQSE  RPVMVSRS+ GFTLNIIDTPGL+E GY+N  AL +IK FLL+KTIDVLLYVDRLDAYRVD+LD+ + KA+T +FGK IW K+++ LTHAQ  PPDGL YD + SKRS+ALL+ +R GA L K + +   +PV L+ENSGRC+KN++DEK+L
Sbjct:    8 VREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASL-KKDAQASDIPVVLIENSGRCNKNDSDEKVL 225          
BLAST of EY702198 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.422e-27
Identity = 75/230 (32.61%), Postives = 122/230 (53.04%), Query Frame = 2
Query:  185 SLLLREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGY---VNYQALELIKGFLLNKTIDVLLYVDRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDG-----LNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKIL 850
            +LL    AG      A + K +E  ++  +E + +L ILV+GK GVGKS+T+NS++G ++ ++++F         +S +  G  +  IDTPGL  A      N + L  +K  +     D++LYVDRLD    D  +  +++ +T + G  IW+ +++ LTHA   PPDG     L+YDV+ ++ S  + ++I    G  +        PV+LVEN   C KN    K+L
Sbjct:  821 ALLAGRQAGQLFSLDAAKKKAVESEAEGNEELIFSLNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTVNGVKITFIDTPGLKSAAMDQSTNAKMLSSVKKVMKKCPPDIVLYVDRLDTQTRDLNNLPLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQCSHIVQQSIGQAVGDLRLMNPSLMNPVSLVENHPLCRKNREGVKVL 1050          
BLAST of EY702198 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.502e-26
Identity = 83/284 (29.23%), Postives = 141/284 (49.65%), Query Frame = 2
Query:   53 AENTNTVKSDHPGEVR------R*RLYSLSLDATRRRNNIYANSPKKSMG---SLLLREWAGFQQFPSATQNKLIELLSKLKQENVN-TLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAG---YVNYQALELIKGFLLNKTIDVLLYVDRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLN-----YDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKIL 850
            AE++ T ++D   E R      R +   LS    +  +N+        +G    L  R  +    F     + + E L    Q+ ++ + TI+V+GK GVGKS+T+NS+  E  ++ ++FQ    +   +     G  + +IDTPGL+ +    + N + L+ ++ F+     D++LY+DRLD    D  D  +++ +T  FG  IW  +++ LTHA   PPDG N     YD++ ++RS  + + IR  AG  +        PV+LVEN   C  N   +++L
Sbjct:  368 AEDSTTAETDEHDETREKLQFIRVKFLRLSHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSFDRASAMAEQLEAAAQDPLDFSCTIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFVQGIKVRVIDTPGLLPSWSDQHKNEKILKSVRAFIKKSPPDIVLYLDRLDMQSRDSGDMPLLRTITDVFGPSIWFNAIVGLTHAASAPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGDMR-----LMNPVSLVENHSACRTNRAGQRVL 646          
BLAST of EY702198 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.738e-25
Identity = 86/291 (29.55%), Postives = 141/291 (48.45%), Query Frame = 2
Query:   32 SRSKFCWAENTNTVKSDHPGEVR------R*RLYSLSLDATRRRNNIYANSPKKSMG---SLLLREWAGFQQFPSATQNKLIELLSKLKQENVN-TLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGY---VNYQALELIKGFLLNKTIDVLLYVDRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLN-----YDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKIL 850
            S ++F  AE++ T ++D   E R      R +   L+    +  +N+        +G    L  R  +    F     + + E L    Q+ ++ + TI+V+GK GVGKS+T+NS+  E     ++FQ    R   V     G  + +IDTPGL+ +      N + L  +K F+     D++LY+DRLD    D  D  +++ ++  FG  IW  +++ LTHA   PPDG N     YD++ ++RS  + + IR  AG  +        PV+LVEN   C  N   +++L
Sbjct:  479 SHNQFQQAEDSTTTEADEHDETREKLQLIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSFDRASAMAEQLEAAGQDPLDFSCTIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLVQGIKVRVIDTPGLLPSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDSGDMPLLRTISDVFGPSIWFNAIVGLTHAASVPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGDMR-----LMNPVSLVENHSACRTNRAGQRVL 764          
BLAST of EY702198 vs. ExPASy Swiss-Prot
Match: GTPA_DICDI (GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.431e-21
Identity = 74/221 (33.48%), Postives = 115/221 (52.04%), Query Frame = 2
Query:  233 TQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAG--YVNYQALELIKGFLLNKTIDVLLYVDRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVY--------CSKRSDALLKTIR-----LGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKIL 850
            T  +L E+L+ LK    N   +L++G+ GVGKSST+N+V G  +  V+S +S    P   SR   GF LNIIDTPG +++    V+   +  I+ +L  KTI  +L+V++    R D   + +I   T   G Q+WR + +VLT+A    PD   YD +          K  +A     R     + A L + ++    +PV  +ENS RC +NE  +++L
Sbjct:  134 TTEELQEMLAVLKGVQ-NECNVLLLGRTGVGKSSTLNTVFGIDI-PVHSSESCTQDPFTYSRVVNGFKLNIIDTPGFLDSQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQLWRNAAVVLTYANSVLPDSC-YDGFDEEDDVGPWKKHYEARALQFRKFFAGILAQLPQDDYPPKHIPVYAMENSRRCKRNEQGQRVL 351          
BLAST of EY702198 vs. ExPASy Swiss-Prot
Match: TOC90_ARATH (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana GN=TOC90 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.207e-18
Identity = 65/196 (33.16%), Postives = 97/196 (49.49%), Query Frame = 2
Query:  287 TLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGL----VEAGYVNYQALELIKGFLLNKTIDVLLYVDRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPP----DGLNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKIL 850
            +L ILV+GK GVGKS+T+NS+ G+     ++F+    R   V  +  G  +  IDTPG       +   N + L  IK ++  +  DV+LY+DRLD   +   D  +++ +T  FG  IW  ++LV+TH+           +NY+ Y  +R D +   I       K E      PV LVEN   C KN   E +L
Sbjct:  166 SLRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTHSAATTEGRNGQSVNYESYVGQRMDVVQHYIHQAVSDTKLE-----NPVLLVENHPSCKKNLAGEYVL 356          
The following BLAST results are available for this feature:
BLAST of EY702198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
TOC33_ARATH2.228e-8971.88Translocase of chloroplast 33, chloroplastic OS=Ar... [more]
TOC34_ARATH5.137e-8669.86Translocase of chloroplast 34, chloroplastic OS=Ar... [more]
TOC34_PEA1.109e-8067.12Translocase of chloroplast 34 OS=Pisum sativum GN=... [more]
TC159_ARATH1.422e-2732.61Translocase of chloroplast 159, chloroplastic OS=A... [more]
TC120_ARATH3.502e-2629.23Translocase of chloroplast 120, chloroplastic OS=A... [more]
TC132_ARATH1.738e-2529.55Translocase of chloroplast 132, chloroplastic OS=A... [more]
GTPA_DICDI4.431e-2133.48GTP-binding protein A OS=Dictyostelium discoideum ... [more]
TOC90_ARATH1.207e-1833.16Translocase of chloroplast 90, chloroplastic OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702198 ID=EY702198; Name=EY702198; organism=Citrus sinensis; type=EST; length=872bp
CCACGCGTCCGATTAATTGAGGAAGAAATTAAGTCGGTCGAAATTTTGCT
GGGCGGAAAATACAAACACTGTAAAGTCCGACCACCCAGGCGAGGTAAGA
AGATAACGGCTTTACTCACTCAGTTTGGACGCAACTAGAAGAAGAAACAA
CATTTACGCAAACAGCCCGAAGAAATCAATGGGGTCTCTTCTACTTCGTG
AATGGGCGGGGTTTCAACAGTTTCCTTCTGCAACTCAGAACAAATTGATC
GAATTACTGTCCAAATTGAAGCAAGAGAATGTAAACACGTTGACAATTCT
TGTCATGGGCAAAGGTGGTGTTGGAAAATCTTCAACTGTGAATTCTGTTA
TCGGTGAACGAGTAGTCACTGTTAATTCTTTCCAGTCCGAAGCGCTGAGA
CCAGTAATGGTTTCTCGTTCCAAAGGAGGTTTCACATTGAACATCATTGA
TACTCCAGGCCTTGTAGAGGCTGGTTATGTTAATTACCAAGCTCTTGAGT
TGATTAAAGGGTTTCTTTTGAATAAGACCATAGATGTTCTGCTATATGTT
GACCGTTTGGATGCATATAGAGTAGATGACTTGGATAGACAAATTATTAA
GGCTGTCACCGGAACTTTTGGCAAACAAATATGGCGCAAAAGTTTACTTG
TTCTCACTCATGCACAACTCTGCCCTCCTGATGGACTGAACTATGATGTT
TACTGCTCTAAACGATCCGATGCTCTTTTAAAGACTATTCGTCTAGGAGC
TGGACTCGGGAAACATGAATTTGAGGATTATGCTGTTCCAGTCGCTTTGG
TTGAGAACAGCGGCAGATGCAGTAAAAATGAGAATGATGAGAAGATTCTC
CAAATGGTATGCGTGGATTCCA
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