EY702193

Overview
NameEY702193
Unique NameEY702193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11637 contig Csv1_Contig11637:355..1273. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702193 vs. ExPASy Swiss-Prot
Match: UBP13_ARATH (Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana GN=UBP13 PE=1 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.211e-119
Identity = 178/248 (71.77%), Postives = 207/248 (83.47%), Query Frame = 3
Query:   12 DKVRSFRIQKQIPFNLFKEEVAKEFGVPVQFQRFWLWAKRQNHTYRPNRPLTHLEETQTVGQLREVSNKVHNAELKLFLEVERGPDLRPIAPPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTPIEXVGKFRYPEVPSFLDYVHNRQVVHFRSLEKPQEDDFCLEXVKLYTYDDXVERVLSNWG 755
            +KVRSFRIQKQ PF  FKEEVAKEFGVPVQ QRFW+WAKRQNHTYRPNRPL+  EE QTVGQ+RE SNK +NAELKLFLE+ERGPD  PI PPEKT EDILLFFKLYDPE   LRYVGRL VKS+ KPM+ + +LN+MAG+APDEEI+L+EEIKFEP VMCE I+K+ +FR  Q+EDGDIIC+QK   IE   +FRYP+VPSFL+YV NR++V FR+LEKP+ED+F +E  KL+TYDD VERV    G
Sbjct:  592 EKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASNKANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKPMDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQKPLSIEE-SEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKLG 838          

HSP 2 Score: 62.3882 bits (150), Expect = 1.211e-119
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 1
Query:  814 PPXHXYRGVDHLSDMLIHYNQTSDVLYYEVLDIHL 918
            P    YRGVDHLSDML+HYNQTSD+LYYEVLDI L
Sbjct:  859 PQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPL 893          

HSP 3 Score: 42.743 bits (99), Expect = 1.211e-119
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query:  743 QQLGWXDPSKIRLTSHNWYSQQPNP 817
            ++LG  DPSK+RLTSHN YSQQP P
Sbjct:  835 EKLGLDDPSKLRLTSHNCYSQQPKP 859          
BLAST of EY702193 vs. ExPASy Swiss-Prot
Match: UBP12_ARATH (Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 PE=2 SV=2)

HSP 1 Score: 348.591 bits (893), Expect = 6.942e-114
Identity = 174/248 (70.16%), Postives = 198/248 (79.84%), Query Frame = 3
Query:   12 DKVRSFRIQKQIPFNLFKEEVAKEFGVPVQFQRFWLWAKRQNHTYRPNRPLTHLEETQTVGQLREVSNKVHNAELKLFLEVERGPDLRPIAPPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTPIEXVGKFRYPEVPSFLDYVHNRQVVHFRSLEKPQEDDFCLEXVKLYTYDDXVERVLSNWG 755
            DKVRSFRIQKQ PF  FKEEVAKEFGVPVQ QRFW+WAKRQNHTYRPNRPLT  EE Q VGQ+RE SNK + AELKLFLEVE   DLRPI PPEK+KEDILLFFKLYDPEK  L Y GRL VKS+ KPM+   KLNEM G+APDEEI+L+EEIKFEP VMCE ++K+ +FR  Q+EDGDIICFQK    + + +  YP VPSFL+YV NRQ+V FR+LEKP+ED+F LE  K +TYDD VE+V    G
Sbjct:  594 DKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASNKANTAELKLFLEVEH-LDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSKPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQKPLVNKEI-ECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEKLG 839          

HSP 2 Score: 62.3882 bits (150), Expect = 6.942e-114
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 1
Query:  814 PPXHXYRGVDHLSDMLIHYNQTSDVLYYEVLDIHL 918
            P    YRGVDHLSDML+HYNQTSD+LYYEVLDI L
Sbjct:  860 PQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPL 894          

HSP 3 Score: 43.8986 bits (102), Expect = 6.942e-114
Identity = 19/28 (67.86%), Postives = 22/28 (78.57%), Query Frame = 2
Query:  734 KSTQQLGWXDPSKIRLTSHNWYSQQPNP 817
            K  ++LG  DPSK+RLTSHN YSQQP P
Sbjct:  833 KVAEKLGLDDPSKLRLTSHNCYSQQPKP 860          
BLAST of EY702193 vs. ExPASy Swiss-Prot
Match: UBP5_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 5 OS=Schizosaccharomyces pombe GN=ubp5 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 3.228e-17
Identity = 74/266 (27.82%), Postives = 123/266 (46.24%), Query Frame = 3
Query:    6 RPDKVRSFRIQKQIPFNLFKEEVAKEFGVPVQFQRFWLWAKRQNHTYRPNRPLTHLEETQTVGQLREVSNKVHNAE---LKLFLEVERGPDLRPIAPPEKTKE-DILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTPI---EXVGKFRYPEVPSFLDYVHNRQVVHFRS--LEKPQEDDFCLEXVKLYTYDDXVERVLSNWG-GMIHLR 773
            + + +  FRI+K+  F+ F   VA++ G P +  RFW   KR N T R   P+  L  T     + EV N V N++   L+L+LE+    +L      + T E +  +F K +D + +E+   G L V  + +     P L E A    +  +++YEEIK     M + +    TF  S+L  GDIICF+   P    + +    +       D++ N+ +V FR   +++    +F +   +   YDD    +    G G  H+R
Sbjct:  598 KEETIPQFRIKKEAKFSEFIPIVAEKLGYPQECMRFWYVVKRHNCTVRVESPVNELNST-----MEEVKN-VWNSQGEILRLYLEITPENELSSSLTHQNTGEWNAFIFVKYFDRKSQEISGCGTLHVNKSDEIRSICPLLCERANLPKNTPLNIYEEIK---PGMVDFLRLEKTFTQSELSTGDIICFEPCRPSALEDDIVNSGFDSALKLYDFLSNKVLVLFRPRFIDQDSIIEFEMLLDRRIKYDDLCIELGQKLGIGADHIR 854          
BLAST of EY702193 vs. ExPASy Swiss-Prot
Match: UBP7_DROME (Ubiquitin carboxyl-terminal hydrolase 7 OS=Drosophila melanogaster GN=Usp7 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13
Identity = 70/246 (28.46%), Postives = 104/246 (42.28%), Query Frame = 3
Query:   21 RSFRIQKQIPFNLFKEEVAKEFGVPVQFQRFWLWAKRQNHTYRPNRPLTHL----EETQTVGQLREVSNKVHNAELKLFLEVERGPDLRPIAPPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSV-MCEPIEKRCTFRASQLEDGDIICFQKSTPIEXVGKFRYPEVPS-FLDYVHNRQVVHFRSLEKPQEDDFCLEXVKLYTYDDXVERV 740
            R FRI++    +   +   + FGV  Q  R W     Q   +      +H     E ++T+ Q+   S K     L+L      GP      PP   K + LLF K YDP  + L Y+G      T + ++ +P +N   G+ PD E+ +Y+E   +  V + EPIE         L+ G I+ F++        K   P V   FLD V+  +++ F     P E DF LE    Y YD     V
Sbjct:  619 RVFRIKQNQTVDELVDLFVRGFGVSRQRMRMWNLCTAQTQKF------SHFDFVAEGSRTIEQI-STSQKPWVIWLQLAWTDVPGP-----LPPFNPKTESLLFLKYYDPRNKRLNYIGCTQQPHTRRLIDLVPDVNSKLGFEPDTELTIYDEYADKKLVNLNEPIESALFIPQDHLQ-GHILIFERE---NVDAKLDLPTVGDYFLDLVYRIEII-FSDKCNPNEPDFTLELSNRYNYDQLANAV 847          
BLAST of EY702193 vs. ExPASy Swiss-Prot
Match: UBP7_RAT (Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus GN=Usp7 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.693e-13
Identity = 55/193 (28.50%), Postives = 87/193 (45.08%), Query Frame = 3
Query:   12 DKVRS--FRIQKQIPFNLFKEEVAKEFGVPVQFQRFWLWAKRQNHTYRPNRPLTHLEETQTVGQLREVSNKVHNAELKLFLEVERGPDLRPIA---PPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTP 575
            +KVR   F++ K      F + +++  G P    R W    R N T RP       + ++T+ +L +  N        +FLE    P+L       P      D++LF K+YDP+   L Y G ++   + K  + LP + + AG+  D  + LYEE+K   +   +  +        +L DGDII FQK  P
Sbjct:  588 EKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRPAMLDNEADGSKTMIELSDNENP-----WTIFLETV-DPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQKDDP 774          
BLAST of EY702193 vs. ExPASy Swiss-Prot
Match: UBP7_MOUSE (Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 55/193 (28.50%), Postives = 86/193 (44.56%), Query Frame = 3
Query:   12 DKVRS--FRIQKQIPFNLFKEEVAKEFGVPVQFQRFWLWAKRQNHTYRPNRPLTHLEETQTVGQLREVSNKVHNAELKLFLEVERGPDLRPIA---PPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTP 575
            +KVR   F++ K      F + +++  G P    R W    R N T RP       +  +T+ +L +  N        +FLE    P+L       P      D++LF K+YDP+   L Y G ++   + K  + LP + + AG+  D  + LYEE+K   +   +  +        +L DGDII FQK  P
Sbjct:  588 EKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRPAMLDNEADGNKTMIELSDNENP-----WTIFLETV-DPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQKDDP 774          
BLAST of EY702193 vs. ExPASy Swiss-Prot
Match: UBP7_HUMAN (Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 53/190 (27.89%), Postives = 83/190 (43.68%), Query Frame = 3
Query:   15 KVRSFRIQKQIPFNLFKEEVAKEFGVPVQFQRFWLWAKRQNHTYRPNRPLTHLEETQTVGQLREVSNKVHNAELKLFLEVERGPDLRPIA---PPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTP 575
            K   F++ K      F + +++  G P    R W    R N T RP       +  +T+ +L +  N        +FLE    P+L       P      D++LF K+YDP+   L Y G ++   + K  + LP + + AG+  D  + LYEE+K   +   +  +        +L DGDII FQK  P
Sbjct:  590 KYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRPAMLDNEADGNKTMIELSDNENP-----WTIFLETV-DPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQKDDP 773          
BLAST of EY702193 vs. ExPASy Swiss-Prot
Match: UBP7_CHICK (Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13
Identity = 52/190 (27.37%), Postives = 83/190 (43.68%), Query Frame = 3
Query:   15 KVRSFRIQKQIPFNLFKEEVAKEFGVPVQFQRFWLWAKRQNHTYRPNRPLTHLEETQTVGQLREVSNKVHNAELKLFLEVERGPDLRPIA---PPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTP 575
            K   F++ K      F + +++  G P    R W    R N T RP       +  +T+ +L +  N        +FLE    P++       P      D++LF K+YDP+   L Y G ++   + K  + LP + E AG+  +  + LYEE+K   +   +  +        +L DGDII FQK  P
Sbjct:  590 KYTVFKVLKNSTLTEFVQNLSQTMGFPQDQIRLWPMQARSNGTKRPAMLDNEADGNKTMIELSDNENP-----WTIFLETV-DPEMAATGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPVMCERAGFPQETNLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQKDDP 773          
The following BLAST results are available for this feature:
BLAST of EY702193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
UBP13_ARATH1.211e-11971.77Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabid... [more]
UBP12_ARATH6.942e-11470.16Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabid... [more]
UBP5_SCHPO3.228e-1727.82Probable ubiquitin carboxyl-terminal hydrolase 5 O... [more]
UBP7_DROME2.828e-1328.46Ubiquitin carboxyl-terminal hydrolase 7 OS=Drosoph... [more]
UBP7_RAT3.693e-1328.50Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus ... [more]
UBP7_MOUSE4.824e-1328.50Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus mus... [more]
UBP7_HUMAN4.824e-1327.89Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sa... [more]
UBP7_CHICK4.824e-1327.37Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-B03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702193 ID=EY702193; Name=EY702193; organism=Citrus sinensis; type=EST; length=919bp
CCACGCGTCCGGACAAAGTTAGGAGTTTTCGTATTCAGAAGCAGATACCT
TTCAACCTTTTCAAGGAAGAGGTTGCCAAAGAGTTTGGTGTTCCGGTGCA
ATTTCAGCGCTTTTGGCTGTGGGCAAAGCGTCAAAACCATACATACCGTC
CTAATAGGCCATTGACACATCTAGAAGAAACACAAACTGTTGGACAGTTG
AGGGAGGTGTCAAATAAGGTCCATAATGCAGAACTGAAGTTATTCTTAGA
AGTAGAACGTGGACCGGATTTACGCCCTATTGCTCCACCTGAGAAGACAA
AGGAAGATATTTTGCTCTTCTTCAAGCTTTATGACCCTGAGAAAGAAGAG
CTGCGTTATGTTGGAAGGCTTTTTGTGAAAAGTACTGGTAAGCCGATGGA
ATATTTGCCAAAACTAAATGAAATGGCTGGTTATGCTCCTGATGAAGAAA
TCGATCTATATGAGGAAATTAAGTTTGAGCCCAGTGTAATGTGTGAGCCC
ATAGAAAAGAGATGCACGTTTCGAGCTAGCCAGCTTGAAGATGGAGACAT
TATTTGCTTTCAAAAATCTACTCCAATTGAANGTGTTGGTAAATTTCGCT
ATCCGGAAGTGCCTTCATTCTTGGACTATGTGCACAATCGCCAAGTGGTT
CATTTTCGGTCTCTTGAAAAACCCCAAGAAGATGATTTCTGTCTAGAGNA
TGTCAAGCTTTATACTTATGATGACNGTGTAGAAAGAGTACTCAGCAACT
GGGGTGGNATGATCCATCTAAGATCAGGCTCACATCACACAACTGGTACT
CTCAGCAACCTAACCCCCANNCCATNAGTACCGGGGGGTTGATCATTTAT
CTGACATGCTGATCCACTACAACCAGACTTCTGATGTATTATATTATGAA
GTATTGGACATTCACCTTC
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