EY702186

Overview
NameEY702186
Unique NameEY702186
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5428 contig Csv1_Contig5428:175..1056. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702186 vs. ExPASy Swiss-Prot
Match: HNRPF_RAT (Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus GN=Hnrnpf PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26
Identity = 73/195 (37.44%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  139 VVRLRGLPFNCTDIDICKFFAGLDIVDVL-----LVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VV+LRGLP++C+  D+  F +   I D +     +  + GR SGEAFV       V+ AL++DR++MG RY+EVF+  R +    +   + + G           P+ A   ND         +++RGLPF   K EIVQFF   +I+ + I +   P+GK TGEA+V+F S E A++A+ K K  IG RY+E+F
Sbjct:   12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTE----MDWVLKHSG-----------PNSADSANDG-------FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184          

HSP 2 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 1
Query:  142 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQD 366
            VRLRGLPF CT  +I +FF+GL+IV     L V+  G+ +GEAFV FA     E AL + ++ +G RY+EVF+  +++
Sbjct:  113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 190          
BLAST of EY702186 vs. ExPASy Swiss-Prot
Match: HNRPF_MOUSE (Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus GN=Hnrnpf PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26
Identity = 73/195 (37.44%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  139 VVRLRGLPFNCTDIDICKFFAGLDIVDVL-----LVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VV+LRGLP++C+  D+  F +   I D +     +  + GR SGEAFV       V+ AL++DR++MG RY+EVF+  R +    +   + + G           P+ A   ND         +++RGLPF   K EIVQFF   +I+ + I +   P+GK TGEA+V+F S E A++A+ K K  IG RY+E+F
Sbjct:   12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTE----MDWVLKHSG-----------PNSADSANDG-------FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184          

HSP 2 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 1
Query:  142 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQD 366
            VRLRGLPF CT  +I +FF+GL+IV     L V+  G+ +GEAFV FA     E AL + ++ +G RY+EVF+  +++
Sbjct:  113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 190          
BLAST of EY702186 vs. ExPASy Swiss-Prot
Match: HNRPF_MACFA (Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis GN=HNRNPF PE=2 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26
Identity = 73/195 (37.44%), Postives = 108/195 (55.38%), Query Frame = 1
Query:  139 VVRLRGLPFNCTDIDICKFFAGLDIVDV-----LLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VV+LRGLP++C+  D+  F +   I D       +  + GR SGEAFV       V+ AL++DR++MG RY+EVF+  R +    +   + + G           P+ A   ND         +++RGLPF   K EIVQFF   +I+ + I +   P+GK TGEA+V+F S E A++A+ K K  IG RY+E+F
Sbjct:   12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTE----MDWVLKHSG-----------PNSADSANDG-------FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184          

HSP 2 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 1
Query:  142 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQD 366
            VRLRGLPF CT  +I +FF+GL+IV     L V+  G+ +GEAFV FA     E AL + ++ +G RY+EVF+  +++
Sbjct:  113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 190          
BLAST of EY702186 vs. ExPASy Swiss-Prot
Match: HNRPF_HUMAN (Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26
Identity = 73/195 (37.44%), Postives = 108/195 (55.38%), Query Frame = 1
Query:  139 VVRLRGLPFNCTDIDICKFFAGLDIVDV-----LLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VV+LRGLP++C+  D+  F +   I D       +  + GR SGEAFV       V+ AL++DR++MG RY+EVF+  R +    +   + + G           P+ A   ND         +++RGLPF   K EIVQFF   +I+ + I +   P+GK TGEA+V+F S E A++A+ K K  IG RY+E+F
Sbjct:   12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTE----MDWVLKHSG-----------PNSADSANDG-------FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184          

HSP 2 Score: 107.842 bits (268), Expect = 8.260e-23
Identity = 78/250 (31.20%), Postives = 111/250 (44.40%), Query Frame = 1
Query:  142 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDY---------------------------YNAVASEVNYE----GIYDNDFHGSPPPSRAK------------------------RYNDKD---QMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VRLRGLPF CT  +I +FF+GL+IV     L V+  G+ +GEAFV FA     E AL + ++ +G RY+EVF+  +++                            Y  +  +   E    G Y   + G    S                           RY D +   Q      + MRGLP+   +++I  FF     +  ++HI   PDG+ TGEA VEF + EEA  AM KD+  +  RY+ELF
Sbjct:  113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRPGAYSTGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPV--RVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 360          
BLAST of EY702186 vs. ExPASy Swiss-Prot
Match: HNRPF_BOVIN (Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus GN=HNRNPF PE=2 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 6.111e-26
Identity = 72/195 (36.92%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  139 VVRLRGLPFNCTDIDICKFFAGLDIVDVL-----LVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VV+LRGLP++C+  D+  F +   I D +     +  + GR SGEAFV       V+ AL++DR++MG RY+EVF+  R +    +   + + G           P+ A   ND         +++RGLPF   K EI+QFF   +I+ + I +   P+GK TGEA+V+F S E A++A+ K K  IG RY+E+F
Sbjct:   12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTE----MDWVLKHSG-----------PNSADTANDG-------FVRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVF 184          

HSP 2 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 1
Query:  142 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQD 366
            VRLRGLPF CT  +I +FF+GL+IV     L V+  G+ +GEAFV FA     E AL + ++ +G RY+EVF+  +++
Sbjct:  113 VRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 190          
BLAST of EY702186 vs. ExPASy Swiss-Prot
Match: HNRH1_MOUSE (Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus GN=Hnrnph1 PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 69/195 (35.38%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  139 VVRLRGLPFNCTDIDICKFFAGLDIVDV-----LLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VV++RGLP++C+  ++ +FF+   I +       +  + GR SGEAFV      +V+ AL++DR+ MG RYVEVF+          ++ V  + +  +    SP  +     ND         +++RGLPF   K EIVQFF   +I+ + I +     G++TGEA+V+F S E A++A+ K K  IG RY+E+F
Sbjct:   12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFK----------SNNVEMDWVLKHTGPNSPDTA-----NDG-------FVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184          

HSP 2 Score: 108.612 bits (270), Expect = 4.842e-23
Identity = 82/250 (32.80%), Postives = 115/250 (46.00%), Query Frame = 1
Query:  142 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDY---------------------------YNAVASEVNYE-----------GIYD-----NDFHGSPPPSRAK------------RYNDKD---QMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VRLRGLPF C+  +I +FF+GL+IV     L V+  GR +GEAFV FA     E AL++ ++ +G RY+E+F+  R +                            YN++     +E           G YD     ND +G       +            RY D     Q      + MRGLP+   +++I  FF     +  ++HI   PDG+ TGEA VEF + E+A  AM KDK  +  RYVELF
Sbjct:  113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPV--RVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELF 360          
BLAST of EY702186 vs. ExPASy Swiss-Prot
Match: HNRH1_HUMAN (Heterogeneous nuclear ribonucleoprotein H OS=Homo sapiens GN=HNRNPH1 PE=1 SV=4)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 69/195 (35.38%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  139 VVRLRGLPFNCTDIDICKFFAGLDIVDV-----LLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VV++RGLP++C+  ++ +FF+   I +       +  + GR SGEAFV      +V+ AL++DR+ MG RYVEVF+          ++ V  + +  +    SP  +     ND         +++RGLPF   K EIVQFF   +I+ + I +     G++TGEA+V+F S E A++A+ K K  IG RY+E+F
Sbjct:   12 VVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFK----------SNNVEMDWVLKHTGPNSPDTA-----NDG-------FVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184          

HSP 2 Score: 108.612 bits (270), Expect = 4.842e-23
Identity = 82/250 (32.80%), Postives = 115/250 (46.00%), Query Frame = 1
Query:  142 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDY---------------------------YNAVASEVNYE-----------GIYD-----NDFHGSPPPSRAK------------RYNDKD---QMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VRLRGLPF C+  +I +FF+GL+IV     L V+  GR +GEAFV FA     E AL++ ++ +G RY+E+F+  R +                            YN++     +E           G YD     ND +G       +            RY D     Q      + MRGLP+   +++I  FF     +  ++HI   PDG+ TGEA VEF + E+A  AM KDK  +  RYVELF
Sbjct:  113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYNGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSTFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPV--RVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVELF 360          
BLAST of EY702186 vs. ExPASy Swiss-Prot
Match: RBM12_MOUSE (RNA-binding protein 12 OS=Mus musculus GN=Rbm12 PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 5.720e-24
Identity = 67/202 (33.17%), Postives = 105/202 (51.98%), Query Frame = 1
Query:  142 VRLRGLPFNCTDIDICKFFAGLDIVDV-LLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPP---------SRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPFT 717
            V + G+PF+  + D+ +FF GL +  V LL +  GR +G   V F  P     AL+R+R  M +RYVEV     + +  A    + ++          PPP         S  KR   +   E    + ++GLPF  +   ++ FFK   I+ED I+IA  P+GKATGE +VEF +  + K A+C+ K  +G+R++++ P T
Sbjct:  306 VSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEALKRNRMLMIQRYVEVSPATERQWV-AAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKRSRSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPIT 506          

HSP 2 Score: 68.9366 bits (167), Expect = 4.252e-11
Identity = 44/177 (24.86%), Postives = 84/177 (47.46%), Query Frame = 1
Query:  142 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILK-MRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRA 660
            V L+GLPF   +  +  FF  LDIV+    +    NG+ +GE FV F      + AL R +Q MG R+++V    ++     +         +  D        R    N + ++   ++   +  +PFS+ K +++QF +   + E  +H+    +G+  G+A V+F + ++A ++
Sbjct:  432 VYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYD-------QRELVLNPEGEVSSAKVCAHITNIPFSITKMDVLQFLEGIPVDESAVHVLVDNNGQGLGQALVQFKTEDDAHKS 601          
BLAST of EY702186 vs. ExPASy Swiss-Prot
Match: HNRH2_RAT (Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus GN=Hnrnph2 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.720e-24
Identity = 68/195 (34.87%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  139 VVRLRGLPFNCTDIDICKFFAGLDIVDV-----LLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VV++RGLP++C+  ++ +FF+   I +       +  + GR SGEAFV      +V+ AL++DR+ MG RYVEVF+          ++ V  + +  +    SP  +     ND         +++RGLPF   K EIVQFF   +I+ + + +     G++TGEA+V+F S E A++A+ K K  IG RY+E+F
Sbjct:   12 VVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFK----------SNSVEMDWVLKHTGPNSPDTA-----NDG-------FVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184          

HSP 2 Score: 108.227 bits (269), Expect = 6.324e-23
Identity = 82/250 (32.80%), Postives = 115/250 (46.00%), Query Frame = 1
Query:  142 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDY---------------------------YNAVASEVNYE-----------GIYD-----NDFHGSPPPSRAK------------RYND---KDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VRLRGLPF C+  +I +FF+GL+IV     L V+  GR +GEAFV FA     E AL++ ++ +G RY+E+F+  R +                            YN++     +E           G YD     ND +G       +            RY D     Q      + MRGLP+   +++I  FF     +  ++HI   PDG+ TGEA VEF + E+A  AM KDK  +  RYVELF
Sbjct:  113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMTMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYGGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSSFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPM--RVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELF 360          
BLAST of EY702186 vs. ExPASy Swiss-Prot
Match: HNRH2_PONAB (Heterogeneous nuclear ribonucleoprotein H2 OS=Pongo abelii GN=HNRNPH2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.720e-24
Identity = 68/195 (34.87%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  139 VVRLRGLPFNCTDIDICKFFAGLDIVDV-----LLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPPPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VV++RGLP++C+  ++ +FF+   I +       +  + GR SGEAFV      +V+ AL++DR+ MG RYVEVF+          ++ V  + +  +    SP  +     ND         +++RGLPF   K EIVQFF   +I+ + + +     G++TGEA+V+F S E A++A+ K K  IG RY+E+F
Sbjct:   12 VVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESEEEVKLALKKDRETMGHRYVEVFK----------SNSVEMDWVLKHTGPNSPDTA-----NDG-------FVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIF 184          

HSP 2 Score: 108.227 bits (269), Expect = 6.324e-23
Identity = 82/250 (32.80%), Postives = 115/250 (46.00%), Query Frame = 1
Query:  142 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDY---------------------------YNAVASEVNYE-----------GIYD-----NDFHGSPPPSRAK------------RYND---KDQMEHTEILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELF 708
            VRLRGLPF C+  +I +FF+GL+IV     L V+  GR +GEAFV FA     E AL++ ++ +G RY+E+F+  R +                            YN++     +E           G YD     ND +G       +            RY D     Q      + MRGLP+   +++I  FF     +  ++HI   PDG+ TGEA VEF + E+A  AM KDK  +  RYVELF
Sbjct:  113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDYGGYNDGYGFGSDRFGRDLNYCFSGMSDHRYGDGGSSFQSTTGHCVHMRGLPYRATENDIYNFFSPLNPM--RVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELF 360          
The following BLAST results are available for this feature:
BLAST of EY702186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
HNRPF_RAT4.679e-2637.44Heterogeneous nuclear ribonucleoprotein F OS=Rattu... [more]
HNRPF_MOUSE4.679e-2637.44Heterogeneous nuclear ribonucleoprotein F OS=Mus m... [more]
HNRPF_MACFA4.679e-2637.44Heterogeneous nuclear ribonucleoprotein F OS=Macac... [more]
HNRPF_HUMAN4.679e-2637.44Heterogeneous nuclear ribonucleoprotein F OS=Homo ... [more]
HNRPF_BOVIN6.111e-2636.92Heterogeneous nuclear ribonucleoprotein F OS=Bos t... [more]
HNRH1_MOUSE4.380e-2435.38Heterogeneous nuclear ribonucleoprotein H OS=Mus m... [more]
HNRH1_HUMAN4.380e-2435.38Heterogeneous nuclear ribonucleoprotein H OS=Homo ... [more]
RBM12_MOUSE5.720e-2433.17RNA-binding protein 12 OS=Mus musculus GN=Rbm12 PE... [more]
HNRH2_RAT5.720e-2434.87Heterogeneous nuclear ribonucleoprotein H2 OS=Ratt... [more]
HNRH2_PONAB5.720e-2434.87Heterogeneous nuclear ribonucleoprotein H2 OS=Pong... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-A07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702186 ID=EY702186; Name=EY702186; organism=Citrus sinensis; type=EST; length=882bp
CCACGCGTCCGGTACGAGGTCGGCTCAAAGAGACAAAGAATGATGGAACC
AAATCCTTACTTCGCAGTGAGCAGCAGTGCAAGTGGCTTTCAACCTTACG
GCTATGGTGGTGGGTTTCCGCCCCCGCCTTCCTTTCCTGTTGTTCGCCTC
AGGGGGCTGCCATTTAACTGCACTGATATTGACATTTGCAAGTTCTTTGC
TGGACTGGATATTGTGGATGTGTTGCTGGTCAACAAGAATGGACGCTTCT
CAGGAGAGGCTTTTGTTGTCTTTGCTGGGCCCATACAAGTTGAGTTTGCT
TTACAGAGAGATCGGCAGAACATGGGGCGTCGGTATGTTGAAGTTTTCAG
GTGCAAGAGACAGGATTACTACAATGCCGTGGCTTCAGAGGTGAATTATG
AAGGGATCTATGATAATGATTTCCATGGAAGTCCTCCACCATCACGAGCT
AAAAGGTACAATGACAAAGATCAAATGGAACACACTGAAATTTTGAAGAT
GCGTGGCCTTCCTTTCTCTGTGAAGAAATCTGAAATAGTTCAATTCTTTA
AAGACTACAAGATCATTGAAGATAAGATACACATTGCATGCCGACCTGAT
GGTAAGGCTACCGGTGAGGCATATGTGGAGTTTGTTTCTGTAGAGGAAGC
TAAGAGAGCAATGTGTAAAGACAAGATGACAATTGGCTCGAGGTATGTCG
AGCTGTTCCCCTTCACACCTGATGAAGCTCGGCGTGCTGAGTCAAGATCA
AGACAGTGAAGAAGCGTTAATTGTTGGTTAGAGGGTTTTAATGGCTGAAA
TATATTTCTTTTCATCTTTGTAACTTTTACCAGCTGTGCTAGTATGCATG
CACCCTCTGATTTCACGTGAGCTTTCATTCTG
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