EY702183

Overview
NameEY702183
Unique NameEY702183
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig889 contig Csv1_Contig889:1136..1703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702183 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.361e-73
Identity = 131/157 (83.44%), Postives = 138/157 (87.90%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALRXXXAXXKSEHAFYLDWAVHSFRNHNCXXSDTTXDHTHMCYSNSTTLSHSI 472
            LSGFAFTANGWVQSYGSRCVKPP+IYGDVSRPKAMTVFWS++AQSMT+RPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEK GI VIQIDEAALR      KSEHAFYLDWAVHSFR  NC   D+T  HTHMCYS+   + HSI
Sbjct:  504 LSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFNDIIHSI 660          
BLAST of EY702183 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 7.470e-72
Identity = 132/157 (84.08%), Postives = 134/157 (85.35%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALRXXXAXXKSEHAFYLDWAVHSFRNHNCXXSDTTXDHTHMCYSNSTTLSHSI 472
            LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPK MTVFWS+ AQSMT RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDLEKAGI VIQIDEAALR      KSEHAFYLDWAVHSFR  N    DTT  HTHMCYSN   + HSI
Sbjct:  503 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTAAQSMTQRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSI 659          
BLAST of EY702183 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 9.756e-72
Identity = 131/157 (83.44%), Postives = 135/157 (85.99%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALRXXXAXXKSEHAFYLDWAVHSFRNHNCXXSDTTXDHTHMCYSNSTTLSHSI 472
            LSGFAF+ANGWVQSYGSRCVKPPIIYGDVSRP  MTVFWSS+AQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIK+EVEDLEKAGINVIQIDEAALR      KSEH FYL WAVHSFR  N    DTT  HTHMCYSN   + HSI
Sbjct:  504 LSGFAFSANGWVQSYGSRCVKPPIIYGDVSRPNPMTVFWSSMAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKNEVEDLEKAGINVIQIDEAALREGLPLRKSEHDFYLKWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSI 660          
BLAST of EY702183 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 1.664e-71
Identity = 131/157 (83.44%), Postives = 133/157 (84.71%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALRXXXAXXKSEHAFYLDWAVHSFRNHNCXXSDTTXDHTHMCYSNSTTLSHSI 472
            LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRP  MTVFWS  AQSMT RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDLEKAGINVIQIDEAALR      K+EHAFYLDWAVHSFR  N    DTT  HTHMCYSN   + HSI
Sbjct:  504 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMTVFWSQTAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNLPLQDTTQIHTHMCYSNFNDIIHSI 660          
BLAST of EY702183 vs. ExPASy Swiss-Prot
Match: METE_FLAJ1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=metE PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.414e-54
Identity = 103/158 (65.19%), Postives = 117/158 (74.05%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALRXXXAXXKSEHAFYLDWAVHSFRNHNCXXSDTTXDHTHMCYSNSTTLSHSIS 475
            L GF FT NGWVQSYGSRCVKPP+IYGDVSRP  MTV WS  AQS+T++ +KGMLTGPVTIL WSFVRNDQPR ETC QIALA++DEV DLEKAGI +IQIDE A+R      K E A YLDWAV +FR      +D T  H HMCYS    +  +I+
Sbjct:  512 LDGFTFTKNGWVQSYGSRCVKPPVIYGDVSRPNPMTVKWSKYAQSLTSKWVKGMLTGPVTILQWSFVRNDQPRSETCTQIALAVRDEVVDLEKAGIKIIQIDEPAIREGLPLRKEEWAKYLDWAVKAFRISASGVNDDTQIHPHMCYSEFNDIIQNIA 669          
BLAST of EY702183 vs. ExPASy Swiss-Prot
Match: METE_BORA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella avium (strain 197N) GN=metE PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.378e-54
Identity = 101/158 (63.92%), Postives = 119/158 (75.32%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALRXXXAXXKSEHAFYLDWAVHSFRNHNCXXSDTTXDHTHMCYSNSTTLSHSIS 475
            L+GFAFT NGWVQSYGSRCVKPPII+GDV+RP  MTV WSS AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLEKAG+ VIQIDE A+R      +++   YLDWAV  FR      +D T  HTHMCYS    +  SI+
Sbjct:  509 LAGFAFTKNGWVQSYGSRCVKPPIIFGDVARPAPMTVGWSSYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVLDLEKAGVKVIQIDEPAIREGLPLRRADWQAYLDWAVDCFRLSTAGVADDTQIHTHMCYSEFNDIIESIA 666          
BLAST of EY702183 vs. ExPASy Swiss-Prot
Match: METE_MARAV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metE PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.024e-54
Identity = 98/158 (62.03%), Postives = 124/158 (78.48%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALRXXXAXXKSEHAFYLDWAVHSFRNHNCXXSDTTXDHTHMCYSNSTTLSHSIS 475
            L G+AFT  GWVQSYGSRCVKPPI++GD+ RP+AMTV W   AQS+T +P+KGMLTGPVTILNWSFVR+DQPR ++C Q+ALAI++EV+DLEKAG+N+IQIDEAALR      +S+ A YL+WA++SFR       D+T  HTHMCYS    +  +I+
Sbjct:  502 LDGYAFTRFGWVQSYGSRCVKPPILFGDIRRPQAMTVEWIRYAQSLTDKPVKGMLTGPVTILNWSFVRDDQPRKDSCLQLALAIREEVQDLEKAGVNIIQIDEAALREGLPLRQSDWATYLEWAINSFRIAANGVDDSTQIHTHMCYSEFNDIIEAIA 659          
BLAST of EY702183 vs. ExPASy Swiss-Prot
Match: METE_ALHEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 9.174e-54
Identity = 104/159 (65.41%), Postives = 115/159 (72.33%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALRXXXAXXKSEHAFYLDWAVHSFRNHNCXXSDTTXDHTHMCYSNSTTLSHSIST 478
            L GFAFT  GWVQSYGSRCVKPPIIYGDVSRP+ MTV WS  AQS+T RPMKGMLTGPVT+L WSFVR+DQPR ETC QIALA++DEV DLE AGI  IQIDE ALR      + +   YLDWAV  FR       D T  HTHMCYS    +  +I+T
Sbjct:  504 LDGFAFTRAGWVQSYGSRCVKPPIIYGDVSRPRPMTVRWSEYAQSLTGRPMKGMLTGPVTVLQWSFVRDDQPRSETCRQIALALRDEVADLEAAGIPAIQIDEPALREGLPLQQRQWPGYLDWAVDCFRLTASVAQDATQIHTHMCYSEFNDIMGAIAT 662          
BLAST of EY702183 vs. ExPASy Swiss-Prot
Match: METE_BURCM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metE PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.669e-53
Identity = 101/158 (63.92%), Postives = 120/158 (75.95%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALRXXXAXXKSEHAFYLDWAVHSFRNHNCXXSDTTXDHTHMCYSNSTTLSHSIS 475
            L G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLEKAG+ VIQIDEAALR      +++   YL WAV +FR       D T  HTHMCYS    +  SI+
Sbjct:  507 LDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWITYAQSLTNKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVEAFRITANGVQDDTQIHTHMCYSEFNDIIASIA 664          
BLAST of EY702183 vs. ExPASy Swiss-Prot
Match: METE_BURCJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=metE PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.669e-53
Identity = 101/158 (63.92%), Postives = 121/158 (76.58%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALRXXXAXXKSEHAFYLDWAVHSFRNHNCXXSDTTXDHTHMCYSNSTTLSHSIS 475
            L G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLE+AG+ VIQIDEAALR      +++ + YL WAV SFR       D T  HTHMCYS    +  SI+
Sbjct:  507 LDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWITYAQSLTNKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEQAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIA 664          
The following BLAST results are available for this feature:
BLAST of EY702183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_ARATH1.361e-7383.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SOLSC7.470e-7284.085-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR9.756e-7283.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO1.664e-7183.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_FLAJ12.414e-5465.195-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORA15.378e-5463.925-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MARAV7.024e-5462.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ALHEH9.174e-5465.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCM2.669e-5363.925-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCJ2.669e-5363.925-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-A03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702183 ID=EY702183; Name=EY702183; organism=Citrus sinensis; type=EST; length=568bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGNAANGNNATGCTCNTANGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAAATCACAACTGT
NGGNCGTCAGACACTACCCNAGATCACACCCACATGTGCTACTCCAACTC
AACGACATTATCCCACTCAATATCGACATGGATGCTGATGTGATCACCAT
TGAGACTCTCGTTCTGATGAGAAGCTCTGTCTGTCTTCCGTGAGGAGTCA
AGATGGTGCTGGAATTGC
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