EY702182

Overview
NameEY702182
Unique NameEY702182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length942
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702182 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.298e-50
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 2
Query:   80 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGQ 334
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRPAWYKEKVYP NKVP+LEHN Q
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQ 93          

HSP 2 Score: 58.9214 bits (141), Expect = 4.298e-50
Identity = 25/38 (65.79%), Postives = 34/38 (89.47%), Query Frame = 3
Query:  333 KVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFS 446
            +V GESLDL+KY+D+NFEGP+LLPDD EK++ A+EL +
Sbjct:   93 QVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLA 130          

HSP 3 Score: 44.2838 bits (103), Expect = 4.298e-50
Identity = 23/47 (48.94%), Postives = 28/47 (59.57%), Query Frame = 1
Query:  448 HIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDGGPFFLGQF 582
            + D F    Y+S   KGD   +A  A D +E AL KF+ GPFFLGQF
Sbjct:  131 YTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQF 177          
BLAST of EY702182 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.298e-50
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 2
Query:   80 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGQ 334
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRPAWYKEKVYP NKVP+LEHN Q
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQ 93          

HSP 2 Score: 58.9214 bits (141), Expect = 4.298e-50
Identity = 25/38 (65.79%), Postives = 34/38 (89.47%), Query Frame = 3
Query:  333 KVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFS 446
            +V GESLDL+KY+D+NFEGP+LLPDD EK++ A+EL +
Sbjct:   93 QVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLA 130          

HSP 3 Score: 44.2838 bits (103), Expect = 4.298e-50
Identity = 23/47 (48.94%), Postives = 28/47 (59.57%), Query Frame = 1
Query:  448 HIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDGGPFFLGQF 582
            + D F    Y+S   KGD   +A  A D +E AL KF+ GPFFLGQF
Sbjct:  131 YTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLGQF 177          
BLAST of EY702182 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.577e-46
Identity = 56/84 (66.67%), Postives = 67/84 (79.76%), Query Frame = 2
Query:   83 TTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGQ 334
            ++ +E LP  L S +E P LFDGT RLYI Y CPFAQRAWI RN+KGLQDKI+LV ++LQD+PAWYKEKVY    VP+LEHNG+
Sbjct:    9 SSGKEALPAALGSASEPPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTVPSLEHNGK 92          

HSP 2 Score: 65.855 bits (159), Expect = 5.577e-46
Identity = 28/38 (73.68%), Postives = 36/38 (94.74%), Query Frame = 3
Query:  333 KVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFS 446
            K++GESLDLIKY+DS+FEGP+LLP+DPEKR+ ADEL +
Sbjct:   92 KIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELIA 129          

HSP 3 Score: 39.6614 bits (91), Expect = 5.577e-46
Identity = 27/73 (36.99%), Postives = 37/73 (50.68%), Query Frame = 1
Query:  448 HIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDGGPFFLGQFRQGGHSLYSILVRDSRYSLSEKIKYE 660
            + + FT  +Y+    K D + +   A D +E AL KF  GPFFLGQF     +  +I+ R   Y  S   KYE
Sbjct:  130 YANAFTKALYSPLISKADLSAETVAALDKIEAALSKFGDGPFFLGQFSLVDIAYVTIIERIQIY-YSHIRKYE 201          
BLAST of EY702182 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.876e-44
Identity = 52/85 (61.18%), Postives = 70/85 (82.35%), Query Frame = 2
Query:   80 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGQ 334
            +++ +E+LPP L S ++ PP+FDGT RLYI Y CPFAQRAW+TRN KGLQDK++LV ++LQD+PAWYK+KVY    VP+LEH+ +
Sbjct:    8 SSSVKESLPPALGSTSQPPPVFDGTTRLYICYFCPFAQRAWVTRNLKGLQDKMELVAIDLQDKPAWYKDKVYAQGTVPSLEHDSE 92          

HSP 2 Score: 60.077 bits (144), Expect = 2.876e-44
Identity = 26/39 (66.67%), Postives = 35/39 (89.74%), Query Frame = 3
Query:  330 AKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKIADELFS 446
            ++V GESLDLI+Y+DSNF+GP+LLP+D  KR+ ADELF+
Sbjct:   91 SEVRGESLDLIRYIDSNFDGPALLPEDAAKRQFADELFA 129          

HSP 3 Score: 39.2762 bits (90), Expect = 2.876e-44
Identity = 25/66 (37.88%), Postives = 31/66 (46.97%), Query Frame = 1
Query:  442 FPHIDTFTNDVYTSFKGDPA--KQAGPAFDYLEKALDKFDGGPFFLGQFRQGGHSLYSILVRDSRY 633
            F   + FT  +Y+      A   +   A D LE  L KFD GPFFLGQF     +  +IL R   Y
Sbjct:  128 FASANAFTKALYSPLLSHAAVSDEVVAALDKLEADLSKFDDGPFFLGQFSLADVAYVTILERVQIY 193          
The following BLAST results are available for this feature:
BLAST of EY702182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
IN21B_ORYSJ4.298e-5071.76Protein IN2-1 homolog B OS=Oryza sativa subsp. jap... [more]
IN21B_ORYSI4.298e-5071.76Protein IN2-1 homolog B OS=Oryza sativa subsp. ind... [more]
IN21A_ORYSJ5.577e-4666.67Protein IN2-1 homolog A OS=Oryza sativa subsp. jap... [more]
IN21_MAIZE2.876e-4461.18Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1[more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-004-A02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702182 ID=EY702182; Name=EY702182; organism=Citrus sinensis; type=EST; length=942bp
CCACGCGTCCGGATAACTTTCTTCTTCAAAGCAAAAGAAAAGCATTCAGG
AAACCTCTAGAGTCTTACCTTCCTCAATGGCCACCACAGCGCAAGAGAAT
CTTCCTCCACCGTTGGATTCGAAGGCCGAGCTACCACCTCTGTTCGATGG
AACTCCCAGGTTGTACATTTCTTACTCGTGCCCATTTGCTCAGCGTGCGT
GGATCACCAGGAACTACAAGGGATTACAAGACAAGATTAAGTTAGTTCCA
CTGAACCTCCAAGATAGGCCCGCTTGGTACAAGGAGAAGGTTTATCCTGC
TAACAAGGTTCCAGCACTGGAGCACAATGGCCAAAGTTATTGGAGAATCT
CTTGATTTGATTAAATATGTTGACAGCAATTTTGAAGGGCCTTCACTTTT
ACCTGATGATCCTGAGAAACGAAAGATTGCTGATGAACTGTTTTCCCCAC
ATCGATACCTTCACCAACGATGTGTATACTTCATTCAAAGGAGACCCAGC
AAAACAAGCTGGTCCTGCTTTTGATTACTTAGAGAAGGCCCTTGATAAAT
TTGATGGTGGGCCGTTCTTCCTTGGACAGTTCCGTCAGGGGGGACATAGC
CTATATTCCATTTTGGTGAGAGATTCCCGATACTCCTTATCAGAAAAAAT
TAAGTATGAACATCACTGCAAGGCAAGGCCTAAACTGGGCACCATGGAAT
TGAAGAGTTTAAAAAGCTCGAATGCTTAAAAGTCAACAAAAAGGAAATAC
CAAACAATTTCTTTAAATCTTCCGGGACCCGTTCCGGGGGCAAACAAAGG
AACCTGAAATACAACTTTCTATAAATCCAATAAATTACATTGGGTGGGCG
GGTTTGGAAAATCTCCTAATAATAACCTCCCCGGTTACCACTTTAACATT
TGTTTACCATATAAACTCTTGAACCTTTCTTGTATTCGTAAC
back to top