EY702181
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702181 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.682e-44 Identity = 94/134 (70.15%), Postives = 102/134 (76.12%), Query Frame = 3 Query: 3 TRPDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVGSISARALVNSKEAAPTFEPTKG-----WTMGRSLLRSTENIDWCQNPQK 389 T DFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRARVYDDEVR WI+G+GV SI + LVNSKE PTFE K G L++ EN+ Q K Sbjct: 283 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSI-GKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADK 415
BLAST of EY702181 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.071e-43 Identity = 87/106 (82.08%), Postives = 92/106 (86.79%), Query Frame = 3 Query: 3 TRPDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVGSISARALVNSKEAAPTFEPTK 320 T DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRARVY DEVR W+S +GV +I + LVNSKE P+FE K Sbjct: 283 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTI-GKKLVNSKEGPPSFEQPK 387
BLAST of EY702181 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.547e-42 Identity = 90/134 (67.16%), Postives = 100/134 (74.63%), Query Frame = 3 Query: 3 TRPDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVGSISARALVNSKEAAPTFEPTKG-----WTMGRSLLRSTENIDWCQNPQK 389 T DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRARVYDDEVR W+ IGV +IS R LVNS+E PTF+ K G L++ EN+ Q K Sbjct: 270 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKR-LVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADK 402
BLAST of EY702181 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.547e-42 Identity = 90/134 (67.16%), Postives = 99/134 (73.88%), Query Frame = 3 Query: 3 TRPDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVGSISARALVNSKEAAPTFEPTKG-----WTMGRSLLRSTENIDWCQNPQK 389 T DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRARVYDDEVR W+S +GV +I + LVNSKE PTFE K G L+ EN+ Q K Sbjct: 283 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTI-GKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADK 415
BLAST of EY702181 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 2.020e-42 Identity = 88/134 (65.67%), Postives = 100/134 (74.63%), Query Frame = 3 Query: 3 TRPDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVGSISARALVNSKEAAPTFEPTKG-----WTMGRSLLRSTENIDWCQNPQK 389 T DFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR D V ++DI KLVDTFPGQSIDFFGALRARVYDDEVR WISG+GV + + + LVNSKE PTF+ K G L++ EN+ Q K Sbjct: 285 TGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDA-TGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADK 417
BLAST of EY702181 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 1.003e-41 Identity = 86/126 (68.25%), Postives = 97/126 (76.98%), Query Frame = 3 Query: 3 TRPDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVGSISARALVNSKEAAPTFEPTKG-----WTMGRSLLRSTENI 365 T DFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRARVYDDEVR W+S GV +I R LVNS+E P FE K G L++ EN+ Sbjct: 274 TGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKR-LVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENV 398
BLAST of EY702181 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.310e-41 Identity = 87/129 (67.44%), Postives = 101/129 (78.29%), Query Frame = 3 Query: 3 TRPDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVGSISARALVNSKEAAPTFEPTKGWTMGRSLLRSTENIDWCQNPQK 389 T DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D V + DIV+LVD PGQSIDFFGALRARVYDDEVR WISG+GV S+ + LVNSKE PTF+ K T+ + LL ++ + +N ++ Sbjct: 287 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSV-GKKLVNSKEGPPTFDQPK-MTLDKLLLYASMLVQEQENVKR 413
BLAST of EY702181 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 1.710e-41 Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 3 Query: 3 TRPDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVGSISARALVNSKEAAPTFEPTK 320 T DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D V ++ +V+LVDTFPGQSIDFFGALRARVYDDEVR W+S GV +I AR LVNSKE PTFE K Sbjct: 279 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENI-ARKLVNSKEGPPTFEQPK 383
BLAST of EY702181 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.488e-41 Identity = 83/126 (65.87%), Postives = 97/126 (76.98%), Query Frame = 3 Query: 3 TRPDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVGSISARALVNSKEAAPTFEPTKGWT-----MGRSLLRSTENI 365 T DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ ++K+VDTFPGQSIDFFGALRARVYDDEVR W+SG G+ +I + L+NS + PTFE K G L++ EN+ Sbjct: 287 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDK-LLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENV 411
BLAST of EY702181 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.109e-40 Identity = 83/126 (65.87%), Postives = 97/126 (76.98%), Query Frame = 3 Query: 3 TRPDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVGSISARALVNSKEAAPTFEPTKG-----WTMGRSLLRSTENI 365 T DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ +VK+VD+FPGQSIDFFGALRARVYDDEVR W+SG G+ I + L+NS++ PTFE K G L++ EN+ Sbjct: 282 TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEK-LLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENV 406 The following BLAST results are available for this feature:
BLAST of EY702181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702181 ID=EY702181; Name=EY702181; organism=Citrus sinensis; type=EST; length=866bpback to top |