EY702178

Overview
NameEY702178
Unique NameEY702178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702178 vs. ExPASy Swiss-Prot
Match: RPTOR_DICDI (Protein raptor homolog OS=Dictyostelium discoideum GN=raptor PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.767e-23
Identity = 61/167 (36.53%), Postives = 97/167 (58.08%), Query Frame = 3
Query:   63 SISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACVSIH 563
            S+    A++  G   +AGF DG V+L+D R P    C +   T+    +V +S    L    +VS S  G+I+F    +++ +  TI  +   +S+ +VH +AP+IA GS  Q IK+ +  GE + TIRYH   F+ Q+IG V+C+ FHPY +L+ AG+ D+ +SI+
Sbjct: 1335 SVVTCMANEKRGPLFSAGFSDGLVKLFDQRIPGKYSCVSTL-TEHKSYIVNVSMPASLGGKTVVSGSSTGEIKFWQ-HSYECSSTTIH-NNDVISSFSVHEYAPLIACGSQNQRIKIMNFTGEDVCTIRYHD-GFLGQRIGPVSCVAFHPYNILMGAGATDSIISIY 1497          
BLAST of EY702178 vs. ExPASy Swiss-Prot
Match: MIP1_SCHPO (WD repeat-containing protein mip1 OS=Schizosaccharomyces pombe GN=mip1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.022e-19
Identity = 64/180 (35.56%), Postives = 103/180 (57.22%), Query Frame = 3
Query:   42 IPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTP--DMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIR-NHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQ-KIGSVNCLTFHPYQVLLAAG-SADACVSIHA 566
            +P  S  SI++LT+  V    + AGF DG +R+YD R P  D L    + H+ ++   V +  Q      +++SAS  G+++  DIR NH  +  T       L++L VH HAP+ A+GS+ Q IK++   G+ + T R  +P F+ Q K  S+ CL FHP+ +LLA G + D+ V++++
Sbjct: 1127 LPVRSSNSITSLTSDLVGCNIIVAGFSDGVLRVYDKRLPARDSLTDVWKEHSSEI---VNVEMQSS-GMRELISASSDGEVKLWDIRMNH--SLQTFSTDNSGLTSLTVHSHAPVYATGSSNQSIKIWDTLGQNINTFR-ENPRFLNQPKPSSLMCLKFHPHHLLLACGDNTDSRVNLYS 1299          
BLAST of EY702178 vs. ExPASy Swiss-Prot
Match: RPTOR_HUMAN (Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.712e-18
Identity = 59/181 (32.60%), Postives = 97/181 (53.59%), Query Frame = 3
Query:   24 QQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACVSIHA 566
            +  V  IP+ +D  +++L+    H   + AG  DGS+R+YD R   +  C    + +    VV  S Q   D   IVS S  GD++  D R  +   + +   +G L+AL +H  A +IA GS  Q   +++  GE +  I+Y+   FM Q++G+++CL FHP+   LA GS D  +S+++
Sbjct: 1155 EMKVQDIPTGADSCVTSLSCDS-HRSLIVAGLGDGSIRVYDRRMA-LSECRVMTYREHTAWVVKASLQKRPD-GHIVSVSVNGDVRIFDPRMPESVNV-LQIVKG-LTALDIHPQADLIACGSVNQFTAIYNSSGELINNIKYYD-GFMGQRVGAISCLAFHPHWPHLAVGSNDYYISVYS 1329          
BLAST of EY702178 vs. ExPASy Swiss-Prot
Match: RPTOR_MOUSE (Regulatory-associated protein of mTOR OS=Mus musculus GN=Rptor PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.109e-17
Identity = 60/180 (33.33%), Postives = 97/180 (53.89%), Query Frame = 3
Query:   33 VNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTP--DMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACVSIHA 566
            V  IP+ +D  +++L+    H   + AG  DGS+R+YD R    +  V + R HT  V +        G     IVS S  GD++F D R  +   + +   +G L+AL +H  A +IA GS  Q   +++  GE +  I+Y+   FM Q++G+++CL FHP+   LA GS D  +S+++
Sbjct: 1158 VQDIPTGADSCVTSLSCDS-HRSLIVAGLGDGSIRVYDRRMALSECRVMTYREHTAWVVKAYLQKHPEG----HIVSVSVNGDVRFFDPRMPESVNV-MQIVKG-LTALDIHPQANLIACGSMNQFTAIYNGNGELINNIKYYD-GFMGQRVGAISCLAFHPHWPHLAVGSNDYYISVYS 1329          
BLAST of EY702178 vs. ExPASy Swiss-Prot
Match: KOG1_YEAST (Target of rapamycin complex 1 subunit KOG1 OS=Saccharomyces cerevisiae GN=KOG1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.701e-11
Identity = 55/204 (26.96%), Postives = 101/204 (49.51%), Query Frame = 3
Query:   42 IPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTP--DMLVCSTRP-HTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGS----------LSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHP----------------SFMAQKIGSVNCLTFHPYQVLLAA-GSADACVSIH 563
            IP+ +   I++LTA Q+ G    AGF DGS+R+YD R    D ++   R  + +Q   +  +  Q G    ++VS +  G ++  DIR+       +D +  S          ++ + VH HAPIIA+G+ +  IK+++  G+ L + +  H                 S+ +     ++ + FHP+++++AA  S D+ V+I+
Sbjct: 1347 IPAKTSSLITSLTADQLAGNIFVAGFADGSLRVYDRRLDPRDSMIRRWRAGNDKQGVWINNVHLQRG-GYRELVSGATNGVVELWDIRSEDPVESFVDQNVTSQYGSQQKPTTMTCMQVHEHAPIIATGTKQ--IKIWTTSGDLLNSFKNSHNNGVTSTLAATGIPKSLSYSSTSDAFLSSMAFHPHRMMIAATNSHDSIVNIY 1547          
The following BLAST results are available for this feature:
BLAST of EY702178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RPTOR_DICDI1.767e-2336.53Protein raptor homolog OS=Dictyostelium discoideum... [more]
MIP1_SCHPO2.022e-1935.56WD repeat-containing protein mip1 OS=Schizosacchar... [more]
RPTOR_HUMAN1.712e-1832.60Regulatory-associated protein of mTOR OS=Homo sapi... [more]
RPTOR_MOUSE1.109e-1733.33Regulatory-associated protein of mTOR OS=Mus muscu... [more]
KOG1_YEAST7.701e-1126.96Target of rapamycin complex 1 subunit KOG1 OS=Sacc... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-H09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702178 ID=EY702178; Name=EY702178; organism=Citrus sinensis; type=EST; length=919bp
CCACGCGTCCGCTCGAAAAGGAGCAGCAGATGGTCAATCCAATTCCTTCA
TCATCAGACTGCAGCATCTCAGCACTGACTGCTTCTCAAGTTCATGGGGG
TCAGCTTGCTGCTGGTTTCGTGGATGGCTCTGTCAGACTTTATGATGTTC
GCACACCTGACATGCTTGTCTGTTCGACACGACCGCATACTCAGCAAGTA
GAAAGAGTTGTGGGGATCAGCTTTCAGCCTGGACTGGATCCGGCAAAGAT
TGTCAGTGCATCACAAGCTGGTGACATCCAATTCCTTGATATTAGAAACC
ACAAGGATGCCTATCTTACAATTGATGCTCACAGGGGCTCTTTGTCAGCT
TTAGCTGTTCATAGACATGCCCCAATCATTGCCAGTGGGTCAGCAAAACA
GCTGATCAAAGTTTTCAGTTTGGAGGGTGAACAACTGGGCACCATTAGAT
ACCACCATCCGAGCTTCATGGCCCAGAAGATTGGTTCTGTAAATTGCCTC
ACCTTCCACCCATACCAAGTGCTTCTTGCTGCCGGTTCTGCAGATGCCTG
TGTCTCTATACATGCTTGATTTGATGTCAACTCACGTGCAAGAAATGAAC
TATTTTTACTGGATTCAAATTCCCAAATTGGAAGGCACCAAATTGATGGC
AGGCCAACCTGTCAACAATGCACATCCTTATTCCAGTCATGAAATGCCAC
CCGTTCCTGCTGCCGCAGTGGTCCTTCACTGTTGATTAATTGGCAAACCC
GGGTCCCGGAAAATTCAAAAAGAAGTTGTAAGCTATAACTTCATTTGCCC
CCAATGTGGAATCCTCTAAAATTTTGGGGAAAAACACCCCAACTTAAGGG
GGGGCTTTGGAAAAAAATTTGTTATTAAGGAAAATTGGTGAAAATAGATT
TTATTTTTCCTTTTACCCC
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