EY702175

Overview
NameEY702175
Unique NameEY702175
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3474 contig Csv1_Contig3474:135..1041. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.496e-48
Identity = 107/213 (50.23%), Postives = 127/213 (59.62%), Query Frame = 2
Query:   14 QRWQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWWEVFXXXXXXXXXXXXXRREYSDQQQEGNVPVVGLGSGSCSSPEKVAQGRYDHILETFAEKYVQPKLFAMQXXXXXXXXXXXXXIMPNLPLGGADPEPVLSLGSG----------PTW 622
            QRW+PEEDAIL AYV+QYGP+EW+L+SQRM + L+RD KSCLERWKNYL+PGIKKGSL+ +EQ LVI LQAK+GNKWKKIA+EVPGRTAKRLGKWWEVF             +RE  D+ +    P +      C      A GRYD +LE FA+K V      M               M + P   + P   LSL S           PTW
Sbjct:   10 QRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVF---------KEKQQRELRDRDRRRLPPPLDGDERGC------AGGRYDWLLEDFADKLVNDHHRRMMAAPILPPW------MSSSPSSSSSPSVTLSLASAAVAPAPAAPPPTW 201          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.308e-47
Identity = 96/158 (60.76%), Postives = 116/158 (73.42%), Query Frame = 2
Query:   14 QRWQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWWEVFXXXXXXXXXXXXXRREYSDQQQEGNVPVVGLGSGSCSSPEKVAQGRYDHILETFAEKYV 487
            QRW+PEEDA+L+AYV+QYGP+EW+L+SQRM   L+RD KSCLERWKNYL+PGIKKGSL+ EEQ LVI LQAK+GNKWKKIA+EVPGRTAKRLGKWWEVF             +RE  D ++    P          SP++  +GRY+ +LE FAEK V
Sbjct:    5 QRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVF---------KEKQQRELRDSRRPPPEP----------SPDE--RGRYEWLLENFAEKLV 141          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.806e-47
Identity = 93/161 (57.76%), Postives = 115/161 (71.43%), Query Frame = 2
Query:   14 QRWQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWWEVFXXXXXXXXXXXXXRREYSDQQQEGNVPVVGLGSGSCSSPEKVAQGRYDHILETFAEKYVQPK 496
            QRW  EEDA+L+AYV+Q+GP+EW+L+S+RM K LNRD KSCLERWKNYLKPGIKKGSL+ EEQ LVI LQ K+GNKWKKIA+EVPGRTAKRLGKWWEVF             + +   +++E N  V           E + + +YD ILE+FAEK V+ +
Sbjct:    5 QRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVF-------------KEKQQREEKESNKRV-----------EPIDESKYDRILESFAEKLVKER 141          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.228e-22
Identity = 48/94 (51.06%), Postives = 63/94 (67.02%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W+PEED ILK+YV+ +G   W  IS+R G  L R  KSC  RWKNYL+P IK+GS+SP+EQ L+I +    GN+W  IA  +PGRT   +  +W
Sbjct:   17 WKPEEDMILKSYVETHGEGNWADISRRSG--LKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYW 108          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.966e-20
Identity = 45/95 (47.37%), Postives = 60/95 (63.16%), Query Frame = 2
Query:   17 RWQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            +W+PEED ILK YV QYG + W  + +R G  L  +P SC  RW N+LKP +KKG  + EE+  V+ L A  GNKW ++A E PGRT   +  +W
Sbjct:   20 KWKPEEDRILKDYVIQYGDRTWTHVPKRTG--LPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFW 112          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  +ED +L  +V  +G + W+ I++  G  LNR  KSC  RW NYL PG+K+G ++P+E+ LV+ L AK+GN+W KIA ++PGRT   +  +W
Sbjct:   12 WTEQEDILLVNFVHLFGDRRWDFIAKVSG--LNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYW 103          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  +ED +L  +V  +G + W+ +++  G  LNR  KSC  RW NYL PG+K+G ++P+E+ LV+ L AK+GN+W KIA ++PGRT   +  +W
Sbjct:   13 WTEQEDILLVNFVHLFGDRRWDFVAKVSG--LNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYW 104          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  EED IL  ++  +G   WN I++  G  L R  KSC  RW NYL+P +++G+++PEEQ L++ L AK+GN+W KIA  +PGRT   +  +W
Sbjct:   18 WTMEEDLILINFISNHGEGVWNTIARSAG--LKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYW 109          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.571e-19
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  EED IL  Y+  +G   WN +++  G  L R  KSC  RW NYL+P +++G+++PEEQ L++ L AK+GN+W KIA  +PGRT   +  +W
Sbjct:   18 WTMEEDLILINYIANHGEGVWNSLARSAG--LKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYW 109          
BLAST of EY702175 vs. ExPASy Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.385e-19
Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 2
Query:   20 WQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKGSLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWW 301
            W  EED IL  Y+  +G   WN +++  G  L R  KSC  RW NYL+P +++G+++PEEQ +++ L AK+GN+W KIA  +PGRT   +  +W
Sbjct:   25 WTMEEDLILINYIANHGDGVWNSLAKSAG--LKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFW 116          
The following BLAST results are available for this feature:
BLAST of EY702175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
RS2_ORYSJ4.496e-4850.23Protein rough sheath 2 homolog OS=Oryza sativa sub... [more]
RS2_MAIZE1.308e-4760.76Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=... [more]
AS1_ARATH3.806e-4757.76Transcription factor AS1 OS=Arabidopsis thaliana G... [more]
MYB82_ARATH7.228e-2251.06Transcription factor MYB82 OS=Arabidopsis thaliana... [more]
MY104_ARATH3.966e-2047.37Transcription factor MYB104 OS=Arabidopsis thalian... [more]
MYB48_ARATH6.765e-2044.68Transcription factor MYB48 OS=Arabidopsis thaliana... [more]
MYB59_ARATH8.836e-2043.62Transcription factor MYB59 OS=Arabidopsis thaliana... [more]
MYB40_ANTMA1.968e-1944.68Myb-related protein 340 OS=Antirrhinum majus GN=MY... [more]
MYB05_ANTMA2.571e-1944.68Myb-related protein 305 OS=Antirrhinum majus GN=MY... [more]
MYB21_ARATH4.385e-1943.62Transcription factor MYB21 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-H06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702175 ID=EY702175; Name=EY702175; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGGCAACGTTGGCAACCAGAAGAAGACGCAATCTTGAAAG
CATACGTGAAGCAATATGGCCCCAAAGAATGGAACCTCATCTCACAACGC
ATGGGCAAAACCCTCAACCGTGACCCCAAATCTTGCCTCGAGCGCTGGAA
AAACTACCTCAAACCGGGCATCAAAAAGGGTTCTTTATCCCCAGAGGAGC
AATCTCTAGTCATTTCGTTGCAGGCCAAATACGGCAACAAGTGGAAGAAG
ATCGCGAGTGAAGTCCCCGGGAGAACGGCCAAGAGATTGGGAAAGTGGTG
GGAGGTTTTTAAGGAGAAGCAGTTGAAGCAGCTGCACAAGGAGAAGCAGA
GAAGGGAATATTCCGATCAGCAGCAGGAGGGGAATGTTCCGGTAGTGGGT
TTGGGTTCTGGTTCTTGTTCTTCGCCTGAGAAAGTCGCTCAGGGGAGATA
TGATCATATCTTAGAGACTTTTGCTGAGAAGTACGTGCAGCCTAAGCTTT
TCGCGATGCAAGCATTGAACTTGAATTTGAACCCGGTCCCTGCCAATGCT
ATTATGCCTAATCTACCACTTGGCGGTGCTGATCCTGAACCGGTTCTTTC
ACTTGGGTCCGGTCCTACGTGGATGAATAATCATAATCATAATCATCATA
CCAGTGGTTCATCTTTGACGTCTTCAACTTCATCTACTACTACAGCTTCT
CCTAGTGTGAGTCTGTCGCTTTCTCCATCTGAAACCGGGATTGAACTGGG
GGATATGAACCCTGTGGCCCGGNTCATGCCGGGTCCGCAAGTGGGTACTT
TGGTACAGTACTGAAAAGAGCTTGAAGAGGGGAGGCAAAGCTGGGTGCAG
CATAAAAAGGAGGCACTTNGGAGCTGAGCAGGCTGGAAGCAGCAGTGGAG
T
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