EY702143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702143 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.244e-38 Identity = 73/89 (82.02%), Postives = 85/89 (95.51%), Query Frame = 2 Query: 23 FSLTTLIWIEVIVIGYIEYQRNAELDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATFN 289 FSLTTLIWIEV+V+GYIE+QRN+ELDP KR+YPGGYFDPLGLA+DP KL+ L+LAEIKH+RLAMVAFLIF +QAAFTGKGP+SF+ATFN Sbjct: 187 FSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLATFN 275
BLAST of EY702143 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.490e-30 Identity = 68/94 (72.34%), Postives = 78/94 (82.98%), Query Frame = 2 Query: 23 FSLTTLIWIEVIVIGYIEYQRNAELDPVKRLYPGG-YFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATFNQ*PI 301 FS++TLIWIEV+VIGYIE+QRNAELD KRLYPGG +FDPLGLA+DP K LQLAEIKHARLAMVAFL F +QAA TGKGP++ AT P+ Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 279
BLAST of EY702143 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.547e-30 Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 2 Query: 23 FSLTTLIWIEVIVIGYIEYQRNAELDPVKRLYPGG-YFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATFNQ*PI 301 FS++TLIWIEV+VIGYIE+QRNAELD KRLYPGG +FDPLGLASDP K LQLAEIKHARLAMV FL F +QAA TGKGP++ AT P+ Sbjct: 183 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPL 276
BLAST of EY702143 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.369e-20 Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 23 FSLTTLIWIEVIVIGYIEYQRNAELDPVKRLYPGGYFDPLGLAS-DPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATF 286 FS+T LIWIEVI++G E+ RN+E +P KR YPGG FDPL LAS D + L+ AEIKHARLAMV+F +G+QA TG+G + +A F Sbjct: 182 FSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGGVFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLAKF 270
BLAST of EY702143 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.123e-17 Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 2 Query: 26 SLTTLIWIEVIVIGYIEYQRNAELDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGI-QAAFTGKGPISFVAT 283 +L T++ IE + I + E QR E DP K+ YPGG FDPLG + DP K E L+L EIK+ RLAM+AF+ F + Q+A+ G GP+ +AT Sbjct: 137 NLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLAT 223
BLAST of EY702143 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.326e-15 Identity = 40/87 (45.98%), Postives = 61/87 (70.11%), Query Frame = 2 Query: 26 SLTTLIWIEVIVIGYIEYQRNAELDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGI-QAAFTGKGPISFVAT 283 +L T++ IE + I ++E+QR+ E D K+ YPGG FDPLG + DP K E L++ EIK+ RLA++A + F + Q+A+ G GP+ +AT Sbjct: 138 TLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLAT 224
BLAST of EY702143 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 26 SLTTLIWIEVIVIGYIEYQRNAE-LDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATFNQ*PIS*NFM 316 +L + EV+++G EY R LD +L+PGG FDPLGLA DP + L++ EIK+ RLAM A L F IQA TG+GP+ +A P N + Sbjct: 170 NLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLL 267
BLAST of EY702143 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.216e-12 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 26 SLTTLIWIEVIVIGYIE-YQRNAE----LDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPI 268 S+ + ++V+++G E Y+ N LD + LYPGG FDPLGLA DP L++ EIK+ RLAM + L F +QA TGKGP+ Sbjct: 142 SIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPV 227
BLAST of EY702143 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12 Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = 2 Query: 41 IWI-EVIVIGYIEYQRNAELDPVKR----LYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATFNQ*PIS*N 310 IW +VI++G +E R A P+ LYPGG FDPLGLA+DP L++ E+K+ RLAM + F +QA TGKGPI +A P++ N Sbjct: 161 IWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
BLAST of EY702143 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12 Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = 2 Query: 41 IWI-EVIVIGYIEYQRNAELDPVKR----LYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVATFNQ*PIS*N 310 IW +VI++G +E R A P+ LYPGG FDPLGLA+DP L++ EIK+ RLAM + F +QA TGKGP+ +A P++ N Sbjct: 160 IWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254 The following BLAST results are available for this feature:
BLAST of EY702143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702143 ID=EY702143; Name=EY702143; organism=Citrus sinensis; type=EST; length=661bpback to top |