EY702138

Overview
NameEY702138
Unique NameEY702138
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12761 contig Csv1_Contig12761:5..924. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702138 vs. ExPASy Swiss-Prot
Match: GDIA_PANTR (Rab GDP dissociation inhibitor alpha OS=Pan troglodytes GN=GDI1 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 3.265e-78
Identity = 141/238 (59.24%), Postives = 189/238 (79.41%), Query Frame = 3
Query:  141 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIARYGLDDNTIDFIGHALALHRDDRYLNEPASDTVKRMKLYAKSIGPFPGRSPYIYPPIGLGKVASG 851
            MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+  L +L+KRF+  E PP  +G  RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    + R++  ++ L  + IDF GHALAL+R D YL++P  +TV R+KLY++S+  + G+SPY+YP  GLG++  G
Sbjct:    1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLYGLGELPQG 237          
BLAST of EY702138 vs. ExPASy Swiss-Prot
Match: GDIA_MOUSE (Rab GDP dissociation inhibitor alpha OS=Mus musculus GN=Gdi1 PE=1 SV=3)

HSP 1 Score: 291.967 bits (746), Expect = 3.265e-78
Identity = 140/238 (58.82%), Postives = 189/238 (79.41%), Query Frame = 3
Query:  141 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIARYGLDDNTIDFIGHALALHRDDRYLNEPASDTVKRMKLYAKSIGPFPGRSPYIYPPIGLGKVASG 851
            MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+  L +L+KRF+  E PP  +G  RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    + R++  ++ L  + IDF GHALAL+R D YL++P  +T+ R+KLY++S+  + G+SPY+YP  GLG++  G
Sbjct:    1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQILEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQG 237          
BLAST of EY702138 vs. ExPASy Swiss-Prot
Match: GDIA_HUMAN (Rab GDP dissociation inhibitor alpha OS=Homo sapiens GN=GDI1 PE=1 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 3.265e-78
Identity = 141/238 (59.24%), Postives = 189/238 (79.41%), Query Frame = 3
Query:  141 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIARYGLDDNTIDFIGHALALHRDDRYLNEPASDTVKRMKLYAKSIGPFPGRSPYIYPPIGLGKVASG 851
            MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+  L +L+KRF+  E PP  +G  RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    + R++  ++ L  + IDF GHALAL+R D YL++P  +TV R+KLY++S+  + G+SPY+YP  GLG++  G
Sbjct:    1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLYGLGELPQG 237          
BLAST of EY702138 vs. ExPASy Swiss-Prot
Match: GDIA_RAT (Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus GN=Gdi1 PE=1 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 4.264e-78
Identity = 140/238 (58.82%), Postives = 189/238 (79.41%), Query Frame = 3
Query:  141 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIARYGLDDNTIDFIGHALALHRDDRYLNEPASDTVKRMKLYAKSIGPFPGRSPYIYPPIGLGKVASG 851
            MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+  L +L+KRF+  E PP  +G  RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    + R++  ++ L  + IDF GHALAL+R D YL++P  +T+ R+KLY++S+  + G+SPY+YP  GLG++  G
Sbjct:    1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQG 237          
BLAST of EY702138 vs. ExPASy Swiss-Prot
Match: GDIA_PONPY (Rab GDP dissociation inhibitor alpha OS=Pongo pygmaeus GN=GDI1 PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 4.264e-78
Identity = 140/238 (58.82%), Postives = 189/238 (79.41%), Query Frame = 3
Query:  141 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIARYGLDDNTIDFIGHALALHRDDRYLNEPASDTVKRMKLYAKSIGPFPGRSPYIYPPIGLGKVASG 851
            MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+  L +L+KRF+  E PP  +G  RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    + R++  ++ L  + IDF GHALAL+R D YL++P  +T+ R+KLY++S+  + G+SPY+YP  GLG++  G
Sbjct:    1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQG 237          
BLAST of EY702138 vs. ExPASy Swiss-Prot
Match: GDIA_MACFA (Rab GDP dissociation inhibitor alpha OS=Macaca fascicularis GN=GDI1 PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 4.264e-78
Identity = 140/238 (58.82%), Postives = 189/238 (79.41%), Query Frame = 3
Query:  141 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIARYGLDDNTIDFIGHALALHRDDRYLNEPASDTVKRMKLYAKSIGPFPGRSPYIYPPIGLGKVASG 851
            MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+  L +L+KRF+  E PP  +G  RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    + R++  ++ L  + IDF GHALAL+R D YL++P  +T+ R+KLY++S+  + G+SPY+YP  GLG++  G
Sbjct:    1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQG 237          
BLAST of EY702138 vs. ExPASy Swiss-Prot
Match: GDIA_BOVIN (Rab GDP dissociation inhibitor alpha OS=Bos taurus GN=GDI1 PE=1 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 4.264e-78
Identity = 140/238 (58.82%), Postives = 189/238 (79.41%), Query Frame = 3
Query:  141 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIARYGLDDNTIDFIGHALALHRDDRYLNEPASDTVKRMKLYAKSIGPFPGRSPYIYPPIGLGKVASG 851
            MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+  L +L+KRF+  E PP  +G  RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    + R++  ++ L  + IDF GHALAL+R D YL++P  +T+ R+KLY++S+  + G+SPY+YP  GLG++  G
Sbjct:    1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQG 237          
BLAST of EY702138 vs. ExPASy Swiss-Prot
Match: GDIA_CANFA (Rab GDP dissociation inhibitor alpha OS=Canis familiaris GN=GDI1 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 7.274e-78
Identity = 139/238 (58.40%), Postives = 189/238 (79.41%), Query Frame = 3
Query:  141 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIARYGLDDNTIDFIGHALALHRDDRYLNEPASDTVKRMKLYAKSIGPFPGRSPYIYPPIGLGKVASG 851
            MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+  L +L+KRF+  E PP  +G  RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSF+Y  GK++KVP+T+ EAL S LMG+FEKRR RKF ++V ++DENDPKT EG+D    + R++  ++ L  + IDF GHALAL+R D YL++P  +T+ R+KLY++S+  + G+SPY+YP  GLG++  G
Sbjct:    1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPEAMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFIYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQSTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQG 237          
BLAST of EY702138 vs. ExPASy Swiss-Prot
Match: GDIB_BOVIN (Rab GDP dissociation inhibitor beta OS=Bos taurus GN=GDI2 PE=2 SV=3)

HSP 1 Score: 289.271 bits (739), Expect = 2.116e-77
Identity = 137/238 (57.56%), Postives = 188/238 (78.99%), Query Frame = 3
Query:  141 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIARYGLDDNTIDFIGHALALHRDDRYLNEPASDTVKRMKLYAKSIGPFPGRSPYIYPPIGLGKVASG 851
            M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+  ++ L+KRF+    PPA +G  RD+NVD+IPKF++ANG LV++L+ T+VT+YL FK  +GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DENDP+T EG+D  + + RE+  ++ L  + IDF GHALAL+R D YL++P  +T+ R+KLY++S+  + G+SPY+YP  GLG++  G
Sbjct:    1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPGAPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGIDPKKTSMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQG 237          
BLAST of EY702138 vs. ExPASy Swiss-Prot
Match: GDIB_PIG (Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 4.715e-77
Identity = 137/238 (57.56%), Postives = 186/238 (78.15%), Query Frame = 3
Query:  141 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIARYGLDDNTIDFIGHALALHRDDRYLNEPASDTVKRMKLYAKSIGPFPGRSPYIYPPIGLGKVASG 851
            M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGES+S+  ++ L+KRF     PPA +G  RD+NVD+IPKF++ANG LV++L+ T+VT+YL FK  +GSFVY  GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DENDP+T EG+D  +   RE+  ++ L  + IDF GHALAL+R D YL++P  +T+ R+KLY++S+  + G+SPY+YP  GLG++  G
Sbjct:    1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFNIPGAPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGVDPKKTAMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQG 237          
The following BLAST results are available for this feature:
BLAST of EY702138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
GDIA_PANTR3.265e-7859.24Rab GDP dissociation inhibitor alpha OS=Pan troglo... [more]
GDIA_MOUSE3.265e-7858.82Rab GDP dissociation inhibitor alpha OS=Mus muscul... [more]
GDIA_HUMAN3.265e-7859.24Rab GDP dissociation inhibitor alpha OS=Homo sapie... [more]
GDIA_RAT4.264e-7858.82Rab GDP dissociation inhibitor alpha OS=Rattus nor... [more]
GDIA_PONPY4.264e-7858.82Rab GDP dissociation inhibitor alpha OS=Pongo pygm... [more]
GDIA_MACFA4.264e-7858.82Rab GDP dissociation inhibitor alpha OS=Macaca fas... [more]
GDIA_BOVIN4.264e-7858.82Rab GDP dissociation inhibitor alpha OS=Bos taurus... [more]
GDIA_CANFA7.274e-7858.40Rab GDP dissociation inhibitor alpha OS=Canis fami... [more]
GDIB_BOVIN2.116e-7757.56Rab GDP dissociation inhibitor beta OS=Bos taurus ... [more]
GDIB_PIG4.715e-7757.56Rab GDP dissociation inhibitor beta OS=Sus scrofa ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-E03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702138 ID=EY702138; Name=EY702138; organism=Citrus sinensis; type=EST; length=922bp
CCACGCGTCCGCAAACAAAGCACCTCCTTCTCTCACTCTAATTCCTTTCT
TTGCTTCTATTAATATTACTCCCTTCACTTTGACCTAACCCACAAAACCC
TCTGAATCAGAAATCAAAAATCAAAAATCAAATCATCAACATGGATGAAG
AGTATGATGTCATCGTCTTGGGAACCGGTCTCAAGGAATGCATCCTCAGT
GGTCTCCTCTCTGTTGATGGCCTCAAGGTCCTGCACATGGACAGGAATGA
TTATTATGGAGGAGAGTCATCATCGCTCAATCTCATTCAGCTCTGGAAGA
GATTTAGGGGAAATGAACAACCTCCTGCTCACTTGGGCTCTAGTAGGGAT
TATAATGTTGACATGATCCCGAAGTTTATAATTGCAAATGGAGCTCTTGT
TCGTGTCCTCATTCATACTGATGTTACAAAGTATCTGTACTTCAAAGCTG
TGGATGGCAGCTTCGTCTATAATAAAGGAAAGGTCCACAAGGTGCCAGCA
ACTGATATGGAAGCGCTCAAATCTCCACTCATGGGTATTTTTGAGAAGCG
CCGTGCACGCAAGTTTTTCATTTATGTTCAAGATTATGATGAAAATGATC
CCAAAACACACGAGGGAATGGACTTGACCAGGGTGACCACTAGAGAGCTG
ATTGCGAGGTATGGTCTTGATGACAACACTATTGACTTCATTGGTCATGC
ATTGGCACTTCATAGAGATGATCGTTACTTAAACGAACCTGCTTCTGATA
CAGTGAAGAGAATGAAGTTATACGCCAAGTCTATTGGCCCATTTCCAGGA
AGATCACCATACATTTACCCTCCGATTGGCCTTGGGAAAGTGGCTTCAGG
CCTTTGCTCCGCCTAAAGGTGTTTATGGGGGGACCAAATATGTGAAAAAA
CTGAAGGCAAGGAAAGATTGAA
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