EY702122

Overview
NameEY702122
Unique NameEY702122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9955 contig Csv1_Contig9955:1..874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY702122 vs. ExPASy Swiss-Prot
Match: FK118_ARATH (F-box/kelch-repeat protein At5g42360 OS=Arabidopsis thaliana GN=At5g42360 PE=2 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.829e-99
Identity = 179/283 (63.25%), Postives = 218/283 (77.03%), Query Frame = 1 
Query:   13 FGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLXSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERSFWDWIQTSPFPPRVIEYYPKLVSSRGRLFMLSVSW 861
            F A+KDG  SG+IH  DVSQD+WHRI+  +LKGRFM+SV SI +++Y+VGG S       +DR+SFK+H+G+LVFSP  K+WRK+ASMR+ARS+PI+G +EV+ EFS +   Q+ QDRRF  SR+GG SDVYEDPHRLS+RRQ RNS D          KS++ IRQK D+    +SKRFVLIA+GG   +DEPLDSGEIYDS +N W E+QRLP+ FGVVS G++CNGIFY YSE DKL+GYDIER FW  IQTSP PPRV E+YPKLVS   RLFMLSVSW
Sbjct:  188 FAALKDGCSSGDIHGYDVSQDKWHRIETDLLKGRFMYSVTSIHEEIYIVGGRS-------MDRNSFKSHRGILVFSPSIKAWRKIASMRHARSLPIVGATEVTSEFSTMQTKQNRQDRRFHLSRVGGESDVYEDPHRLSVRRQNRNSADQ------NGTKSHRLIRQKLDRLNRNSSKRFVLIAIGGTGIFDEPLDSGEIYDSATNTWSEMQRLPMGFGVVSCGIICNGIFYAYSENDKLSGYDIERGFWITIQTSPIPPRVHEFYPKLVSCNHRLFMLSVSW 457
[Close]
BLAST of EY702122 vs. ExPASy Swiss-Prot
Match: FK117_ARATH (F-box/kelch-repeat protein At5g42350 OS=Arabidopsis thaliana GN=At5g42350 PE=2 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.829e-99
Identity = 179/283 (63.25%), Postives = 218/283 (77.03%), Query Frame = 1 
Query:   13 FGAVKDGYCSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDRSSFKTHKGVLVFSPLTKSWRKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKSYKFIRQKSDQSITKASKRFVLIAVGGLXSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETDKLAGYDIERSFWDWIQTSPFPPRVIEYYPKLVSSRGRLFMLSVSW 861
            F A+KDG  SG+IH  DVSQD+WHRI+  +LKGRFM+SV SI +++Y+VGG S       +DR+SFK+H+G+LVFSP  K+WRK+ASMR+ARS+PI+G +EV+ EFS +   Q+ QDRRF  SR+GG SDVYEDPHRLS+RRQ RNS D          KS++ IRQK D+    +SKRFVLIA+GG   +DEPLDSGEIYDS +N W E+QRLP+ FGVVS G++CNGIFY YSE DKL+GYDIER FW  IQTSP PPRV E+YPKLVS   RLFMLSVSW
Sbjct:  188 FAALKDGCSSGDIHGYDVSQDKWHRIETDLLKGRFMYSVTSIHEEIYIVGGRS-------MDRNSFKSHRGILVFSPSIKAWRKIASMRHARSLPIVGATEVTSEFSTMQTKQNRQDRRFHLSRVGGESDVYEDPHRLSVRRQNRNSADQ------NGTKSHRLIRQKLDRLNRNSSKRFVLIAIGGTGLFDEPLDSGEIYDSATNTWSEMQRLPMGFGVVSCGIICNGIFYAYSENDKLSGYDIERGFWITIQTSPIPPRVHEFYPKLVSCNHRLFMLSVSW 457
The following BLAST results are available for this feature:
BLAST of EY702122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
FK118_ARATH1.829e-9963.25F-box/kelch-repeat protein At5g42360 OS=Arabidopsi... [more]
FK117_ARATH1.829e-9963.25F-box/kelch-repeat protein At5g42350 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-C10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702122 ID=EY702122; Name=EY702122; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGGTTTGGTGCTGTTAAGGATGGCTATTGCTCTGGGGAGAT
TCATGCACTGGATGTTTCTCAAGACCAGTGGCATAGGATTGATGCCAGTA
TTCTCAAAGGAAGATTCATGTTCTCTGTTGTCAGCATCATGGATGATGTC
TATGTTGTTGGGGGTTGTTCAAGCTTGACCAGCTTTGGGAGGGTGGATAG
GAGTTCATTTAAGACGCACAAAGGGGTATTGGTATTTAGTCCCTTAACTA
AATCTTGGCGGAAAGTTGCATCTATGAGATATGCCAGATCAATGCCTATT
TTAGGAATATCTGAGGTGAGTCCGGAGTTCTCTATCATCCCATGTCATCA
GAGTCATCAAGATAGGCGTTTCCCCAGGTCACGACTTGGTGGGGTGTCAG
ATGTTTATGAGGATCCTCATAGGCTTTCACTAAGGCGTCAATACAGAAAT
TCTTTCGATGGATTTGAAGGTTCGTTGTTGCCCAACAGAAAGTCATATAA
GTTTATTAGACAAAAAAGTGATCAGTCAATCACAAAAGCCAGTAAAAGGT
TTGTTTTGATTGCTGTAGGAGGCCTGNGATCTTGGGATGAGCCCTTGGAT
TCTGGAGAAATATATGATTCTGTATCCAATAAATGGATGGAAATCCAGAG
GTTGCCAGTAGATTTTGGGGTTGTTTCTTCTGGAGTTGTTTGCAATGGGA
TATTTTATGTCTATTCTGAGACTGACAAACTGGCAGGATATGACATAGAA
AGAAGCTTCTGGGATTGGATCCAAACCTCTCCATTTCCTCCCCGTGTTAT
TGAGTACTACCCAAAACTTGTATCCTCTAGGGGNCGTCTATTCATGCTTT
CTGTCTCCTGGGGTGAAAGGGAT
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