EY720423

Overview
NameEY720423
Unique NameEY720423
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12791 contig Csv1_Contig12791:48..323. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
[Close]
BLAST of EY720423 vs. ExPASy Swiss-Prot
Match: Y091_CAUCR (Uncharacterized signaling protein CC_0091 OS=Caulobacter crescentus GN=CC_0091 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.728e-11
Identity = 33/87 (37.93%), Postives = 56/87 (64.37%), Query Frame = -2 
Query:    9 ARLGGDQFALVQ-ADIEQPYEAAELAQSILDDLEAEFALDHEQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKSRSRNRYQFY 266
            ARLGGD+F +VQ A  +QP  AAELA  +++ L A    D +++ + +++G++L+P+DG + E L+  A+  +  AK   R  Y+F+
Sbjct:  448 ARLGGDEFIVVQIAGGDQPAVAAELAGRLIEMLAAPVPFDGQELAMGSSLGVSLYPDDGRTAEALMANADMALYRAKESGRGVYRFF 534
[Close]
BLAST of EY720423 vs. ExPASy Swiss-Prot
Match: Y1727_PSEAE (Uncharacterized signaling protein PA1727 OS=Pseudomonas aeruginosa GN=PA1727 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.481e-11
Identity = 31/87 (35.63%), Postives = 54/87 (62.07%), Query Frame = -2 
Query:    9 LARLGGDQFALVQADIEQPYEAAELAQSILDDLEAEFALDHEQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKSRSRNRYQFY 269
            +ARLGGD+F L+  +  +P +AA LA+ ++  +   + +   ++R+ A+IGI L+P DG +  +L+  A+  M  AK + RN Y F+
Sbjct:  338 IARLGGDEFVLL-IEAREPADAATLAEKLVKRISQPYQISRHEVRISASIGIALYPGDGQTRHELMINADAAMYHAKDQGRNGYCFF 423
The following BLAST results are available for this feature:
BLAST of EY720423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y091_CAUCR5.728e-1137.93Uncharacterized signaling protein CC_0091 OS=Caulo... [more]
Y1727_PSEAE7.481e-1135.63Uncharacterized signaling protein PA1727 OS=Pseudo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-C08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720423 ID=EY720423; Name=EY720423; organism=Citrus sinensis; type=EST; length=276bp
CTGGCGATATAGAACTGGTAGCGGTTGCGCGAACGGCTCTTGGCCAGGGT
CATGGTCTGTTCGGCTTTTTGCAGCAGCTTCTCGGTGCTGTCGCCGTCTT
CCGGGAACAGGGTGATGCCGATGGTGGCACGCAGGCGGATCTGTTCGTGG
TCGAGGGCGAATTCGGCCTCCAGGTCATCGAGGATGCTTTGCGCCAGCTC
GGCGGCTTCGTAGGGTTGCTCGATATCGGCCTGCACCAGGGCGAACTGGT
CGCCACCCAGGCGGGCGAGGGCGCCG
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