EY720403

Overview
NameEY720403
Unique NameEY720403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_CYAA5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) GN=ispH PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.022e-56
Identity = 103/154 (66.88%), Postives = 122/154 (79.22%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDACI 471
            IVDTTCPWVSKVW +VEKHKK DYTSIIHGKY HEETVAT+SFAG Y+++ N+KEA+YVCDYIL G        K+ FLEKFK A SEG DPD DL+ +GIAN  TMLK ETE++GKL E TM+++ G   +NEHF+SF TICDAT +RQDA +
Sbjct:  152 IVDTTCPWVSKVWNSVEKHKKKDYTSIIHGKYKHEETVATSSFAGTYLVVLNLKEAQYVCDYILNG------GNKDEFLEKFKNAHSEGFDPDKDLIRLGIANQTTMLKSETEQIGKLFETTMLKKYGPTELNEHFMSFNTICDATQERQDAML 299          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.808e-55
Identity = 103/155 (66.45%), Postives = 122/155 (78.71%), Query Frame = 1
Query:    7 QIVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDACI 471
            +IVDTTCPWVSKVW TVEKHKKGD+TSIIHGKY HEET+AT+SFAGKY+I+ N+KEA+YV DYIL G        +E FL+KF KA S G DPD DL  VGIAN  TMLKGETE++GKL E TM+++ G   +N+HF SF TICDAT +RQDA +
Sbjct:  151 KIVDTTCPWVSKVWNTVEKHKKGDHTSIIHGKYKHEETIATSSFAGKYLIVLNLKEAQYVADYILHGR------NREEFLQKFAKACSAGFDPDKDLERVGIANQTTMLKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAML 299          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.586e-55
Identity = 103/155 (66.45%), Postives = 122/155 (78.71%), Query Frame = 1
Query:    7 QIVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDACI 471
            +IVDTTCPWVSKVW TVEKHKKGD+TSIIHGKY HEET+AT+SFAGKY+I+ N+KEA+YV DYIL G        +E FL+KF KA S G DPD DL  VGIAN  TMLKGETE++GKL E TM+++ G   +N+HF SF TICDAT +RQDA +
Sbjct:  151 KIVDTTCPWVSKVWNTVEKHKKGDHTSIIHGKYKHEETIATSSFAGKYLIVLNLKEAQYVADYILHG------GNREEFLQKFAKACSAGFDPDRDLERVGIANQTTMLKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAML 299          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7424) GN=ispH PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.422e-54
Identity = 100/160 (62.50%), Postives = 124/160 (77.50%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDACIGWLRNR 489
            IVDTTCPWV+KVW +VEKHKK +YTSIIHGKY HEETVAT+SFAG Y+++ NM++A+YVC+YIL G        K+ FL KFKKA SEG DPD DL  VGIAN  TMLK ETEE+GKL E TM+++ G  ++N HF+SF TICDAT +RQDA +  ++ +
Sbjct:  152 IVDTTCPWVAKVWNSVEKHKKRNYTSIIHGKYKHEETVATSSFAGTYLVVLNMEQAKYVCNYILNG------GDKQEFLAKFKKAYSEGFDPDTDLERVGIANQTTMLKSETEEIGKLFEHTMLKKYGPLDLNNHFMSFNTICDATQERQDAMLDLVKEK 305          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.387e-54
Identity = 98/153 (64.05%), Postives = 121/153 (79.08%), Query Frame = 1
Query:    7 QIVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            +I+DTTCPWVSKVW +VEKHKKG YTSIIHGKY HEET+AT+S+A  Y+I+ ++KEAEYVC+YIL G        +E FL KF+ A S   DPD DLV VGIAN  TMLKGETE++GKL E+T+MR+ G + +N+HF+SF TICDAT +RQDA
Sbjct:  152 KIMDTTCPWVSKVWNSVEKHKKGSYTSIIHGKYQHEETIATSSYAATYLIVLDLKEAEYVCNYILNG------GDREEFLHKFRHAYSPDFDPDRDLVRVGIANQTTMLKGETEQIGKLFERTLMRKYGPDQINQHFLSFNTICDATQERQDA 298          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_THEEB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispH PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.095e-53
Identity = 100/158 (63.29%), Postives = 124/158 (78.48%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDACIGWLR 483
            IVDTTCPWVSKVW +VEKHKK  +TSIIHGKY+HEET+AT+SFAG Y+I+ N++EA YVCDYIL G        + AF+ KF KA S G DPD DLV VGIAN  TMLKGETE++GKL E+TM+++ G + +NEHF+SF TICDAT +RQDA +  ++
Sbjct:  152 IVDTTCPWVSKVWHSVEKHKKVSFTSIIHGKYNHEETIATSSFAGTYLIVLNLEEARYVCDYILHG------GDRAAFMAKFAKACSPGFDPDRDLVRVGIANQTTMLKGETEQIGKLFERTMIQKYGPDRLNEHFMSFNTICDATQERQDAMLSLVK 303          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP8 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 8801) GN=ispH PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.440e-53
Identity = 100/160 (62.50%), Postives = 122/160 (76.25%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDACIGWLRNR 489
            IVDTTCPWVSKVW +VEKHKK  YTSIIHGKY HEETVAT+SFAG Y+++ N+++A YVCDYIL G        KE FL KFK A SEG DPD DL +VGIAN  TMLK ETE++GKL E TM+++ G   +N+HF+SF TICDAT +RQDA +  ++ +
Sbjct:  152 IVDTTCPWVSKVWNSVEKHKKRHYTSIIHGKYRHEETVATSSFAGTYLVVLNLEQATYVCDYILKG------GNKEEFLAKFKNAYSEGFDPDTDLEKVGIANQTTMLKSETEQIGKLFEGTMLKKYGPAVINDHFMSFNTICDATQERQDAMLELVKEK 305          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_ACAM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=ispH PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.440e-53
Identity = 101/154 (65.58%), Postives = 120/154 (77.92%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILG-GELNGSSSTKEA-FLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            I+DTTCPWVSKVWT+VEKHKKG YTSIIHGKY HEET+AT+SFAG Y++L N++EAEYV DYIL  G+       + A F+ KF  A S G DP+ DL  VGIAN  TMLKGETE++GKL E+T+MR+ G   VNEHF+SF TICDAT +RQDA
Sbjct:  153 IMDTTCPWVSKVWTSVEKHKKGSYTSIIHGKYKHEETIATSSFAGTYLVLLNLEEAEYVADYILNPGDTPSEREQRRADFMAKFANAHSPGFDPETDLERVGIANQTTMLKGETEQIGKLFERTVMRKYGPAQVNEHFLSFNTICDATQERQDA 306          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP2 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ispH PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.436e-53
Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            IVDTTCPWVSKVW +VEKHKK +YTSIIHGKY HEETVAT+SFAG Y++L N++EAEYV +YIL G        ++ FL+KFK A SEG DPD DL  VG+AN  TMLK ETE+MGKL E+TM+ + G   +N+HF+SF TICDAT +RQDA
Sbjct:  152 IVDTTCPWVSKVWNSVEKHKKKNYTSIIHGKYKHEETVATSSFAGTYLVLLNLEEAEYVRNYILHG------GDRQTFLDKFKNAYSEGFDPDKDLDRVGVANQTTMLKSETEQMGKLFEQTMLEKFGPTEINDHFMSFNTICDATQERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_TRIEI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=ispH PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.211e-52
Identity = 98/158 (62.03%), Postives = 122/158 (77.22%), Query Frame = 1
Query:    1 NVQIVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDACIG 474
            N QIVDTTCPWVSKVW ++EKHKK  +TSIIHGKYSH ET+AT+SFA KY+I+ NM +A+YVC+YIL G        ++ FL KFK+A SEG DPD+DL +VGIAN  TMLK ETEE+GKL E+TMM++   + +N H+ +F TICDAT +RQDA  G
Sbjct:  149 NCQIVDTTCPWVSKVWNSIEKHKKKKFTSIIHGKYSHAETIATSSFADKYLIVLNMTQAQYVCNYILNG------GNRDEFLAKFKQAYSEGFDPDLDLEQVGIANQTTMLKTETEEIGKLFERTMMKKYRPDQLNAHYQNFNTICDATQERQDAIAG 300          
The following BLAST results are available for this feature:
BLAST of EY720403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ISPH_CYAA54.022e-5666.884-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ANAVT5.808e-5566.454-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ANASP7.586e-5566.454-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_CYAP76.422e-5462.504-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_CYAP48.387e-5464.054-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_THEEB1.095e-5363.294-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_CYAP82.440e-5362.504-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ACAM12.440e-5365.584-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNP25.436e-5365.134-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_TRIEI1.211e-5262.034-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-008-H12-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720403 ID=EY720403; Name=EY720403; organism=Citrus sinensis; type=EST; length=845bp
AATGTACAGATTGTTGATACAACTTGCCCTTGGGTGTCTAAGGTCTGGAC
TACTGTGGAGAAGCACAAGAAGGGAGACTACACTTCAATTATTCACGGTA
AATATTCTCATGAGGAAACTGTAGCAACTGCATCGTTTGCAGGAAAGTAT
ATCATACTCAAGAATATGAAAGAGGCTGAGTATGTGTGTGATTACATTCT
TGGGGGTGAACTTAATGGATCTAGCTCAACAAAAGAAGCATTCCTTGAGA
AATTCAAGAAAGCTGTTTCAGAAGGGTGTGATCCAGATGTTGACCTGGTA
GAAGTGGGCATTGCAAACCACCCTACAATGCTCAAGGGTGAGACAGAAGA
GATGGGAAAACTACTCGAGAAGACCATGATGCGTAGATTGGGAGTTGAAA
ATGTCAATGAACACTTCATAAGCTTCACCACCATTTGTGATGCTACTCAC
GACCGACAGGATGCATGTATAGGATGGTTGAGGAACAGGTCGATCCCCTC
CCGGTGGTCGGCTGCGTGGACCGCGACCGATAGGGGACGGCCTCGGGAGA
TGGGGGAAAGCGGCGGGTGGCCGCACGCGGGATGTCCCCTCCCACGAGGG
GGCGCCGCGGGAGCCGCGCCGCGGGCGGGGCGGGCCGCCCAGCGCGGGGG
CGAAGGCGCGCAGCGCGCCACGCCCGCCCCCCGCCCCCCCCCCGGCCCAG
CCGCGCCGGCGGGGGGCGGCGAGGGGGCGGCCGGGACGGGCGGGAGGCGG
GGCCCGGGGCTGGCGGCCCGGGGCCGGGCCCAGCCGGGCCGGCGGCGCCG
GGGCCGGGCGGGCTCGGGGGAGGGCGGCGGGTGGGCGAGGCGCGC
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