EY735994

Overview
NameEY735994
Unique NameEY735994
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13137 contig Csv1_Contig13137:371..1041. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735994 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.169e-23
Identity = 59/89 (66.29%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    8 SAGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 274
            S GINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   76 STGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164          
BLAST of EY735994 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.169e-23
Identity = 59/89 (66.29%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    8 SAGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 274
            S GINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   77 STGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of EY735994 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.169e-23
Identity = 59/89 (66.29%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    8 SAGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 274
            S GINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   77 STGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of EY735994 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.169e-23
Identity = 59/89 (66.29%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    8 SAGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 274
            S GINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   77 STGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of EY735994 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22
Identity = 58/89 (65.17%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    8 SAGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 274
            S GINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:   77 STGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of EY735994 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22
Identity = 58/89 (65.17%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    8 SAGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 274
            S GINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:   78 STGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166          
BLAST of EY735994 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22
Identity = 58/89 (65.17%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    8 SAGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 274
            S GINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:   77 STGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of EY735994 vs. ExPASy Swiss-Prot
Match: VATL1_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c1/c3/c5 OS=Arabidopsis thaliana GN=VHA-C1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.504e-22
Identity = 58/89 (65.17%), Postives = 59/89 (66.29%), Query Frame = 2
Query:    8 SAGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 274
            S GINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:   76 STGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164          
BLAST of EY735994 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22
Identity = 58/89 (65.17%), Postives = 58/89 (65.17%), Query Frame = 2
Query:    8 SAGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 274
            S GINPKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   77 STGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of EY735994 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22
Identity = 58/89 (65.17%), Postives = 58/89 (65.17%), Query Frame = 2
Query:    8 SAGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 274
            S GINPKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:   77 STGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
The following BLAST results are available for this feature:
BLAST of EY735994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
VATL_PHAAU5.169e-2366.29V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_MESCR5.169e-2366.29V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_KALDA5.169e-2366.29V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU5.169e-2366.29V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_GOSHI1.504e-2265.17V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL4_ARATH1.504e-2265.17V-type proton ATPase 16 kDa proteolipid subunit c4... [more]
VATL2_ARATH1.504e-2265.17V-type proton ATPase 16 kDa proteolipid subunit c2... [more]
VATL1_ARATH1.504e-2265.17V-type proton ATPase 16 kDa proteolipid subunit c1... [more]
VATL_ORYSJ1.964e-2265.17V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSI1.964e-2265.17V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-008-F10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735994 ID=EY735994; Name=EY735994; organism=Citrus sinensis; type=EST; length=672bp
CCACGCGTCCGCCGGAATTAACCCTAAGGCCAAATCTTATTACCTTTTCG
ATGGCTACGCGCATCTCTCTTCTGGCCTCGCTTGTGGCCTTGCTGGTCTC
TCCGCTGGTATGGCAATTGGGATCGTCGGTGATGCTGGTGTCAGAGCCAA
TGCTCAACAGCCGAAGCTTTTCGTTGGGATGATCCTCATTCTGATCTTTG
CTGAAGCGCTGGCACTTTATGGACTTATTGTTGGTATCATTCTTTCTTCT
CGTGCTGGTCAGTCAAGAGCAGACTAGAAGAGGATGCTTTGCTTGGTGGT
TATTTGGCCTGTTGTGTTCCATTAAGAAGAATTCAGTTCATATTGCCTGT
GACGGGAGGTGGTAGTCTGCGTTGGGTAGTGTTTTTCTTTTTCGACTTAA
AAGTTATTGTCTGTGGTGTGATTGTTCAACCAGATTGATTCGATTTTTAA
TGGTGATGGAGAATGTAGAATTAGGAATTAGCTTCTCCCATTAATAAAAT
CATGCTGTCATTGTTTAGTTTAATGTTAAAATGCTGTATTTTTTGGGATC
CATTTATAGGTTGTTGATACCCTAATAATCGCTTGTAATGTGTTCTGAGA
CTCTCTCTACTTGATCTCCAGTTTTGTAAAGCCAAAATTGTGTTGTGCGT
CAAAAAAAAAAAAAAAAAAAAA
back to top