DR908588

Overview
NameDR908588
Unique NameDR908588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR908588_ssr321 microsatellite DR908588_ssr321:321..330. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5659 contig Csv1_Contig5659:537..1148. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.681e-31
Identity = 60/76 (78.95%), Postives = 72/76 (94.74%), Query Frame = 2
Query:    2 SPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDE 229
            +P+GFDVK NN+K+KL GEK+GRKG L+VATE+F+VAPSLYMVE+RKSGGDTLEFHKFYKNL+TGLKD+VWK+ DE
Sbjct:  382 APMGFDVKTNNYKMKLTGEKSGRKGQLAVATEVFQVAPSLYMVEMRKSGGDTLEFHKFYKNLTTGLKDIVWKTIDE 457          
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPK9_ORYSJ (CBL-interacting protein kinase 9 OS=Oryza sativa subsp. japonica GN=CIPK9 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.310e-27
Identity = 55/72 (76.39%), Postives = 67/72 (93.06%), Query Frame = 2
Query:    5 PLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 220
            PLGF+V+K N+K+KL+G+KTGRKG+LSVATE+FEVAPSL+MVELRK+GGDTLEFH FY N S+ LKD+VWKS
Sbjct:  375 PLGFNVRKQNYKMKLKGDKTGRKGYLSVATEVFEVAPSLHMVELRKTGGDTLEFHNFYNNFSSELKDIVWKS 446          
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.310e-27
Identity = 54/72 (75.00%), Postives = 69/72 (95.83%), Query Frame = 2
Query:    5 PLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 220
            PLGF+V+K+N+K+K++G+K+GRKG LSVATE+FEVAPSL++VELRK+GGDTLEFHKFYKN S+GLKDVVW +
Sbjct:  367 PLGFNVRKDNYKIKMKGDKSGRKGQLSVATEVFEVAPSLHVVELRKTGGDTLEFHKFYKNFSSGLKDVVWNT 438          
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.977e-27
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 2
Query:    5 PLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWK------SGDE 229
            P+GF+V+K N+KLKLQGE  GRKG L++ATE+FEV PSLYMVELRKS GDTLEFHKFY N+S GLKDV+WK      +GDE
Sbjct:  363 PMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHKFYHNISNGLKDVMWKPESSIIAGDE 443          
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.601e-25
Identity = 55/74 (74.32%), Postives = 65/74 (87.84%), Query Frame = 2
Query:    5 PLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 226
            PLGFDV+K N+KL+L+  K GRKG+L+VATEI +VAPSL+MVE+RK+ GDTLEFHKFYKNLS  LKDVVWKS D
Sbjct:  359 PLGFDVQKKNYKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDD 432          
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPKQ_ARATH (CBL-interacting serine/threonine-protein kinase 26 OS=Arabidopsis thaliana GN=CIPK26 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 7.945e-25
Identity = 50/76 (65.79%), Postives = 65/76 (85.53%), Query Frame = 2
Query:    5 PLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDET 232
            PLGFD++K N+K++L+    GRKG+L VATEIF+V+PSL+M+E+RK+ GDTLEFHKFYK LST L DVVWKSG+ +
Sbjct:  360 PLGFDIQKKNYKMRLENVTAGRKGNLRVATEIFQVSPSLHMIEVRKTKGDTLEFHKFYKKLSTSLNDVVWKSGESS 435          
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.360e-23
Identity = 48/75 (64.00%), Postives = 64/75 (85.33%), Query Frame = 2
Query:    5 PLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDE 229
            PLGFD++K N+K++++  K GRKG+L+VATE+F+VAPSL++VEL+K+ GDTLEF KFY+ LST LKDVVWK   E
Sbjct:  367 PLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGE 441          
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.712e-23
Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 2
Query:    5 PLGFDVKKNN----------------FKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 226
            PLGFDV+K N                FKL+L+  K GRKG+L+VATEI +VAPSL+MVE+RK+ GDTLEFHKFYKNLS  LKDVVWKS D
Sbjct:  359 PLGFDVQKKNYKICSPCLTTICMNIPFKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDD 448          
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPK3_ARATH (CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.268e-22
Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 2
Query:    5 PLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 226
            PLGFDV+K N+K++L+  K GRKG+L+VATEIF+VAPSL+MV++ KS GDTLEFHKFYK LS  L+ VVW + +
Sbjct:  361 PLGFDVQKKNYKMRLENVKAGRKGNLNVATEIFQVAPSLHMVQVSKSKGDTLEFHKFYKKLSNSLEQVVWTNNE 434          
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPK3_ORYSJ (CBL-interacting protein kinase 3 OS=Oryza sativa subsp. japonica GN=CIPK3 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.392e-21
Identity = 44/73 (60.27%), Postives = 63/73 (86.30%), Query Frame = 2
Query:    8 LGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 226
            LGF+++K N++++++  K GRKGHL++ATE+F+VAPSL++VEL+K+ GDTLEF KFY+ LST LKDVVW+  D
Sbjct:  367 LGFNIQKRNYRMRMENIKEGRKGHLNIATEVFQVAPSLHVVELKKAKGDTLEFQKFYQTLSTQLKDVVWELED 439          
The following BLAST results are available for this feature:
BLAST of DR908588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CIPKN_ARATH5.681e-3178.95CBL-interacting serine/threonine-protein kinase 23... [more]
CIPK9_ORYSJ1.310e-2776.39CBL-interacting protein kinase 9 OS=Oryza sativa s... [more]
CIPK9_ARATH1.310e-2775.00CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPKN_ORYSJ4.977e-2770.37CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]
CIPKW_ORYSJ1.601e-2574.32CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
CIPKQ_ARATH7.945e-2565.79CBL-interacting serine/threonine-protein kinase 26... [more]
CIPKV_ORYSJ4.360e-2364.00CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]
CIPKX_ORYSJ9.712e-2362.22CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]
CIPK3_ARATH1.268e-2264.86CBL-interacting serine/threonine-protein kinase 3 ... [more]
CIPK3_ORYSJ2.392e-2160.27CBL-interacting protein kinase 3 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16716 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-39_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908588 ID=DR908588; Name=DR908588; organism=Citrus sinensis; type=EST; length=612bp
ATCGCCTTTGGGTTTTGATGTGAAGAAAAATAATTTCAAGTTGAAGCTTC
AAGGGGAAAAAACTGGACGCAAGGGTCATTTATCTGTTGCAACAGAGATT
TTTGAGGTGGCCCCTTCACTTTACATGGTTGAGCTTCGAAAATCTGGAGG
AGATACCTTAGAATTTCACAAGTTTTACAAAAACCTTTCGACTGGGCTGA
AAGATGTTGTTTGGAAATCAGGAGATGAAACAATTGTTGAAGGATCTGCA
GTCGCTGGTGGCGCAGGGTCTCAATAGCGGATTTCCTTTCATGACTTGCA
CTGCTGAATATCTCCAGCAAATATATATATTGCTTTTGCACCATTGTATC
TCAGCTTTGTATTTTATCCTCTAGGCCATGTGTTTCCTTCATTTGTGATT
CAGAACTCACTTCTCGTGTACCTTGGTTTGGCTTTTGTGTGGTTTCAGAC
TTCCAGTTGTATCATCTCAACGGATATTGAACGTAGTCAATTACCTGCAA
ATAATCAAAAAGACTCTCAGTCCACTGTCATTTTCATTTTGTTTGTTTTT
AGTGACTTGTCTATGGACCAGAAAATTCAATAAAAATAATATATTGTAAA
AAAAAAAAAAAA
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