EY680404

Overview
NameEY680404
Unique NameEY680404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680404 vs. ExPASy Swiss-Prot
Match: AIG2_ARATH (Protein AIG2 OS=Arabidopsis thaliana GN=AIG2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.247e-29
Identity = 63/154 (40.91%), Postives = 92/154 (59.74%), Query Frame = 3
Query:   75 FVYGSLLADDVVRVLLKRIPQSSSAILPGYRRFSIKGRVYPAILPVENKHVTGRVLFGISDPXXXXXXXXXXXXYQRTTADVSLVDTADKLQVQTYVWTNKNDPNLYGDWDFEEWRRLHMKDFVKMTAGFVEELELPEAKPRVAAYESFYQQNA 536
            FVYGS     VV ++L+  P   SA L GY  + +KGR++P I P +N  + G++L G++D             Y R T +V L DT +K QV+T VW NK+DPN+YG+WDFEEW+RLHM+ F++    F+E  + P  + R   +E F Q ++
Sbjct:   13 FVYGSFQEPAVVNLILECAPVMVSAQLHGYHLYRLKGRLHPCISPSDNGLINGKILTGLTDSQLESLDMIEGTEYVRKTVEVVLTDTLEKKQVETIVWANKDDPNMYGEWDFEEWKRLHMEKFIEAATKFMEWKKNPNGRSR-EEFEKFVQDDS 165          
BLAST of EY680404 vs. ExPASy Swiss-Prot
Match: AIG2L_ARATH (AIG2-like protein OS=Arabidopsis thaliana GN=At5g39720 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.739e-29
Identity = 57/140 (40.71%), Postives = 87/140 (62.14%), Query Frame = 3
Query:   75 FVYGSLLADDVVRVLLKRIPQSSSAILPGYRRFSIKGRVYPAILPVENKHVTGRVLFGISDPXXXXXXXXXXXXYQRTTADVSLVDTADKLQVQTYVWTNKNDPNLYGDWDFEEWRRLHMKDFVKMTAGFVEELELPEAK 494
            FVYGS    DV+ V+L R P+  SA LPG++RF +KGR+YP I+P E   V G+VL G++              Y+R T  +   D ++K+ V+TY+W NK DP+++G+W+FEEW+RLH K F++     +E  + P+ +
Sbjct:   13 FVYGSFQDPDVINVMLDRTPEIVSATLPGFQRFRLKGRLYPCIVPSEKGEVHGKVLMGVTSDELENLDAVEGNEYERVTVGIVREDNSEKMAVKTYMWINKADPDMFGEWNFEEWKRLHKKKFIETFKKIMECKKKPQGQ 152          
The following BLAST results are available for this feature:
BLAST of EY680404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AIG2_ARATH1.247e-2940.91Protein AIG2 OS=Arabidopsis thaliana GN=AIG2 PE=2 ... [more]
AIG2L_ARATH4.739e-2940.71AIG2-like protein OS=Arabidopsis thaliana GN=At5g3... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-G01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680404 ID=EY680404; Name=EY680404; organism=Citrus sinensis; type=EST; length=665bp
CCACGCGTCCGGAAATGGGTTCGGCTTCGGCTTCCGCAGCGAACGTTGTT
AATCACAACCACAAGCACAACGTGTTTGTGTATGGCAGTCTGTTAGCAGA
CGACGTCGTCCGCGTCCTTCTAAAGCGCATCCCTCAATCTTCTTCCGCCA
TCCTCCCGGGCTATCGCAGGTTTAGCATCAAAGGCCGTGTCTATCCAGCC
ATCCTACCCGTTGAGAACAAACATGTTACCGGCAGGGTGCTGTTTGGAAT
CTCTGATCCTGAATTGCTTGTTCTAGATGAATTTGAAGATTTTGAGTATC
AAAGGACCACTGCTGATGTCTCTCTCGTGGATACTGCTGACAAGTTACAA
GTTCAGACTTACGTCTGGACCAATAAAAATGATCCCAACCTGTATGGAGA
TTGGGATTTCGAGGAATGGAGACGCCTACACATGAAAGATTTTGTCAAGA
TGACCGCAGGATTTGTTGAAGAACTGGAGCTGCCTGAAGCAAAGCCAAGG
GTAGCTGCATATGAGTCCTTTTATCAACAGAATGCTGACAATTCAGAAAT
GTCTTAATGATTAATCTGTTAGTTTCAATATGCATTTATGTATGTATGTT
ATGGACTATCTTCTTTCAAAAATAATGTCATCCCTCCAGCAGTTCTTTTG
TAAAAAAAAAAAAAA
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