DR908567

Overview
NameDR908567
Unique NameDR908567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908567 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.513e-42
Identity = 84/111 (75.68%), Postives = 102/111 (91.89%), Query Frame = 1
Query:    1 GVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSE-NQPSSED--KLKDSNTQ 324
            GVL+LEMLTGK+P+Q+P  +D+VDLPRWVQSVVREEWTSEVFD+ELMR++NIEEEMVQMLQIAM+CVA+VP++RPTM++VVRMIE+IR SDSE  +PSS+D  K KDSN Q
Sbjct:  543 GVLILEMLTGKSPVQSPSRDDMVDLPRWVQSVVREEWTSEVFDIELMRFQNIEEEMVQMLQIAMACVAQVPEVRPTMDDVVRMIEEIRVSDSETTRPSSDDNSKPKDSNVQ 653          
BLAST of DR908567 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.998e-35
Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 1
Query:    1 GVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSEN---QPSSEDKLKDSNTQTP 330
            GVLLLE+LTGK+P QA   E+ +DLPRWV SVVREEWT+EVFDVELMRY NIEEEMVQ+LQIAM+CV+ VPD RP M+EV+RMIED+  S++ +   + SS+D  K S  QTP
Sbjct:  533 GVLLLELLTGKSPNQASLGEEGIDLPRWVLSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVSTVPDQRPVMQEVLRMIEDVNRSETTDDGLRQSSDDPSKGSEGQTP 645          
BLAST of DR908567 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.217e-34
Identity = 74/112 (66.07%), Postives = 92/112 (82.14%), Query Frame = 1
Query:    1 GVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE-NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPS----DSENQPSSEDKLKDSNT 321
            GVLLLEMLTGKA  +  GHE+VVDLP+WVQSVVREEWT EVFDVEL++ + N+EEEMVQMLQIAM+CV+K PD RP+MEEVV M+E+IRPS     S N+ SS + ++ S++
Sbjct:  527 GVLLLEMLTGKAAGKTTGHEEVVDLPKWVQSVVREEWTGEVFDVELIKQQHNVEEEMVQMLQIAMACVSKHPDSRPSMEEVVNMMEEIRPSGSGPGSGNRASSPEMIRSSDS 638          
BLAST of DR908567 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.778e-32
Identity = 66/98 (67.35%), Postives = 82/98 (83.67%), Query Frame = 1
Query:    1 GVLLLEMLTGKAPIQAPGHED---VVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSENQ 285
            GV++LEMLTGK P+  PG ED   V+DLPRWV+SVVREEWT+EVFDVEL++++NIEEEMVQMLQ+A++CVA+ P+ RP MEEV RMIED+R  D   Q
Sbjct:  527 GVVILEMLTGKTPLTQPGLEDERVVIDLPRWVRSVVREEWTAEVFDVELLKFQNIEEEMVQMLQLALACVARNPESRPKMEEVARMIEDVRRLDQSQQ 624          
BLAST of DR908567 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.409e-29
Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 1
Query:    1 GVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSENQPSSEDKLKDSN----TQTP 330
            GV+LLE+LTGK+PI     ++++ L RWV SVVREEWT+EVFD+EL+RY NIEEEMV+MLQIAMSCV K  D RP M ++VR+IE++    +  +P  E K K  N    T TP
Sbjct:  522 GVVLLELLTGKSPIHTTAGDEIIHLVRWVHSVVREEWTAEVFDIELLRYTNIEEEMVEMLQIAMSCVVKAADQRPKMSDLVRLIENVGNRRTSIEPEPELKPKSENGASETSTP 635          
BLAST of DR908567 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.277e-22
Identity = 56/110 (50.91%), Postives = 73/110 (66.36%), Query Frame = 1
Query:    1 GVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSENQPSSEDKLKDSNTQTP 330
            G+L+ E+LTGK+        +V +L RWV SVVREEWT EVFD EL+R   +EEEMV+MLQ+ M C A++P+ RP M EVVRM+E+IRP    +   SE  +    T TP
Sbjct:  491 GILIFEVLTGKS--------EVANLVRWVNSVVREEWTGEVFDEELLRCTQVEEEMVEMLQVGMVCTARLPEKRPNMIEVVRMVEEIRPEKLASGYRSE--VSTGATTTP 590          
BLAST of DR908567 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.337e-22
Identity = 50/101 (49.50%), Postives = 71/101 (70.30%), Query Frame = 1
Query:    1 GVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYENIEEEMV-QMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSENQPSSED 300
            GV+LLE++TGKAP  +  +E+ VDLPRWV+SV R+EW  EVFD EL+     EEEM+ +M+Q+ + C ++ PD RP M EVVR +E++RP    +Q +  D
Sbjct:  555 GVVLLELITGKAPSNSVMNEEGVDLPRWVKSVARDEWRREVFDSELLSLATDEEEMMAEMVQLGLECTSQHPDQRPEMSEVVRKMENLRPYSGSDQVNEAD 655          
BLAST of DR908567 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.412e-21
Identity = 51/96 (53.12%), Postives = 69/96 (71.88%), Query Frame = 1
Query:    1 GVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE---NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSE 279
            GV+LLE+LTGKAP  +  +E+ +DL RWV SV REEW +EVFD ELM  E   ++EEEM +MLQ+ + C  + PD RP M EVVR I+++R S ++
Sbjct:  549 GVVLLELLTGKAPSNSVMNEEGMDLARWVHSVAREEWRNEVFDSELMSIETVVSVEEEMAEMLQLGIDCTEQHPDKRPVMVEVVRRIQELRQSGAD 644          
BLAST of DR908567 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.561e-20
Identity = 48/100 (48.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query:    1 GVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE-NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSENQPSSE 297
            GVL+LE+LTGK+P     HE+ VDLPRWV S+  ++  S+VFD EL RY+ +  E M+++L I +SC  + PD RPTM EV R+IE++  S +   P S+
Sbjct:  526 GVLILELLTGKSPTHQQLHEEGVDLPRWVSSITEQQSPSDVFDPELTRYQSDSNENMIRLLNIGISCTTQYPDSRPTMPEVTRLIEEVSRSPASPGPLSD 625          
BLAST of DR908567 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.747e-20
Identity = 48/100 (48.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query:    1 GVLLLEMLTGKAPIQAPGHEDVVDLPRWVQSVVREEWTSEVFDVELMRYE-NIEEEMVQMLQIAMSCVAKVPDMRPTMEEVVRMIEDIRPSDSENQPSSE 297
            GVL+LE+LTGK+P     +E+ VDLPRWVQSV  ++  S+V D EL RY+    E ++++L+I MSC A+ PD RP+M EV R+IE++  S     P S+
Sbjct:  528 GVLILELLTGKSPTHQQLNEEGVDLPRWVQSVTEQQTPSDVLDPELTRYQPEGNENIIRLLKIGMSCTAQFPDSRPSMAEVTRLIEEVSHSSGSPNPVSD 627          
The following BLAST results are available for this feature:
BLAST of DR908567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
Y5830_ARATH5.513e-4275.68Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y2267_ARATH4.998e-3566.37Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y3868_ARATH7.217e-3466.07Probable inactive receptor kinase At3g08680 OS=Ara... [more]
Y5516_ARATH1.778e-3267.35Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
Y4374_ARATH1.409e-2956.14Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y5332_ARATH1.277e-2250.91Probable inactive receptor kinase At5g53320 OS=Ara... [more]
Y1848_ARATH6.337e-2249.50Probable inactive receptor kinase At1g48480 OS=Ara... [more]
RLK90_ARATH1.412e-2153.13Probable inactive receptor kinase RLK902 OS=Arabid... [more]
Y5659_ARATH1.561e-2048.00Probable inactive receptor kinase At5g16590 OS=Ara... [more]
Y3288_ARATH7.747e-2048.00Probable inactive receptor kinase At3g02880 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16695 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-41_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908567 ID=DR908567; Name=DR908567; organism=Citrus sinensis; type=EST; length=616bp
GGTGTTCTTCTCCTAGAAATGCTGACTGGCAAAGCACCAATCCAAGCACC
AGGGCATGAGGACGTGGTCGACCTTCCAAGATGGGTTCAGTCGGTTGTCC
GAGAGGAATGGACTTCTGAGGTGTTTGATGTAGAACTAATGAGATATGAG
AATATTGAAGAGGAGATGGTGCAAATGCTTCAGATAGCAATGTCCTGTGT
AGCAAAAGTGCCAGACATGAGACCTACAATGGAAGAAGTCGTTAGGATGA
TCGAGGACATTCGACCATCTGATTCAGAAAACCAGCCATCATCAGAGGAC
AAGTTAAAGGATTCAAATACTCAAACCCCATAACTATTAAGCCATGCTCT
TCCTATGTATTAAGTTCTATGTTACAGTTATCTTTGTTCCAGTTCGAGAA
TGAATTTATCTGACAGGGACACTGCACCAGCCTTTTCTGCATGTAAGTAG
TTTCTACTAGTCAATGTGTGATTCTTTCAGGGTATTTGTGTAACAAAATT
CCCGGAGTAGCATTTGATTTCCTCTGGTTATTTGTGATTATTGGTGATAA
TTGTAATGAAGTTATTTCAGAATAATTATATGTGATTTCCTGTATGGCTA
TTTCACTTTAAAAAAA
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