DR908562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908562 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.778e-32 Identity = 68/157 (43.31%), Postives = 102/157 (64.97%), Query Frame = 2 Query: 2 STRVSNELGAGNPQAAQLAACVVMVLAVTEAVIVGTILFCCRYVLAYAFNSDKDVVNYVSELVPLLSFSIIMDSLQSVLSGVARGTGWQHIGAYVNLGAYYIVGIPLASVLCFVLNLRGKGLWIGIMTGSAVQAIVLAIITVTTNWRKQARMARERI 472 S RVSNELGAGNP+ A L+ VV + V + ++ I+ R L+ AF SD +V+ VS+L PLL+ SI ++ +Q +LSGVA G+GWQ + AYVNL YY++G+P+ VL F +L G+W G++ G +Q + L ++T+ TNW + A +R+ Sbjct: 336 SVRVSNELGAGNPRVAMLSVVVVNITTVLISSVLCVIVLVFRVGLSKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIGLPIGCVLGFKTSLGVAGIWWGMIAGVILQTLTLIVLTLKTNWTSEVENAAQRV 492
BLAST of DR908562 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.749e-25 Identity = 65/159 (40.88%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 2 STRVSNELGAGNPQAAQLAACVVMVLAVTEAVIVGTILFCCRYVLAYAFNSDKDVVNYVSELVPLLSFSIIMDSLQSVLSGVARGTGWQHIGAYVNLGAYYIVGIPLASVLCFVLNLRGKGLWIGIMTGSAVQAIVLAIITVTTNWRKQARMARERIFE 478 +TRV N +GAGN + A+LA V + L VI+ ILF R Y F SDKDVV V+ ++PL++ I D+ Q V G+ RG G Q IG VN AYY++G+P+A +LCF L+ GLWIGI + A V ++ NW +A + E Sbjct: 380 ATRVGNLIGAGNTKLAKLATHVSINLGAAIGVIIAVILFLTRNTWTYIFTSDKDVVALVATIIPLVALINIADNTQCVAGGLLRGQGRQRIGGVVNFIAYYLLGLPVAIILCFKLDWGLYGLWIGIGAAILIIAGVETWCSLHVNWDHLVELANRQFDE 538
BLAST of DR908562 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.969e-24 Identity = 54/154 (35.06%), Postives = 89/154 (57.79%), Query Frame = 2 Query: 2 STRVSNELGAGNPQAAQLAACVVMVLAVTEAVIVGTILFCCRYVLAYAFNSDKDVVNYVSELVPLLSFSIIMDSLQSVLSGVARGTGWQHIGAYVNLGAYYIVGIPLASVLCFVLNLRGKGLWIGIMTGSAVQAIVLAIITVTTNWRKQARMAR 463 S RV N LGAG+ + A+ ++ V +++ V AV +L C+ + Y F +D+D++N V+++VP+ + S + ++L GV RG+G Q +GA VN YY+VG+P+ L F L GLW GI+ + QA+ + NW+K + A+ Sbjct: 317 SVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATKLGVMGLWSGIIICTVFQAVCFLGFIIQLNWKKACQQAQ 470
BLAST of DR908562 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.969e-24 Identity = 54/154 (35.06%), Postives = 89/154 (57.79%), Query Frame = 2 Query: 2 STRVSNELGAGNPQAAQLAACVVMVLAVTEAVIVGTILFCCRYVLAYAFNSDKDVVNYVSELVPLLSFSIIMDSLQSVLSGVARGTGWQHIGAYVNLGAYYIVGIPLASVLCFVLNLRGKGLWIGIMTGSAVQAIVLAIITVTTNWRKQARMAR 463 S RV N LGAG+ + A+ ++ V +++ V AV +L C+ + Y F +D+D++N V+++VP+ + S + ++L GV RG+G Q +GA VN YY+VG+P+ L F L GLW GI+ + QA+ + NW+K + A+ Sbjct: 317 SVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATTLGVMGLWSGIIICTVFQAVCFLGFIIQLNWKKACQQAQ 470
BLAST of DR908562 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.843e-24 Identity = 58/171 (33.92%), Postives = 93/171 (54.39%), Query Frame = 2 Query: 2 STRVSNELGAGNPQAAQLAACVVMVLAVTEAVIVGTILFCCRYVLAYAFNSDKDVVNYVSELVPLLSFSIIMDSLQSVLSGVARGTGWQHIGAYVNLGAYYIVGIPLASVLCFVLNLRGKGLWIGIMTGSAVQAIVLAIITVTTNWRKQARMAR--ERIFEGTYSAGNRSV 508 + RV N LGAGN + A+ ++ V +++ AV+ +L C+ ++ Y F SD+D++ V+++ P+ + S + +SL G+ RG+G Q GA VN YY+VG+P+ L F L GLW+GI+ + QA+ NW K + AR + T S GN +V Sbjct: 316 NVRVGNALGAGNIEQAKKSSAVALLVTELIAVVFCVMLLSCKDLVGYIFTSDRDIIALVAQVTPIYAVSHLFESLAGTSGGILRGSGNQKFGAIVNAIGYYVVGLPIGIALMFAAKLGVIGLWLGIVVCAVSQAVCFLGFIARLNWTKACQQARVHANLTVNTASNGNSAV 486
BLAST of DR908562 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.573e-23 Identity = 59/156 (37.82%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 2 STRVSNELGAGNPQAAQLAACVVMVLAVTEAVIVGTILFCCRYVLAYAFNSDKDVVNYVSELVPLLSFSIIMDSLQSVLSGVARGTGWQHIGAYVNLGAYYIVGIPLASVLCFVLNLRGKGLWIGIMTGSAVQAIVLAIITVTTNWRKQARMARER 469 S RV N LGAGN A+ + V++ A A++VG +L + V+AY F +DKD+++ VS+++P+ + + D+L GV RGTG Q IGA +N YY G P+ L F L GLW G++ + QA I + TNW + A A+ R Sbjct: 326 SVRVGNALGAGNADQARCSCTTVLLCAGVCALLVGILLAALKDVVAYIFTNDKDIISLVSQVMPIFAPFHLFDALAGTCGGVLRGTGKQKIGAVLNTIGYYGFGFPIGVSLMFAAKLGIIGLWAGLIVCVSFQAFSYLIYILRTNWSRVAEQAQVR 481
BLAST of DR908562 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.732e-23 Identity = 53/153 (34.64%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 2 STRVSNELGAGNPQAAQLAACVVMVLAVTEAVIVGTILFCCRYVLAYAFNSDKDVVNYVSELVPLLSFSIIMDSLQSVLSGVARGTGWQHIGAYVNLGAYYIVGIPLASVLCFVLNLRGKGLWIGIMTGSAVQAIVLAIITVTTNWRKQARMA 460 S RV N LGAGN + A+L+A V +V V + +V T++ C + V+AY F +++++V+ VS+++ + F + D++ + G+ RG G Q +GA N+ YY VG P L F L++ GLWIG +Q++ I+ +W+K + A Sbjct: 335 SVRVGNALGAGNTERAKLSAKVALVCGVLVSCVVATLIGCTKDVIAYIFTTEEEIVSRVSQVMIMYGFFHLFDAIAGITGGIVRGAGKQLLGALCNIVGYYFVGFPTGVSLMFALSMGIIGLWIGFFGCVFLQSLFFIILIYKLDWKKATQEA 487
BLAST of DR908562 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.408e-21 Identity = 52/154 (33.77%), Postives = 84/154 (54.55%), Query Frame = 2 Query: 2 STRVSNELGAGNPQAAQLAACVVMVLAVTEAVIVGTILFCCRYVLAYAFNSDKDVVNYVSELVPLLSFSIIMDSLQSVLSGVARGTGWQHIGAYVNLGAYYIVGIPLASVLCFVLNLRGKGLWIGIMTGSAVQAIVLAIITVTTNWRKQARMAR 463 + RV N LGAGN A+ ++ + +++ AV +L C+ ++ Y F +D D+V V+++VP+ + S + ++L GV RGTG Q +GA VN YY++G+P+ L FV L GLW GI+ S Q + NW+ + A+ Sbjct: 316 NVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDWDIVALVAQVVPIYAVSHLFEALACTCGGVLRGTGNQKVGAIVNAIGYYVIGLPIGISLMFVAKLGVIGLWSGIIICSVCQTSCFLVFIARLNWKLACQQAQ 469
BLAST of DR908562 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 4.108e-21 Identity = 48/154 (31.17%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 2 STRVSNELGAGNPQAAQLAACVVMVLAVTEAVIVGTILFCCRYVLAYAFNSDKDVVNYVSELVPLLSFSIIMDSLQSVLSGVARGTGWQHIGAYVNLGAYYIVGIPLASVLCFVLNLRGKGLWIGIMTGSAVQAIVLAIITVTTNWRKQARMAR 463 + RV N LGAGN A+ ++ + +++ AV +L C+ ++ Y F +D+D+V V++++P+ + S + + L G+ RGTG Q +GA VN YY++G+P+ L F L GLW GI+ + Q NW++ + A+ Sbjct: 317 NVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDRDIVALVAQVIPIYAVSHLFEGLACTCGGILRGTGNQKVGAIVNAIGYYVIGLPIGIALMFAAKLGVIGLWSGIIICTTCQTTCFLAFIARLNWKRACQQAQ 470
BLAST of DR908562 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.007e-21 Identity = 53/153 (34.64%), Postives = 88/153 (57.52%), Query Frame = 2 Query: 8 RVSNELGAGNPQAAQLAACVVMVLAVTEAVIVGTILFCCRYVLAYAFNSDKDVVNYVSELVPLLSFSIIMDSLQSVLSGVARGTGWQHIGAYVNLGAYYIVGIPLASVLCFVLNLRGKGLWIGIMTGSAVQAIVLAIITVTTNWRKQARMARE 466 RV LGA + A+ +A ++ +++VGT+L L Y F SD++V+ V++++P+ +++++ V GV RGTG Q GA VN YYIVG+PL VL FV+ +R GLW+G++T + A+ + V +W+ A A++ Sbjct: 344 RVGTALGAADTLQAKRSAVSGLLCTAGTSLVVGTLLGLLNSQLGYIFTSDEEVIALVNQVLPIYIVFQLVEAVCCVFGGVLRGTGKQAFGAIVNAIMYYIVGLPLGIVLTFVVGMRIMGLWLGMLTCIFLAAVTFVVYAVQLDWKLAAEEAQK 496 The following BLAST results are available for this feature:
BLAST of DR908562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908562 ID=DR908562; Name=DR908562; organism=Citrus sinensis; type=EST; length=616bpback to top |