DR908557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_EUPES (40S ribosomal protein S11 OS=Euphorbia esula GN=RPS11 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 7.158e-73 Identity = 121/125 (96.80%), Postives = 124/125 (99.20%), Query Frame = 3 Query: 126 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 500 NRFWKSIGLGFKTPREAI+GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG KKAFT Sbjct: 33 NRFWKSIGLGFKTPREAIDGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFT 157 HSP 2 Score: 37.3502 bits (85), Expect = 7.158e-73 Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 2 Query: 29 MAEQTEKAFLKQPKVFLS 82 MAEQTEKAFLKQPKVFL+ Sbjct: 1 MAEQTEKAFLKQPKVFLA 18
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_SOYBN (40S ribosomal protein S11 OS=Glycine max GN=RPS11 PE=2 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 1.588e-72 Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 3 Query: 126 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTG 503 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTG VSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAHISP FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS GAKKAFTG Sbjct: 33 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTG 158 HSP 2 Score: 38.5058 bits (88), Expect = 1.588e-72 Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 2 Query: 29 MAEQTEKAFLKQPKVFLS 82 MAEQTEKAFLKQPKVFLS Sbjct: 1 MAEQTEKAFLKQPKVFLS 18
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_MAIZE (40S ribosomal protein S11 OS=Zea mays GN=RPS11 PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.733e-71 Identity = 119/125 (95.20%), Postives = 122/125 (97.60%), Query Frame = 3 Query: 126 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 500 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV+KVIPAGS+ KKAFT Sbjct: 33 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAFT 157 HSP 2 Score: 38.5058 bits (88), Expect = 1.733e-71 Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 2 Query: 29 MAEQTEKAFLKQPKVFLS 82 MAEQTEKAFLKQPKVFLS Sbjct: 1 MAEQTEKAFLKQPKVFLS 18
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS113_ARATH (40S ribosomal protein S11-3 OS=Arabidopsis thaliana GN=RPS11C PE=2 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 9.305e-70 Identity = 116/126 (92.06%), Postives = 120/126 (95.24%), Query Frame = 3 Query: 126 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTG 503 NRFWK+IGLGFKTPREAI+G YID KCPFTGTVSIRGRILAGTCHSAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAG+S KKAFTG Sbjct: 33 NRFWKNIGLGFKTPREAIDGAYIDSKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTG 158 HSP 2 Score: 38.5058 bits (88), Expect = 9.305e-70 Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 2 Query: 29 MAEQTEKAFLKQPKVFLS 82 MAEQTEKAFLKQPKVFLS Sbjct: 1 MAEQTEKAFLKQPKVFLS 18
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS111_ARATH (40S ribosomal protein S11-1 OS=Arabidopsis thaliana GN=RPS11A PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 7.782e-69 Identity = 115/127 (90.55%), Postives = 121/127 (95.28%), Query Frame = 3 Query: 126 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG-AKKAFTG 503 NRFWK+IGLGFKTPREAI+G Y+DKKCPFTGTVSIRGRILAGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAH+SPCFRVKEGDH+IIGQCRPLSKTVRFNVLKVIPAGSS KKAFTG Sbjct: 33 NRFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTG 159 HSP 2 Score: 38.5058 bits (88), Expect = 7.782e-69 Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 2 Query: 29 MAEQTEKAFLKQPKVFLS 82 MAEQTEKAFLKQPKVFLS Sbjct: 1 MAEQTEKAFLKQPKVFLS 18
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS112_ARATH (40S ribosomal protein S11-2 OS=Arabidopsis thaliana GN=RPS11B PE=2 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 3.829e-68 Identity = 114/126 (90.48%), Postives = 120/126 (95.24%), Query Frame = 3 Query: 126 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTG 503 NRFWK+IGLGFKTPREAIEGTYID+KCPFTGTVSIRGRIL+GTCHSAKM RTIIVRR+YLHFVKKY+RYEKRHSNIPAH+SPCFRVKEGD V IGQCRPLSKTVRFNVLKVIPAGSS KKAFTG Sbjct: 33 NRFWKNIGLGFKTPREAIEGTYIDQKCPFTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKEGDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTG 158 HSP 2 Score: 38.5058 bits (88), Expect = 3.829e-68 Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 2 Query: 29 MAEQTEKAFLKQPKVFLS 82 MAEQTEKAFLKQPKVFLS Sbjct: 1 MAEQTEKAFLKQPKVFLS 18
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_DUNTE (40S ribosomal protein S11 OS=Dunaliella tertiolecta GN=RPS11 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.322e-51 Identity = 93/127 (73.23%), Postives = 113/127 (88.98%), Query Frame = 3 Query: 126 NRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP-AGSSGGAKKAFTG 503 +RF+K++GL FKTP+EAI+G Y+DKKCPFTG VSIRGRIL G S+KM RTIIVRR+YLHF+ KY RYEKRH+NIPAH+SPCFRV++GD VIIGQCRPLSKT+RFNVL+VIP AG++G KK+F+G Sbjct: 32 HRFFKNVGLNFKTPKEAIDGNYVDKKCPFTGNVSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPAHVSPCFRVRDGDTVIIGQCRPLSKTIRFNVLRVIPQAGATG--KKSFSG 156 HSP 2 Score: 24.6386 bits (52), Expect = 4.322e-51 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 29 MAEQTEKAFLKQ 64 MAEQTEKAF KQ Sbjct: 1 MAEQTEKAFQKQ 12
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_DICDI (40S ribosomal protein S11 OS=Dictyostelium discoideum GN=rps11 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.073e-45 Identity = 86/123 (69.92%), Postives = 102/123 (82.93%), Query Frame = 3 Query: 129 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 497 R++K+IGLG++TP++AIEGTYIDKKCPFT VSIRG IL GT S KM RT++VRRNYLH++KKY R+EKRHSNIPAH+SP F VKEGD V IGQCRPLSKTVRFNV+K + +S KAF Sbjct: 33 RYYKNIGLGYRTPKDAIEGTYIDKKCPFTSDVSIRGAILRGTVISTKMRRTLVVRRNYLHYIKKYNRFEKRHSNIPAHVSPAFNVKEGDSVTIGQCRPLSKTVRFNVIKHDISAASKKQFKAF 155
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_XENLA (40S ribosomal protein S11 OS=Xenopus laevis GN=rps11 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 3.465e-44 Identity = 83/124 (66.94%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 129 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 497 R+++S+GLGFKTPREAI+GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F Sbjct: 35 RYYRSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQVGDTVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155 HSP 2 Score: 22.7126 bits (47), Expect = 3.465e-44 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 38 QTEKAFLKQPKVF 76 QTE+A+ KQP +F Sbjct: 5 QTERAYQKQPTIF 17
BLAST of DR908557 vs. ExPASy Swiss-Prot
Match: RS11_RAT (40S ribosomal protein S11 OS=Rattus norvegicus GN=Rps11 PE=1 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 4.516e-44 Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 3 Query: 129 RFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 497 R++K+IGLGFKTP+EAIEGTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F Sbjct: 35 RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155 HSP 2 Score: 22.7126 bits (47), Expect = 4.516e-44 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 38 QTEKAFLKQPKVF 76 QTE+A+ KQP +F Sbjct: 5 QTERAYQKQPTIF 17 The following BLAST results are available for this feature:
BLAST of DR908557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908557 ID=DR908557; Name=DR908557; organism=Citrus sinensis; type=EST; length=617bpback to top |