EY680403

Overview
NameEY680403
Unique NameEY680403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.533e-97
Identity = 178/240 (74.17%), Postives = 197/240 (82.08%), Query Frame = 1
Query:   55 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFLGWGNFPKPE 774
            M RKFFVGGNWKCNGTSEEVKKIV+ LNEAE                     K+LLR+DFHVAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERRALLNESN+FVGDK AYALS+GLKVIACVGETLEQRE+GST++VVA QTKAIAEK+S+W N+V+AYEPVWAIGTGKVA+PAQAQEVH ELRKW+K+NV A+VA S +IIYGGS  G N KELA  PD +GFL  G   KPE
Sbjct:    1 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADFHVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQGLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKVASPAQAQEVHFELRKWIKENVGADVAGSVRIIYGGSVNGANSKELAGQPDIDGFLVGGASLKPE 240          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.435e-95
Identity = 176/240 (73.33%), Postives = 194/240 (80.83%), Query Frame = 1
Query:   55 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFLGWGNFPKPE 774
            M RKFFVGGNWKCNGT+EEVKKI++TLN A+                     K+ LR DFHVAAQNCWV+KGGAFTGEVSAEMLVNLSIPWVILGHSERRALL ESN+FVGDKVAYALS+GLKVIACVGETLE+RESGST+ VVA QTKAIA+++ +W NVV+AYEPVWAIGTGKVA+PAQAQEVHAELRKWL  NV  EVAAST+IIYGGS  G NCKEL   PD +GFL  G   KPE
Sbjct:    1 MGRKFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEERESGSTMDVVAAQTKAIADRVKDWTNVVVAYEPVWAIGTGKVASPAQAQEVHAELRKWLAANVSPEVAASTRIIYGGSVNGANCKELGGQPDVDGFLVGGASLKPE 240          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 347.436 bits (890), Expect = 5.451e-95
Identity = 174/240 (72.50%), Postives = 196/240 (81.67%), Query Frame = 1
Query:   55 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFLGWGNFPKPE 774
            MARKFFVGGNWKCNGT+EEVKKIV+TLNEA+                     KS LRSDF VAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERRA+LNES++FVGDKVAYAL++GLKVIACVGETLE+RE+GST+ VVA QTKAIA++++NW NVV+AYEPVWAIGTGKVA+PAQAQEVH ELRKWL  NV A+VAA+T+IIYGGS  G NCKEL    D +GFL  G   KPE
Sbjct:    1 MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQGLKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTNWSNVVIAYEPVWAIGTGKVASPAQAQEVHDELRKWLAKNVSADVAATTRIIYGGSVNGGNCKELGGQADVDGFLVGGASLKPE 240          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 345.51 bits (885), Expect = 2.071e-94
Identity = 174/240 (72.50%), Postives = 190/240 (79.17%), Query Frame = 1
Query:   55 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFLGWGNFPKPE 774
            M RKFFVGGNWKCNGT+++V+KIV TLNE +                     KS LR +FHVAAQNCWV+KGGAFTGEVSAEMLVNL +PWVILGHSERRALL ESN+FVGDKVAYALS+GLKVIACVGETLEQRE+GST+ VVA QTKAIAEKI +W NVV+AYEPVWAIGTGKVATPAQAQEVHA LR WLK N   EVA ST+IIYGGS    NCKELAA PD +GFL  G   KPE
Sbjct:    1 MGRKFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAEKIKDWSNVVVAYEPVWAIGTGKVATPAQAQEVHASLRDWLKTNASPEVAESTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLKPE 240          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3)

HSP 1 Score: 335.88 bits (860), Expect = 1.641e-91
Identity = 172/240 (71.67%), Postives = 188/240 (78.33%), Query Frame = 1
Query:   55 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFLGWGNFPKPE 774
            M RKFFVGGNWKCNGT+++V KIV  LNE +                     KS LR +  VAAQNCWV+KGGAFTGEVSAEMLVNLSIPWVILGHSERR+LL ESN+FVGDKVAYALS+GLKVIACVGETLEQRESGST+ VVA QTKAI+E+I +W NVV+AYEPVWAIGTGKVATP QAQEVH  LRKWL  NV AEVA ST+IIYGGS  G NCKELAA PD +GFL  G   KPE
Sbjct:    1 MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKVATPDQAQEVHDGLRKWLAANVSAEVAESTRIIYGGSVTGANCKELAAKPDVDGFLVGGASLKPE 240          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3)

HSP 1 Score: 327.405 bits (838), Expect = 5.838e-89
Identity = 166/240 (69.17%), Postives = 187/240 (77.92%), Query Frame = 1
Query:   55 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFLGWGNFPKPE 774
            M RKFFVGGNWKCNGT  +V+ IV+TLN  +                     K  LR +  VAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERR+LL ES++FVG+KVAYAL++GLKVIACVGETLEQRE+GST+ VVAEQTKAIA+KI +W NVV+AYEPVWAIGTGKVA+PAQAQEVHA LR WLK NV  EVA ST+IIYGGS  G +CKELAA PD +GFL  G   KPE
Sbjct:    1 MGRKFFVGGNWKCNGTVSQVETIVNTLNAGQIASPDVVEVVVSPPYVFLPTVKDKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRSLLAESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIADKIKDWTNVVVAYEPVWAIGTGKVASPAQAQEVHANLRDWLKTNVSPEVAESTRIIYGGSVTGASCKELAAQPDVDGFLVGGASLKPE 240          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 322.783 bits (826), Expect = 1.438e-87
Identity = 164/240 (68.33%), Postives = 184/240 (76.67%), Query Frame = 1
Query:   55 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFLGWGNFPKPE 774
            M RKFFVGGNWKCNGT E+V+ IV TLN  +                     K+ LR +  VAAQNCWV+KGGAFTGEVSAEML NL +PWVILGHSERR+LL ES++FVG+KVAYAL++GLKVIACVGETLEQRE+GST+ VVAEQTKAIA KI +W N V+AYEPVWAIGTGKVATPAQAQEVHA LR WLK NV  EVA ST+IIYGGS  G +CKELAA  D +GFL  G   KPE
Sbjct:    1 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQIVSPDVVEVVVSPPYVFLPIVKAKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRSLLGESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIAGKIKDWSNGVVAYEPVWAIGTGKVATPAQAQEVHANLRDWLKTNVSPEVAESTRIIYGGSVTGASCKELAAQADVDGFLVGGASLKPE 240          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 6.055e-78
Identity = 144/179 (80.45%), Postives = 159/179 (88.83%), Query Frame = 1
Query:  238 VAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFLGWGNFPKPE 774
            VAAQNCWV+KGGAFTGEVSAEML NL +PWVILGHSERRALLNE+N+FVGDKVAYALS+GLKVIACVGETLEQRE+G+T+ VVA QTKAIA+KIS+WDNVVLAYEPVWAIGTGKVA+PAQAQEVHA LRKW  DNV AEV+AST+IIYGGS  G+NCKEL    D +GFL  G   KPE
Sbjct:    3 VAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRALLNETNEFVGDKVAYALSQGLKVIACVGETLEQREAGTTMEVVAAQTKAIADKISSWDNVVLAYEPVWAIGTGKVASPAQAQEVHAGLRKWFCDNVSAEVSASTRIIYGGSVSGSNCKELGGQTDVDGFLVGGASLKPE 181          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.307e-72
Identity = 144/242 (59.50%), Postives = 162/242 (66.94%), Query Frame = 1
Query:   55 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFL-GWGNFPKPE 774
            M RKFFVGGNWKCNGT E V KIV TLNE                        + L+ +  VAAQNCWV+KGGAFTGEVSA+ML NL I WVILGHSERR LL ESN+FVG K AYA S GL VIAC+GE LE+RE+G T  V  +Q K+ A      WDNVV+AYEPVWAIGTGKVA+P QAQEVH  +R WLK NV  EVA+ T+IIYGGS  G N   LAA  D +GFL G  +   PE
Sbjct:    1 MGRKFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYAQSEGLGVIACIGELLEEREAGKTFDVCFKQLKSFARFPAKPWDNVVVAYEPVWAIGTGKVASPEQAQEVHVAVRDWLKTNVSEEVASKTRIIYGGSVNGGNSLALAAQEDVDGFLVGGASLKGPE 242          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.934e-69
Identity = 135/246 (54.88%), Postives = 164/246 (66.67%), Query Frame = 1
Query:   46 IVVMAR--KFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFL-GWGNFPKPE 774
            +V MA   KFFVGGNWKCNGT E + K+VS LN A                      KS L     ++AQNCW+ KGGAFTGE+S E L +L   WVILGHSERR ++ E N+F+G K AYAL++G+ VIAC+GE LE+RE+G T  V  +Q KA A+ + +WDNVV+AYEPVWAIGTGKVA+P QAQEVH  +R WLK NV  EVA+ T+IIYGGS  G NC ELA   D +GFL G  +   PE
Sbjct:   64 VVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYIDQV--KSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEFIGKKAAYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFADALPSWDNVVVAYEPVWAIGTGKVASPDQAQEVHVAVRDWLKKNVSEEVASKTRIIYGGSVNGGNCAELAKQEDIDGFLVGGASLKGPE 307          
The following BLAST results are available for this feature:
BLAST of EY680403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_COPJA1.533e-9774.17Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_PETHY1.435e-9573.33Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_ARATH5.451e-9572.50Triosephosphate isomerase, cytosolic OS=Arabidopsi... [more]
TPIS_MAIZE2.071e-9472.50Triosephosphate isomerase, cytosolic OS=Zea mays P... [more]
TPIS_ORYSJ1.641e-9171.67Triosephosphate isomerase, cytosolic OS=Oryza sati... [more]
TPIS_SECCE5.838e-8969.17Triosephosphate isomerase, cytosolic OS=Secale cer... [more]
TPIS_HORVU1.438e-8768.33Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
TPIS_LACSA6.055e-7880.45Triosephosphate isomerase, cytosolic (Fragment) OS... [more]
TPIS_STELP1.307e-7259.50Triosephosphate isomerase, cytosolic OS=Stellaria ... [more]
TPIC_SPIOL3.934e-6954.88Triosephosphate isomerase, chloroplastic OS=Spinac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-F12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680403 ID=EY680403; Name=EY680403; organism=Citrus sinensis; type=EST; length=815bp
CTCGTATTTTCGTCTCGCTTTCATCGCCAAACCAAACAAAATTCAATCGT
CGTCATGGCCCGCAAATTCTTCGTCGGCGGCAACTGGAAATGCAATGGGA
CATCTGAGGAAGTGAAGAAGATTGTTTCTACATTGAATGAAGCTGAAGTT
CCTTCTGAGGATGTTGTGGAGGTTGTTGTAAGCCCTCCGTTTGTGTTTCT
TCCTTTGGTCAAGAGTCTGTTGCGGTCTGATTTCCATGTTGCCGCTCAAA
ATTGCTGGGTTCGCAAAGGTGGTGCTTTTACCGGGGAAGTTAGTGCTGAG
ATGCTTGTCAACTTGAGCATTCCTTGGGTCATTCTTGGTCATTCTGAAAG
AAGAGCTCTTTTGAATGAGTCAAATGATTTTGTTGGAGATAAAGTTGCTT
ATGCACTTTCTCGAGGCTTGAAAGTCATTGCTTGTGTTGGAGAGACTCTG
GAACAGCGAGAATCAGGATCTACAGTGGCTGTTGTGGCTGAACAAACAAA
AGCAATCGCAGAAAAAATATCCAACTGGGACAATGTTGTGTTGGCTTATG
AGCCAGTTTGGGCCATTGGTACCGGGAAGGTTGCAACCCCTGCTCAGGCT
CAGGAAGTCCATGCTGAACTGAGGAAATGGCTTAAAGACAATGTCCGTGC
TGAAGTTGCAGCATCAACTAAAATCATCTACGGAGGGTCTGGTAAGGGAA
CAAATTGCAAAGAATTGGCAGCCACACCTGATGGTAATGGGTTTTTGGGT
TGGGGGAACTTTCCAAAGCCCGAGATTCATCAAAATTATCCAGTCCGGCA
CCATGGAAAAAAAAT
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