DR908540

Overview
NameDR908540
Unique NameDR908540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:471..1090. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.103e-65
Identity = 108/136 (79.41%), Postives = 122/136 (89.71%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LP NAPKC H NNHYDG MNFMHRDEE+DYFPSRYDP RHAE+YPIPS + TG+REK  I+KENNFKQPGERYRS+ PDRQERF+ RW++ L DPR+T+E+RSIW+SYWSQAD+SLGQKLASRLNVRPSI
Sbjct:  350 GPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDPVRHAEKYPIPSTMCTGKREKCVIQKENNFKQPGERYRSFTPDRQERFIRRWVETLSDPRITYEIRSIWISYWSQADKSLGQKLASRLNVRPSI 485          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.587e-65
Identity = 110/136 (80.88%), Postives = 125/136 (91.91%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL+LPVNAPKC + NNHYDGFMNFMHRDEEVDYFPS+YDPTRHAER+PIP+ VITGRR++  IEKE+NFKQ G+RYRSWAPDRQERFL RW+ AL DPR+T E+RSIWVSYWSQAD+S GQKLASRLNVRP++
Sbjct:  357 GPNYLLLPVNAPKCAYHNNHYDGFMNFMHRDEEVDYFPSKYDPTRHAERHPIPNAVITGRRDRRVIEKEDNFKQAGDRYRSWAPDRQERFLRRWVDALSDPRLTLEIRSIWVSYWSQADKSFGQKLASRLNVRPTM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 4.685e-65
Identity = 108/136 (79.41%), Postives = 124/136 (91.18%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LPVNAPKC H NNH++GFMNFMHRDEEV+YFPSR+DP RHAE+YPIP  V+TG+R+K  IEKENNFKQPGERYRSWAPDRQERF+ RW+ AL DPRVTHE+RSIW SYWSQAD++LGQK+ASRLNVRP++
Sbjct:  357 GPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPCRHAEQYPIPPCVLTGKRDKCIIEKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRSIWFSYWSQADKTLGQKIASRLNVRPTM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 7.991e-65
Identity = 109/136 (80.15%), Postives = 124/136 (91.18%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LP NAPKC H NNH++GFMNFMHRDEEV+YFPSRYDP RHAE++PIPS V++G+REK  I KENNFKQPGERYRS++ DRQERF+NRWI AL DPRVTHE+RSIW+SYWSQAD+SLGQK+ASRLNVRPSI
Sbjct:  357 GPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKHPIPSTVLSGKREKCIIGKENNFKQPGERYRSFSADRQERFINRWIDALSDPRVTHEIRSIWISYWSQADKSLGQKIASRLNVRPSI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 1.780e-64
Identity = 109/136 (80.15%), Postives = 120/136 (88.24%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LP NAPKC H NNH++GFMNFMHRDEE++YFPSRYDP RHAE +PIP  V TGRREK  IEKENNFKQPGERYRSWA DRQERF+ RW+ AL DPRVTHE+RSIW+SYWSQAD+S+GQKLAS LNVRPSI
Sbjct:  357 GPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEINYFPSRYDPVRHAEMFPIPPAVCTGRREKCIIEKENNFKQPGERYRSWAADRQERFICRWVDALSDPRVTHEIRSIWISYWSQADKSVGQKLASLLNVRPSI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 6.765e-64
Identity = 107/136 (78.68%), Postives = 121/136 (88.97%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LP NAPKC H NNHYDG MNFMHRDEE+DYFPSRYD  RHAE YPIPS V +G+REK  I+KENNFKQPGERYRS+ PDRQERF+ RW++AL DPR+T+E+RSIW++YWSQAD+SLGQKLASRLNVRPSI
Sbjct:  357 GPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDQVRHAEVYPIPSTVCSGKREKCIIQKENNFKQPGERYRSFTPDRQERFIRRWVEALSDPRITYEIRSIWITYWSQADKSLGQKLASRLNVRPSI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 8.835e-64
Identity = 105/136 (77.21%), Postives = 120/136 (88.24%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LP NAPKC H NNH++GFMNF+HRDEEV+YFPSRYDP RHAER+PIP  + +GRREK  IEKENNFKQPGERYRSWAPDRQ+RF  RW+ AL DPRVTHE+RS+W+SYWSQADRSLGQK+AS L+ RP+I
Sbjct:  357 GPNYLQLPANAPKCAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAERFPIPPAICSGRREKCGIEKENNFKQPGERYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 8.835e-64
Identity = 107/136 (78.68%), Postives = 120/136 (88.24%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LP NAPKC H NNH++GFMNFMHRDEEV+YFPSR+DP+RHAERYP P  V +G+RE+  IEKENNFK+PGERYRSW PDRQERF+ RW+ AL D RVTHE+RSIW+SYWSQADRSLGQKLAS LNVRPSI
Sbjct:  357 GPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPSRHAERYPHPPAVCSGKRERCIIEKENNFKEPGERYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.507e-63
Identity = 105/136 (77.21%), Postives = 119/136 (87.50%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LP NAPKC H NNH+DGFMNFMHRDEEV+YFPSRYDP RHAE+ P+P  ++ G+REK  IEKENNFKQPGERYRSW  DRQERF+ RW+ AL DPRVTHE+RSIW+SYWSQADRSLGQK+AS LN++PSI
Sbjct:  357 GPNYLQLPANAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAEKVPVPPRILGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.571e-63
Identity = 107/135 (79.26%), Postives = 121/135 (89.63%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPS 406
            GPNYL LP NAPKC H NNHYDGFMNFMHRDEE+DYFPSRYDP RHAE+YPIP   ++G+R+K  IEKENNFKQPGERYRS++PDRQERF+NR +  L DPRVTHEVRSIWVSYWSQAD+SLGQK+ASRLNV+P+
Sbjct:  357 GPNYLQLPANAPKCAHHNNHYDGFMNFMHRDEEIDYFPSRYDPARHAEQYPIPPVRLSGKRDKCVIEKENNFKQPGERYRSFSPDRQERFINRVVGGLSDPRVTHEVRSIWVSYWSQADKSLGQKIASRLNVKPN 491          
The following BLAST results are available for this feature:
BLAST of DR908540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CATA1_NICPL2.103e-6579.41Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA_AVIMR3.587e-6580.88Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA3_NICPL4.685e-6579.41Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA2_GOSHI7.991e-6580.15Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA1_GOSHI1.780e-6480.15Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA2_SOLLC6.765e-6478.68Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2... [more]
CATA4_SOYBN8.835e-6477.21Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA1_CUCPE8.835e-6478.68Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA1_SOYBN1.507e-6377.21Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]
CATA_HELAN2.571e-6379.26Catalase OS=Helianthus annuus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16668 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-56_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908540 ID=DR908540; Name=DR908540; organism=Citrus sinensis; type=EST; length=620bp
TGGACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATC
GCAACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAG
GTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATA
TCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTG
AGAAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCC
CCAGACAGGCAAGAGAGGTTCCTTAATCGATGGATTAAGGCTTTATGTGA
CCCACGTGTCACCCATGAGGTTCGCAGCATATGGGTCTCTTACTGGTCTC
AGGCCGACAGATCTCTGGGTCAGAAGCTAGCTTCTCGTCTCAATGTGAGG
CCAAGCATTTGAAGGTGTCACTTGAACTGGAACACTGGATGCTTTTGACT
TGCCAAGAGTAAGCAAGGAGTGAACACCAAGGGTGCAGCTATGTGAAGAA
TTTCGATCCTATGTTTGCTGTTGTATATTGTAATATAGAAAATAAACTTG
CATGTTATGTGACTCTTTTCCTGTTGTTTCAATTAATAAAAGTCTGTTTT
ATGAAGTTCAAAAAAAAAAA
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