DR908537

Overview
NameDR908537
Unique NameDR908537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908537 vs. ExPASy Swiss-Prot
Match: SDE3_ARATH (Probable RNA helicase SDE3 OS=Arabidopsis thaliana GN=SDE3 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.629e-25
Identity = 70/210 (33.33%), Postives = 118/210 (56.19%), Query Frame = 1
Query:    1 QAIAAASRSLFKNYLFPDFVSRKNISSSETCLYGNRNLDSNGNSVVRRILSLHGSPPYLVEGPLCATSDNLSKTGLVVQEAVLEIYKRSSQCRILVCAPINRTGDVLMRSLK----KKIPKSDMFRANAAFREVDGVPVDILPSCLYEEGKGFQLPSLQELMQFRVIFSTFTSSFRLHNEGIPAGHFSHIFLLDASSATEPETMIALTNL 618
            QA+ AA   L  N+LFP   S K +  ++  +  +  L++     +  +L   G+PPY++ GP         KT  +V EA++++Y      R+LVCAP N   D ++  L      +I  +++FR NAA R  + +  +I+  C ++E   F+ P L+ L +++++ ST+ S+  L+ EG+  GHF+HI L +A  A+EPE MIA++NL
Sbjct:  361 QAVDAAEM-LDPNFLFPSLHSGKRMIKTKPFVPISPALNAEQICSIEMVLGCKGAPPYVIHGP-----PGTGKTMTLV-EAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDE-LIFKCPPLKALTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNL 562          
BLAST of DR908537 vs. ExPASy Swiss-Prot
Match: MOV10_BOVIN (Putative helicase MOV-10 OS=Bos taurus GN=MOV10 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.075e-19
Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 1
Query:  103 NRNLDSNGNSVVRR---ILSLHGSPPYLVEGPLCATSDNLSKTGLVVQEAVLEIYKRSSQCRILVCAPINRTGDVLMRSLKKKIPKSDMFRANAAFREVDGVPVDILPSCLYEEGKG-FQLPSLQELMQFRVIFSTFTSSFRLHNEGIPAGHFSHIFLLDASSATEPETMIALTNL 618
            +R+L+SN   +      ++      PY++ GP         KT  +V EA+ ++ K   +  IL CAP N   D+L + L+  +P S ++R  A  R++  VP DI P C ++  KG F  PS ++L ++RV+ +T  ++ RL +   P  HF+HIF+ +A  A EPE+++A+  L
Sbjct:  494 DRSLESNPEQLQAMKHIVMGTTRPAPYIIFGP-----PGTGKTVTLV-EAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSS-IYRLLAPSRDIHLVPEDIKPCCNWDAKKGDFVFPSKKKLQEYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHAMEPESLVAIAGL 662          
BLAST of DR908537 vs. ExPASy Swiss-Prot
Match: MOV10_CHICK (Putative helicase MOV-10 OS=Gallus gallus GN=MOV10 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.477e-18
Identity = 61/205 (29.76%), Postives = 100/205 (48.78%), Query Frame = 1
Query:   10 AAASRSLFKNYLFPDFVSRKNISSSETCLYGNRNLDSNGNSVVRRILSLHGSP-PYLVEGPLCATSDNLSKTGLVVQEAVLEIYKRSSQCRILVCAPINRTGDVLMRSLKKKIPKSDMFRANAAFREVDGVPVDILPSCLYEEG-KGFQLPSLQELMQFRVIFSTFTSSFRLHNEGIPAGHFSHIFLLDASSATEPETMIALTNL 618
            A+  RSLF     P +  RK  ++ E C              V+ I++    P PYL+ GP         KT  +V EA+ +++      RIL CAP N   D+L + L   I    ++R  A+      VP D+ P C +++  K +  PS + L  +R++ +T  ++ RL +   P G+FSH+F+ +   A EPE+++A+  L
Sbjct:  469 ASCQRSLFTGIFQPRWFDRKVEANEEQC------------QAVKHIVTGMSRPAPYLIFGP-----PGTGKTVTLV-EAIKQVWSCFKDARILACAPSNSAADLLCQRLLTNIAPRYIYRIMASSANYKDVPADVRPCCNWDDSEKCYVYPSKKLLKPYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAIAGL 655          
BLAST of DR908537 vs. ExPASy Swiss-Prot
Match: MOV10_HUMAN (Putative helicase MOV-10 OS=Homo sapiens GN=MOV10 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.929e-18
Identity = 68/214 (31.78%), Postives = 117/214 (54.67%), Query Frame = 1
Query:    1 QAIAAASRSLFKNYLFPDFVSRKNI----SSSETCLYGNRNLDSNGNSV--VRRILSLHGSP-PYLVEGPLCATSDNLSKTGLVVQEAVLEIYKRSSQCRILVCAPINRTGDVLMRSLKKKIPKSDMFRANAAFREVDGVPVDILPSCLYEEGKG-FQLPSLQELMQFRVIFSTFTSSFRLHNEGIPAGHFSHIFLLDASSATEPETMIALTNL 618
            +A+    R L    LFP  V+ +++    S  +  LY +R+L+SN   +  +R I++    P PY++ GP         KT  +V EA+ ++ K   +  IL CAP N   D+L + L+  +P S ++R  A  R++  VP DI P C ++  KG +  P+ ++L ++RV+ +T  ++ RL +   P  HF+HIF+ +A    EPE+++A+  L
Sbjct:  459 RALELTGRWLLWPMLFP--VAPRDVPLLPSDVKLKLY-DRSLESNPEQLQAMRHIVTGTTRPAPYIIFGP-----PGTGKTVTLV-EAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSS-IYRLLAPSRDIRMVPEDIKPCCNWDAKKGEYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGL 662          
BLAST of DR908537 vs. ExPASy Swiss-Prot
Match: MOV10_MOUSE (Putative helicase MOV-10 OS=Mus musculus GN=Mov10 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.637e-17
Identity = 56/176 (31.82%), Postives = 95/176 (53.98%), Query Frame = 1
Query:  103 NRNLDSNGNSVVRRILSLHGSP---PYLVEGPLCATSDNLSKTGLVVQEAVLEIYKRSSQCRILVCAPINRTGDVLMRSLKKKIPKSDMFRANAAFREVDGVPVDILPSCLYEEGKG-FQLPSLQELMQFRVIFSTFTSSFRLHNEGIPAGHFSHIFLLDASSATEPETMIALTNL 618
            +R+L+SN   +      + G+    PY++ GP         KT  +V EA+ ++ K   +  IL CAP N   D+L + L+  +P S ++R  A  R++  VP DI   C ++  KG +  P+ + L Q+RV+ +T  ++ RL +   P  HF+HIF+ +A    EPE+++A+  L
Sbjct:  495 DRSLESNPEQLQAMKHIVRGTTRPAPYIIFGP-----PGTGKTVTLV-EAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSS-IYRLLAPSRDIRMVPEDIKTCCNWDAKKGEYVYPAKKHLQQYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGL 663          
BLAST of DR908537 vs. ExPASy Swiss-Prot
Match: MV10A_DANRE (Putative helicase mov-10-A OS=Danio rerio GN=mov10a PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16
Identity = 63/200 (31.50%), Postives = 99/200 (49.50%), Query Frame = 1
Query:   34 KNYLFPDFVSRKNISSSETCLYGNRNLDSNGN--SVVRRILSLHGSP-PYLVEGPLCATSDNLSKTGLVVQEAVLEIYKRSSQCRILVCAPINRTGDVLMRSL--KKKIPKSDMFRANAAFREVDGVPVDILPSCLYEEGKGFQLPSLQELMQFRVIFSTFTSSFRLHNEGIPAGHFSHIFLLDASSATEPETMIALTNL 618
            K+ LFP    R N  S       ++ L+ N    + V  I++    P PYLV GP         KT  +V EA+ ++ K +   RIL CAP N   D L   L   + +   +++R  A+ R    +P  +L +    EG+    P  ++LM ++++  T  ++ RL + G P GHFSHIF+ +A  A EPE +I++  L
Sbjct:  497 KDVLFPVASRRLNPVSPSALRLFDQKLEKNPEQKTAVCNIVAGTSKPAPYLVFGP-----PGTGKTVTIV-EAIKQVEKNTGGARILACAPSNSAADQLGEKLITSQHVDARNIYRIYASSRNPKEIP-KVLENNSNVEGENIIFPCKEDLMPYKIVVCTLVTAGRLVSGGFPVGHFSHIFVDEAGHAVEPEIVISVAGL 689          
BLAST of DR908537 vs. ExPASy Swiss-Prot
Match: M10L1_MOUSE (Putative helicase Mov10l1 OS=Mus musculus GN=Mov10l1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.690e-14
Identity = 60/172 (34.88%), Postives = 89/172 (51.74%), Query Frame = 1
Query:  103 NRNLDSNGNSVVRRILSLHGSP-PYLVEGPLCATSDNLSKTGLVVQEAVLEIYKRSSQCRILVCAPINRTGD-VLMRSLKKKIPK-SDMFRANAAFREVDGVPVDILPSCLYEEGKGFQLPSLQELMQFRVIFSTFTSSFRLHNEGIPAGHFSHIFLLDASSATEPETMIAL 609
            N  L+ N    VRRILS    P PY++ GP         KT  ++ EAVL+++      RILVCAP N   D V +R  + K+PK + M R NA  R  + +   I P C   E        +    +FR+I +T +S+   +  G+  G+F+H+F+ +A  A+EPE +I L
Sbjct:  744 NPVLNENQKLAVRRILSGDCRPLPYILFGP-----PGTGKTVTII-EAVLQVHYALPDSRILVCAPSNSAADLVCLRLHESKVPKPAAMVRVNATCRFEETIIDAIKPYCRDGE-------DIWRASRFRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPL 902          
BLAST of DR908537 vs. ExPASy Swiss-Prot
Match: M10L1_HUMAN (Putative helicase Mov10l1 OS=Homo sapiens GN=MOV10L1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.764e-14
Identity = 60/189 (31.75%), Postives = 92/189 (48.68%), Query Frame = 1
Query:   52 DFVSRKNISSSETCLYGNRNLDSNGNSVVRRILSLHGSP-PYLVEGPLCATSDNLSKTGLVVQEAVLEIYKRSSQCRILVCAPINRTGDVLMRSL--KKKIPKSDMFRANAAFREVDGVPVDILPSCLYEEGKGFQLPSLQELMQFRVIFSTFTSSFRLHNEGIPAGHFSHIFLLDASSATEPETMIAL 609
            D+V       +    + N  L+ N    V+RILS    P PY++ GP         KT  ++ EAVL+++      RILVCAP N   D++   L   K +  + M R NA  R  + V   + P C   E        + +  +FR+I +T +SS   +  G+  GHF+H+F+ +A  A+EPE +I L
Sbjct:  725 DWVDEIQTPKARKMEFFNPVLNENQKLAVKRILSGDCRPLPYILFGP-----PGTGKTVTII-EAVLQVHFALPDSRILVCAPSNSAADLVCLRLHESKVLQPATMVRVNATCRFEEIVIDAVKPYCRDGE-------DIWKASRFRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPL 900          
BLAST of DR908537 vs. ExPASy Swiss-Prot
Match: MV10B_DANRE (Putative helicase mov-10-B OS=Danio rerio GN=mov10b PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.523e-12
Identity = 60/211 (28.44%), Postives = 96/211 (45.50%), Query Frame = 1
Query:    1 QAIAAASRSLFKNYLFPDFVSRKNISSSETCLYGNRNLDSNGN--SVVRRILSLHGSP-PYLVEGPLCATSDNLSKTGLVVQEAVLEIYKRSSQCRILVCAPINRTGDVLMRSL--KKKIPKSDMFRANAAFREVDGVPVDILPSCLYEEGKGFQLPSLQELMQFRVIFSTFTSSFRLHNEGIPAGHFSHIFLLDASSATEPETMIALTNL 618
            +A+  A +   K+ LFP      N  S       +R L+ N    S V  I++    P PYLV GP         KT  +V EA+ ++ K      IL CAP N   D L   L   + +    ++R  A+ R    +P  +  +C  +E +    P  ++LM ++++  T  ++ RL   G    HF+H F+ +A  A E ET+I++  L
Sbjct:  491 RAVHMAVQHNLKDVLFPMASRSLNPVSPPALRLFDRKLEYNFQQYSAVCNIVAGTSKPAPYLVFGP-----PGTGKTVTIV-EAIKQVEKNIPDAYILACAPSNSAADQLCEKLITSEHVDAHKIYRLYASSRNQKDIPKILKDNCNVDE-EMIDFPCKEDLMSYKILICTLVTAGRLVTGGFSEDHFTHNFVDEAGHAVESETIISVAGL 694          
The following BLAST results are available for this feature:
BLAST of DR908537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
SDE3_ARATH3.629e-2533.33Probable RNA helicase SDE3 OS=Arabidopsis thaliana... [more]
MOV10_BOVIN5.075e-1932.95Putative helicase MOV-10 OS=Bos taurus GN=MOV10 PE... [more]
MOV10_CHICK1.477e-1829.76Putative helicase MOV-10 OS=Gallus gallus GN=MOV10... [more]
MOV10_HUMAN1.929e-1831.78Putative helicase MOV-10 OS=Homo sapiens GN=MOV10 ... [more]
MOV10_MOUSE3.637e-1731.82Putative helicase MOV-10 OS=Mus musculus GN=Mov10 ... [more]
MV10A_DANRE2.358e-1631.50Putative helicase mov-10-A OS=Danio rerio GN=mov10... [more]
M10L1_MOUSE1.690e-1434.88Putative helicase Mov10l1 OS=Mus musculus GN=Mov10... [more]
M10L1_HUMAN3.764e-1431.75Putative helicase Mov10l1 OS=Homo sapiens GN=MOV10... [more]
MV10B_DANRE3.523e-1228.44Putative helicase mov-10-B OS=Danio rerio GN=mov10... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16665 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-24_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908537 ID=DR908537; Name=DR908537; organism=Citrus sinensis; type=EST; length=620bp
CAAGCAATTGCAGCTGCATCACGTTCTTTATTTAAGAACTACCTTTTTCC
CGATTTTGTCTCTCGAAAGAACATCAGTTCCTCAGAAACTTGTCTTTATG
GTAATCGTAACCTTGACTCAAATGGCAACTCTGTAGTTCGTCGGATCCTA
AGCTTACATGGGAGCCCACCTTATCTTGTAGAGGGTCCACTCTGTGCAAC
TAGTGACAATCTATCCAAAACTGGATTGGTTGTTCAAGAAGCAGTACTTG
AAATTTATAAGAGGTCATCTCAGTGTCGAATTCTAGTCTGTGCTCCTATA
AATAGAACAGGTGATGTACTAATGAGAAGTTTGAAGAAGAAGATTCCAAA
GTCTGATATGTTTCGAGCCAACGCTGCATTCAGAGAGGTAGATGGGGTAC
CAGTTGACATCCTCCCCTCGTGCCTTTATGAAGAGGGGAAGGGTTTTCAA
TTGCCTTCACTTCAGGAATTGATGCAATTCAGGGTAATATTCTCAACTTT
TACAAGCAGCTTTCGCCTCCACAACGAGGGCATACCTGCTGGACATTTTA
GTCACATTTTTCTTCTTGATGCCTCATCTGCTACTGAGCCAGAGACAATG
ATAGCTCTCACAAATTTGGC
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