DR908501

Overview
NameDR908501
Unique NameDR908501
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6065 contig Csv1_Contig6065:898..1524. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908501 vs. ExPASy Swiss-Prot
Match: UBQL1_PONAB (Ubiquilin-1 OS=Pongo abelii GN=UBQLN1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.405e-32
Identity = 73/177 (41.24%), Postives = 100/177 (56.50%), Query Frame = 2
Query:    2 NPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARPQTPAGIAGLSS 532
            NP++MR LIM NPQM+++I RNPE++H+LN+P  +RQTLE ARNP +M+EMMRN DRA+SN+ES P G+N LRRMY  +QEP L+A            NPFA+L+      +                      N +PLPNPW              +S++G     T +G +G S+
Sbjct:  201 NPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQ-----EQFGGNPFASLVSNTSSGEG--------------SQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQST 358          
BLAST of DR908501 vs. ExPASy Swiss-Prot
Match: UBQL1_HUMAN (Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.405e-32
Identity = 73/177 (41.24%), Postives = 100/177 (56.50%), Query Frame = 2
Query:    2 NPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARPQTPAGIAGLSS 532
            NP++MR LIM NPQM+++I RNPE++H+LN+P  +RQTLE ARNP +M+EMMRN DRA+SN+ES P G+N LRRMY  +QEP L+A            NPFA+L+      +                      N +PLPNPW              +S++G     T +G +G S+
Sbjct:  201 NPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQ-----EQFGGNPFASLVSNTSSGEG--------------SQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQST 358          
BLAST of DR908501 vs. ExPASy Swiss-Prot
Match: UBQL_DICDI (Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.130e-32
Identity = 71/144 (49.31%), Postives = 90/144 (62.50%), Query Frame = 2
Query:    2 NPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATS-MAGNAGNDNSNPFAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPW 430
            NP+I R+++M NP+MRE+++ NPE+A +L+DP  LRQ+LE  RNPELMREMMRN DRAM NIE+ PEGFN+LRRMY  +QEP +NA +  A +    NSNP       Q    A                    PN+ PLPNPW
Sbjct:  128 NPDIFRDMMMGNPEMREVLNNNPEMAQMLSDPRQLRQSLEMMRNPELMREMMRNADRAMINIENHPEGFNLLRRMYTDIQEPLMNAANQQAASQNQTNSNPI------QTNTDAN-------------------PNSQPLPNPW 246          
BLAST of DR908501 vs. ExPASy Swiss-Prot
Match: UBQL1_MOUSE (Ubiquilin-1 OS=Mus musculus GN=Ubqln1 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.029e-31
Identity = 68/143 (47.55%), Postives = 89/143 (62.24%), Query Frame = 2
Query:    2 NPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPW 430
            NP++MR LIM NPQM+++I RNPE++H+LN+P  +RQTLE ARNP +M+EMMRN DRA+SN+ES P G+N LRRMY  +QEP LNA            NPFA+L+ +    +                      N +PLPNPW
Sbjct:  192 NPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLNAAQ-----EQFGGNPFASLVSSSSSAEG--------------TQPSRTENRDPLPNPW 315          
BLAST of DR908501 vs. ExPASy Swiss-Prot
Match: UBQL4_MOUSE (Ubiquilin-4 OS=Mus musculus GN=Ubqln4 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.718e-30
Identity = 66/144 (45.83%), Postives = 92/144 (63.89%), Query Frame = 2
Query:    2 NPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEP-FLNATSMAGNAGNDNSNPFAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPW 430
            NP++MR++IM NPQM+++++RNPE++H+LN+P  +RQT+E ARNP +M+EMMRN DRA+SN+ES P G+N LRRMY  +QEP F  A    GN      NPF++L G    + ++                    N  PLPNPW
Sbjct:  206 NPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEPMFTAAREQFGN------NPFSSLAGNSDNSSSQ---------------PLRTENREPLPNPW 328          
BLAST of DR908501 vs. ExPASy Swiss-Prot
Match: UBQL4_HUMAN (Ubiquilin-4 OS=Homo sapiens GN=UBQLN4 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.243e-30
Identity = 66/144 (45.83%), Postives = 92/144 (63.89%), Query Frame = 2
Query:    2 NPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEP-FLNATSMAGNAGNDNSNPFAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPW 430
            NP++MR++IM NPQM+++++RNPE++H+LN+P  +RQT+E ARNP +M+EMMRN DRA+SN+ES P G+N LRRMY  +QEP F  A    GN      NPF++L G    + ++                    N  PLPNPW
Sbjct:  211 NPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGN------NPFSSLAGNSDSSSSQ---------------PLRTENREPLPNPW 333          
BLAST of DR908501 vs. ExPASy Swiss-Prot
Match: UBQL1_RAT (Ubiquilin-1 OS=Rattus norvegicus GN=Ubqln1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.930e-30
Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 2
Query:    2 NPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPW 430
            NP++MR LIM NPQM+++I RNPE++H+LN+P+ +RQTLE ARNP +M+EMMRN +R +SN+ES P G+N LRRMY  +QEP LNA            NPFA+L+ +    +                      N +PLPNPW
Sbjct:  192 NPDLMRQLIMANPQMQQLIQRNPEISHMLNNPNIMRQTLELARNPAMMQEMMRNQERDLSNLESIPGGYNALRRMYTDIQEPMLNAAQ-----EQFGGNPFASLVSSPSSAEG--------------TQPSRTENRDPLPNPW 315          
BLAST of DR908501 vs. ExPASy Swiss-Prot
Match: UBQL2_HUMAN (Ubiquilin-2 OS=Homo sapiens GN=UBQLN2 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 4.997e-30
Identity = 66/143 (46.15%), Postives = 87/143 (60.84%), Query Frame = 2
Query:    2 NPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPW 430
            NP++MR LIM NPQM+++I RNPE++H+LN+P  +RQTLE ARNP +M+EMMRN D A+SN+ES P G+N LRRMY  +QEP LNA            NPFA++  +    +                      N +PLPNPW
Sbjct:  197 NPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQ-----EQFGGNPFASVGSSSSSGEG--------------TQPSRTENRDPLPNPW 320          
BLAST of DR908501 vs. ExPASy Swiss-Prot
Match: UBQL2_MOUSE (Ubiquilin-2 OS=Mus musculus GN=Ubqln2 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.113e-29
Identity = 66/143 (46.15%), Postives = 86/143 (60.14%), Query Frame = 2
Query:    2 NPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPW 430
            NP++MR LIM NPQM+++I RNPE++H+LN+P  +RQTLE ARNP +M+EMMRN D A+SN+ES P G+N LRRMY  +QEP LNA            NPFA +  +    +                      N +PLPNPW
Sbjct:  208 NPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNPAMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQ-----EQFGGNPFATVGSSSTSGEG--------------TQPSRTENRDPLPNPW 331          
BLAST of DR908501 vs. ExPASy Swiss-Prot
Match: UBQL3_MOUSE (Ubiquilin-3 OS=Mus musculus GN=Ubqln3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.989e-24
Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 2
Query:    2 NPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPW 430
            N  ++R L+++NP M+ +I +NPE+ HILN+P  +RQT+E  RNP +M+EMMR+ DRA+SN+ES P G+N+LR MY  + +P LNA       GN       A   T     +R                    N +PLPNPW
Sbjct:  183 NTGLVRQLVLDNPHMQHLIQQNPEIGHILNNPEIMRQTMEFLRNPSMMQEMMRSQDRALSNLESIPGGYNVLRTMYTDIMDPMLNAVQEQFG-GNPFVTATTASTTTTSSQPSR------------------TENCDPLPNPW 306          
The following BLAST results are available for this feature:
BLAST of DR908501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
UBQL1_PONAB1.405e-3241.24Ubiquilin-1 OS=Pongo abelii GN=UBQLN1 PE=2 SV=1[more]
UBQL1_HUMAN1.405e-3241.24Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1 SV=2[more]
UBQL_DICDI3.130e-3249.31Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=... [more]
UBQL1_MOUSE2.029e-3147.55Ubiquilin-1 OS=Mus musculus GN=Ubqln1 PE=1 SV=1[more]
UBQL4_MOUSE1.718e-3045.83Ubiquilin-4 OS=Mus musculus GN=Ubqln4 PE=1 SV=1[more]
UBQL4_HUMAN2.243e-3045.83Ubiquilin-4 OS=Homo sapiens GN=UBQLN4 PE=1 SV=2[more]
UBQL1_RAT2.930e-3046.15Ubiquilin-1 OS=Rattus norvegicus GN=Ubqln1 PE=1 SV... [more]
UBQL2_HUMAN4.997e-3046.15Ubiquilin-2 OS=Homo sapiens GN=UBQLN2 PE=1 SV=2[more]
UBQL2_MOUSE1.113e-2946.15Ubiquilin-2 OS=Mus musculus GN=Ubqln2 PE=1 SV=1[more]
UBQL3_MOUSE6.989e-2439.86Ubiquilin-3 OS=Mus musculus GN=Ubqln3 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16629 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-14_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908501 ID=DR908501; Name=DR908501; organism=Citrus sinensis; type=EST; length=627bp
TAACCCTGAGATAATGCGAAACTTGATAATGAACAATCCTCAAATGCGTG
AAATTATTGATCGAAACCCTGAGCTAGCACACATACTAAATGACCCTAGC
ACTCTGCGTCAGACACTTGAAGCTGCAAGAAATCCAGAGCTCATGCGTGA
AATGATGCGCAATACTGATAGAGCAATGAGCAATATTGAATCTTCTCCTG
AGGGATTTAATATGCTGAGGCGCATGTATGAAACTGTGCAAGAGCCATTT
CTTAATGCTACCTCTATGGCTGGGAATGCTGGAAATGACAACTCAAACCC
ATTTGCAGCTCTTTTGGGTACTCAGGGTGGAAACCAAGCCAGAGAAGGAT
CGAATAACCCATCTACCACTACGTCTGAATCTACCACTGGTTCTCCTGCT
CCAAACACTAACCCACTTCCTAATCCTTGGATGGCTGCTGGAACTGGAGG
TGCTCAAACAAACACCACAAGGTCAAGTTCTCTTGGGGATGCTAGGCCAC
AGACACCTGCTGGAATAGCTGGACTTAGTTCCCCTGGTTTTGAAGACATT
TTCGGTACAATGCAGGACACCAATTCACTGACCAGATGTTGCAAAATCCA
GCTGTCACACAAATGATGCAAGCCTTC
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