DR908493

Overview
NameDR908493
Unique NameDR908493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR908493_ssr61 microsatellite DR908493_ssr61:61..76. BLAST: Citrus ESTs to Prunus persica proteins V1
DR908493_ssr96 microsatellite DR908493_ssr96:96..107. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13150 contig Csv1_Contig13150:183..812. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908493 vs. ExPASy Swiss-Prot
Match: XPP1_RAT (Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus GN=Xpnpep1 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.976e-42
Identity = 82/148 (55.41%), Postives = 103/148 (69.59%), Query Frame = 3
Query:  123 GHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYMSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSRCRDILAPYLD----ETELAWL 551
            GH LD  AR  LW  GLDY HGTGHGVGS+LNVHEGP  IS+K   + P+ A M  TDEPGYYEDG FGIR+ENV++V  A TK+NF ++G ++FE +T  P Q KMI++ +LT +E DWLN+YH  CRD++   L     +  L WL
Sbjct:  465 GHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDALTDKECDWLNSYHQTCRDVIGKELQTQGRQEALEWL 612          
BLAST of DR908493 vs. ExPASy Swiss-Prot
Match: XPP1_MOUSE (Xaa-Pro aminopeptidase 1 OS=Mus musculus GN=Xpnpep1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.976e-42
Identity = 82/148 (55.41%), Postives = 103/148 (69.59%), Query Frame = 3
Query:  123 GHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYMSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSRCRDILAPYLD----ETELAWL 551
            GH LD  AR  LW  GLDY HGTGHGVGS+LNVHEGP  IS+K   + P+ A M  TDEPGYYEDG FGIR+ENV++V  A TK+NF ++G ++FE +T  P Q KMI++ +LT +E DWLN+YH  CRD++   L     +  L WL
Sbjct:  465 GHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPAKTKYNFNNRGSLTFEPLTLVPIQTKMIDVNALTDKECDWLNSYHQTCRDVVGKELQSQGRQEALEWL 612          
BLAST of DR908493 vs. ExPASy Swiss-Prot
Match: XPP1_BOVIN (Xaa-Pro aminopeptidase 1 OS=Bos taurus GN=XPNPEP1 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.403e-42
Identity = 82/148 (55.41%), Postives = 102/148 (68.92%), Query Frame = 3
Query:  123 GHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYMSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSRCRDILAPYLD----ETELAWL 551
            GH LD  AR  LW  GLDY HGTGHGVGS+LNVHEGP  IS+K   + P+ A M  TDEPGYYEDG FGIR+ENV++V    TK+NF ++G ++FE +T  P Q KMI++ SLT +E DWLN+YH  CRD++   L     +  L WL
Sbjct:  465 GHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNSYHLTCRDVIGKELQKQGRQEALEWL 612          
BLAST of DR908493 vs. ExPASy Swiss-Prot
Match: XPP1_HUMAN (Xaa-Pro aminopeptidase 1 OS=Homo sapiens GN=XPNPEP1 PE=1 SV=3)

HSP 1 Score: 169.859 bits (429), Expect = 9.809e-42
Identity = 82/148 (55.41%), Postives = 101/148 (68.24%), Query Frame = 3
Query:  123 GHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYMSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSRCRDILAPYLD----ETELAWL 551
            GH LD  AR  LW  GLDY HGTGHGVGS+LNVHEGP  IS+K   + P+ A M  TDEPGYYEDG FGIR+ENV++V    TK+NF ++G ++FE +T  P Q KMI++ SLT +E DWLN YH  CRD++   L     +  L WL
Sbjct:  465 GHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNFNNRGSLTFEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEALEWL 612          
BLAST of DR908493 vs. ExPASy Swiss-Prot
Match: XPP1_DICDI (Xaa-Pro aminopeptidase 1 OS=Dictyostelium discoideum GN=xpnpep1 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.274e-37
Identity = 77/156 (49.36%), Postives = 106/156 (67.95%), Query Frame = 3
Query:  123 GHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPRNVP--IHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYMSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSRCRDILAPYLDET----ELAWLK---KPL 563
            G  +D +AR  LW  GLDY HGTGHGVGS+LNVHEGPQ IS++    P  + A MT T+EPGYYE GNFGIR+ENV++V    T+FN G   ++ F++IT  PY+ K+INL+ LT +EI+++N Y+    + + P +++T     + WLK   KPL
Sbjct:  474 GRDIDCVARTHLWSVGLDYAHGTGHGVGSFLNVHEGPQGISYRAIANPTNLQAGMTLTNEPGYYESGNFGIRIENVMIVAPVTTQFNNGK--FIGFDNITLVPYERKLINLEMLTKDEINFINDYYKEIGEKILPLIEKTNNQKSINWLKNQIKPL 627          
BLAST of DR908493 vs. ExPASy Swiss-Prot
Match: YAA1_SCHPO (Uncharacterized peptidase C22G7.01c OS=Schizosaccharomyces pombe GN=SPAC22G7.01c PE=2 SV=4)

HSP 1 Score: 148.288 bits (373), Expect = 3.056e-35
Identity = 69/147 (46.94%), Postives = 97/147 (65.99%), Query Frame = 3
Query:  123 GHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYMSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSRCRDILAPYLDETELAWLKK 557
            G+ +D+LAR  LWKYGLDY HGTGHGVGS+LNVHE P  I  +    + P+ A M  ++EPG+YEDG+FG R+EN + +T+ NT+  F  + Y+  + +T AP+  K+I+   L+PEE+ +LN YHS     L+P L  +   WL K
Sbjct:  447 GYMIDVLARQYLWKYGLDYLHGTGHGVGSFLNVHELPVGIGSREVFNSAPLQAGMVTSNEPGFYEDGHFGYRVENCVYITEVNTENRFAGRTYLGLKDLTLAPHCQKLIDPSLLSPEEVKYLNEYHSEVYTTLSPMLSVSAKKWLSK 593          
BLAST of DR908493 vs. ExPASy Swiss-Prot
Match: XPP_YEAST (Putative Xaa-Pro aminopeptidase OS=Saccharomyces cerevisiae GN=YLL029W PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.329e-30
Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = 3
Query:  123 GHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPR--NVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYMSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSRCRDILAPYLDETELA--WLKK 557
            G  +D +AR  LW  GLDY+HGTGHG+GS+LNVHEGP  + F+P   N P+ A    ++EPGYY+DG +GIR+E+ +++  A  K NF     + FE++T  PY  K+IN K L  EE   +N YH+R    +  +L    ++  WLK+
Sbjct:  601 GFNIDAIARQFLWSRGLDYKHGTGHGIGSFLNVHEGPMGVGFRPHLMNFPLRAGNIISNEPGYYKDGEYGIRIESDMLIKKATEKGNF-----LKFENMTVVPYCRKLINTKLLNEEEKTQINEYHARVWRTIVHFLQPQSISYKWLKR 744          
BLAST of DR908493 vs. ExPASy Swiss-Prot
Match: XPP2_PIG (Xaa-Pro aminopeptidase 2 OS=Sus scrofa GN=XPNPEP2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.583e-29
Identity = 65/158 (41.14%), Postives = 100/158 (63.29%), Query Frame = 3
Query:  123 GHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYMSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSRCRDILAPYLDE----TELAWLKK---PLNLQA 575
            G  ++  AR  LW  GL+Y HGTGHG+G++L VHE P  + F+  N+P+   M  + EPGYY+DG FGIRLE+V +V +A TK+      Y++FE ++  PY  K+I++  L+PE++ +LN Y+   R+ + P L       EL+WL++   PL+ +A
Sbjct:  499 GRVVEAFARKALWDVGLNYGHGTGHGIGNFLCVHEWP--VGFQYGNIPMAEGMFTSIEPGYYQDGEFGIRLEDVALVVEAKTKY---PGTYLTFEVVSLVPYDRKLIDVSLLSPEQLQYLNRYYQAIREKVGPELQRRGLLEELSWLQRHTEPLSARA 651          
BLAST of DR908493 vs. ExPASy Swiss-Prot
Match: XPP2_HUMAN (Xaa-Pro aminopeptidase 2 OS=Homo sapiens GN=XPNPEP2 PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 2.345e-27
Identity = 63/160 (39.38%), Postives = 97/160 (60.62%), Query Frame = 3
Query:  123 GHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNFGDKGYMSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSRCRDILAPYLDETEL----AWLK---KPLNLQAHD 581
            G  ++  AR  LW  GL+Y HGTGHG+G++L VHE P  + F+  N+ +   M  + EPGYY+DG FGIRLE+V +V +A TK+      Y++FE +++ PY   +I++  L+PE + +LN Y+   R+ + P L   +L     WL+   +PL  +A D
Sbjct:  500 GRMVEAFARRALWDAGLNYGHGTGHGIGNFLCVHEWP--VGFQSNNIAMAKGMFTSIEPGYYKDGEFGIRLEDVALVVEAKTKY---PGSYLTFEVVSFVPYDRNLIDVSLLSPEHLQYLNRYYQTIREKVGPELQRRQLLEEFEWLQQHTEPLAARAPD 654          
The following BLAST results are available for this feature:
BLAST of DR908493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
XPP1_RAT1.976e-4255.41Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus GN=X... [more]
XPP1_MOUSE1.976e-4255.41Xaa-Pro aminopeptidase 1 OS=Mus musculus GN=Xpnpep... [more]
XPP1_BOVIN4.403e-4255.41Xaa-Pro aminopeptidase 1 OS=Bos taurus GN=XPNPEP1 ... [more]
XPP1_HUMAN9.809e-4255.41Xaa-Pro aminopeptidase 1 OS=Homo sapiens GN=XPNPEP... [more]
XPP1_DICDI7.274e-3749.36Xaa-Pro aminopeptidase 1 OS=Dictyostelium discoide... [more]
YAA1_SCHPO3.056e-3546.94Uncharacterized peptidase C22G7.01c OS=Schizosacch... [more]
XPP_YEAST1.329e-3043.62Putative Xaa-Pro aminopeptidase OS=Saccharomyces c... [more]
XPP2_PIG5.583e-2941.14Xaa-Pro aminopeptidase 2 OS=Sus scrofa GN=XPNPEP2 ... [more]
XPP2_HUMAN2.345e-2739.38Xaa-Pro aminopeptidase 2 OS=Homo sapiens GN=XPNPEP... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16621 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-21_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908493 ID=DR908493; Name=DR908493; organism=Citrus sinensis; type=EST; length=629bp
GTCAATAATTTCAGAGCCACATTGAAGTTACCTGAAAATGTCAAATCTGG
TTTGAAAGTCGATTGATTGATTGATTAACAATGCTTTATAGGTCTATTGA
TTGATTGAATAACATTGCTATAGGTCATACCCTGGACATTCTTGCTAGAC
TTCCTTTGTGGAAGTATGGTCTTGATTATCGACATGGAACTGGTCATGGA
GTTGGGTCTTACTTAAATGTCCATGAAGGACCCCAATCCATCAGTTTCAA
GCCTCGAAATGTGCCTATACATGCTTCCATGACTGCAACAGATGAACCTG
GTTACTACGAGGATGGCAACTTTGGTATAAGATTGGAGAATGTGCTTGTA
GTCACTGATGCCAATACAAAATTTAATTTCGGGGATAAGGGTTACATGTC
ATTTGAGCACATAACGTGGGCTCCATATCAGATAAAGATGATCAACCTGA
AGTCATTGACACCTGAAGAGATAGATTGGCTGAACGCCTACCATTCAAGA
TGTAGAGATATTCTAGCGCCATACTTGGATGAAACTGAGTTGGCATGGCT
GAAGAAGCCACTGAACCTGCAAGCGCATGATTGGTTTTGGTCCTTGGAGC
ATGGGGGTACTTCCCTTTGACTCCCTACT
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