DR908471

Overview
NameDR908471
Unique NameDR908471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3742 contig Csv1_Contig3742:889..1525. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_CITMA (Citrate synthase, mitochondrial OS=Citrus maxima GN=CIT PE=2 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 2.592e-98
Identity = 181/211 (85.78%), Postives = 182/211 (86.26%), Query Frame = 1
Query:    1 PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQDIILFFLEYQGVLESALS*YGTELLGCHL-RAKSVTLDWIEK 630
            PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSF AALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKL+EVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAE             L           LG  L R KSVTLDWIEK
Sbjct:  255 PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFLAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLYEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEK 465          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_DAUCA (Citrate synthase, mitochondrial OS=Daucus carota GN=CS PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 4.008e-91
Identity = 165/210 (78.57%), Postives = 174/210 (82.86%), Query Frame = 1
Query:    1 PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQDIILFFLEYQGVLESALS*YGTELLGCHL-RAKSVTLDWIE 627
            P M ELMRLYVTIH+DHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVV ECGENVT EQLKDY+WKTLNSGKVVPG+GHGVLR TDPRY CQREFALKHLPDDPLFQLVS LFEVVPPILT+LGKVKNPWPNVDAHSGVLLNH+GL E             +           LG  L R KSVT++W+E
Sbjct:  256 PSMQELMRLYVTIHTDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVSECGENVTKEQLKDYIWKTLNSGKVVPGYGHGVLRNTDPRYICQREFALKHLPDDPLFQLVSNLFEVVPPILTELGKVKNPWPNVDAHSGVLLNHYGLTEARYYTVLFGVSRAIGICSQLVWDRALGLPLERPKSVTMEWLE 465          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_FRAAN (Citrate synthase, mitochondrial OS=Fragaria ananassa GN=MCSI PE=1 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 6.837e-91
Identity = 172/214 (80.37%), Postives = 185/214 (86.45%), Query Frame = 1
Query:    4 KMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQDIILFFLEYQGVLESALS*YGTEL-----LGCHL-RAKSVTLDWIE 627
            KM ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDP+LSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGEN+T +QLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLF+LVSKL++VVPPILT+LGKVKNPWPNVDAHSGVLLNHFGL E     +F    GV  S     G++L     LG  L R KSVT++ +E
Sbjct:  253 KMQELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPFLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENITKDQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFRLVSKLYDVVPPILTELGKVKNPWPNVDAHSGVLLNHFGLTE---ARYFTVLFGVSRSI--GIGSQLIWDRALGLPLERPKSVTMESLE 461          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY4_ARATH (Citrate synthase 4, mitochondrial OS=Arabidopsis thaliana GN=CSY4 PE=1 SV=3)

HSP 1 Score: 328.561 bits (841), Expect = 1.684e-89
Identity = 160/209 (76.56%), Postives = 175/209 (83.73%), Query Frame = 1
Query:    4 KMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQDIILFFLEYQGVLESALS*YGTELLGCHL-RAKSVTLDWIE 627
            K+ ELMRLY+TIHSDHEGGNVSAHTGHLV SALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVV+ECGE+++ EQLK+YVWKTLNSGKV+PG+GHGVLR TDPRY CQREFALKHLPDDPLFQLVSKL+EVVPP+LT+LGKVKNPWPNVDAHSGVLLNH+GL E             L           LG  L R KSVT+DW+E
Sbjct:  257 KVKELMRLYITIHSDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVEECGEDISKEQLKEYVWKTLNSGKVIPGYGHGVLRNTDPRYVCQREFALKHLPDDPLFQLVSKLYEVVPPVLTELGKVKNPWPNVDAHSGVLLNHYGLTEARYYTVLFGVSRSLGICSQLIWDRALGLALERPKSVTMDWLE 465          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY5_ARATH (Citrate synthase 5, mitochondrial OS=Arabidopsis thaliana GN=CSY5 PE=1 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.092e-88
Identity = 161/210 (76.67%), Postives = 174/210 (82.86%), Query Frame = 1
Query:    1 PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQDIILFFLEYQGVLESALS*YGTELLGCHL-RAKSVTLDWIE 627
            P+M ELMRLYVTIHSDHEGGNVSAH GHLV SALSDPYLSFAAALNGLAGPLHGLANQEVLLWIK VV+ECGE+++ EQLKDYVWKTLNSGKVVPG+GHGVLRKTDPRY CQREFALKHLPDDPLFQLVSKL+EVVPPILT+LGKVKNPWPNVDAHSGVLLN++GL E             L           LG  L R KSV +DW++
Sbjct:  217 PQMKELMRLYVTIHSDHEGGNVSAHAGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKLVVEECGESISKEQLKDYVWKTLNSGKVVPGYGHGVLRKTDPRYICQREFALKHLPDDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNYYGLTEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVNMDWLD 426          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_IGUIG (Citrate synthase, mitochondrial OS=Iguana iguana GN=CS PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.020e-83
Identity = 122/170 (71.76%), Postives = 152/170 (89.41%), Query Frame = 1
Query:    1 PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            P+ +ELMRLY+TIHSDHEGGNVSAHT HLV SALSDPYL+FAAA+NGLAGPLHGLANQEVL+W+ ++  E GE+V+ ++L+D++W TLNSG+VVPG+GH VLRKTDPRYTCQREFALKHLP DPLF+LV++L+++VP +L + GK KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  252 PQFIELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLAFAAAMNGLAGPLHGLANQEVLVWLTNLQKELGEDVSDQKLRDFIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPKDPLFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMKEMN 421          

HSP 2 Score: 55.0694 bits (131), Expect = 4.020e-83
Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 3
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ SQLIW RALG PLE  K
Sbjct:  422 YYTVLFGVSRALGVLSQLIWSRALGFPLERPK 453          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_XENLA (Citrate synthase, mitochondrial OS=Xenopus laevis GN=cs PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.164e-82
Identity = 123/166 (74.10%), Postives = 148/166 (89.16%), Query Frame = 1
Query:   13 ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            ELMRLY+TIHSDHEGGNVSAHT HLV SALSDPYLSF+AA+NGLAGPLHGLANQEVL+W+ S+  + G  V+ E+L+DY+W TLNSG+VVPG+GH VLRKTDPRYTCQREFALKHLPDDP+F+LV++L+++VP IL + GK KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  255 ELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFSAAMNGLAGPLHGLANQEVLVWLTSLQKDLGGEVSDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPDDPMFKLVAQLYKIVPNILLEQGKAKNPWPNVDAHSGVLLQYYGMTEMN 420          

HSP 2 Score: 55.0694 bits (131), Expect = 1.164e-82
Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 3
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ SQLIW RALG PLE  K
Sbjct:  421 YYTVLFGVSRALGVLSQLIWSRALGFPLERPK 452          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_AMBCR (Citrate synthase, mitochondrial OS=Amblyrhynchus cristatus GN=CS PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.583e-82
Identity = 121/169 (71.60%), Postives = 151/169 (89.35%), Query Frame = 1
Query:    4 KMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            + +ELMRLY+TIHSDHEGGNVSAHT HLV SALSDPYL+FAAA+NGLAGPLHGLANQEVL+W+ ++  E GE+V+ ++L+D++W TLNSG+VVPG+GH VLRKTDPRYTCQREFALKHLP DPLF+LV++L+++VP +L + GK KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  253 QFIELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLAFAAAMNGLAGPLHGLANQEVLVWLTNLQKELGEDVSDQKLRDFIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPKDPLFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMKEMN 421          

HSP 2 Score: 55.0694 bits (131), Expect = 2.583e-82
Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 3
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ SQLIW RALG PLE  K
Sbjct:  422 YYTVLFGVSRALGVLSQLIWSRALGFPLERPK 453          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_MACFA (Citrate synthase, mitochondrial OS=Macaca fascicularis GN=CS PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 2.583e-82
Identity = 122/166 (73.49%), Postives = 149/166 (89.76%), Query Frame = 1
Query:   13 ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            ELMRLY+TIHSDHEGGNVSAHT HLV SALSDPYLSFAAA+NGLAGPLHGLANQEVL+W+  +  E G++V+ E+L+DY+W TLNSG+VVPG+GH VLRKTDPRYTCQREFALKHLP+DP+F+LV++L+++VP +L + GK KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  253 ELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLVWLTQLQKEVGKDVSDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMN 418          

HSP 2 Score: 53.9138 bits (128), Expect = 2.583e-82
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 3
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ +QLIW RALG PLE  K
Sbjct:  419 YYTVLFGVSRALGVLAQLIWSRALGFPLERPK 450          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_SOLTU (Citrate synthase, mitochondrial OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 7.577e-82
Identity = 154/205 (75.12%), Postives = 166/205 (80.98%), Query Frame = 1
Query:   16 LMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQDIILFFLEYQGVLESALS*YGTELLGCHL-RAKSVTLDWIE 627
            LMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVV+ECGEN++ EQLKDYVWKTLNSGKVVPGFGHGVLRKT PRYTCQREFA+KHLP+DPLFQLVSKL+EV    L  L K+K PWPNVDAHSGVLLN++GL E             L           LG  L R KSVT++W+E
Sbjct:  262 LMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVEECGENISKEQLKDYVWKTLNSGKVVPGFGHGVLRKTVPRYTCQREFAMKHLPEDPLFQLVSKLYEVFLLFLQNLAKLK-PWPNVDAHSGVLLNYYGLTEARYYTVLFGVSRALGICSQLIWDRALGLPLERPKSVTMEWLE 465          
The following BLAST results are available for this feature:
BLAST of DR908471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
CISY_CITMA2.592e-9885.78Citrate synthase, mitochondrial OS=Citrus maxima G... [more]
CISY_DAUCA4.008e-9178.57Citrate synthase, mitochondrial OS=Daucus carota G... [more]
CISY_FRAAN6.837e-9180.37Citrate synthase, mitochondrial OS=Fragaria ananas... [more]
CISY4_ARATH1.684e-8976.56Citrate synthase 4, mitochondrial OS=Arabidopsis t... [more]
CISY5_ARATH1.092e-8876.67Citrate synthase 5, mitochondrial OS=Arabidopsis t... [more]
CISY_IGUIG4.020e-8371.76Citrate synthase, mitochondrial OS=Iguana iguana G... [more]
CISY_XENLA1.164e-8274.10Citrate synthase, mitochondrial OS=Xenopus laevis ... [more]
CISY_AMBCR2.583e-8271.60Citrate synthase, mitochondrial OS=Amblyrhynchus c... [more]
CISY_MACFA2.583e-8273.49Citrate synthase, mitochondrial OS=Macaca fascicul... [more]
CISY_SOLTU7.577e-8275.12Citrate synthase, mitochondrial OS=Solanum tuberos... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16599 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-43_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908471 ID=DR908471; Name=DR908471; organism=Citrus sinensis; type=EST; length=634bp
CCTAAGATGCTAGAGCTTATGAGGCTTTATGTTACCATTCACAGTGACCA
CGAAGGTGGAAATGTCAGTGCTCACACCGGCCATCTAGTTGCAAGTGCAC
TTTCAGATCCTTATCTTTCTTTTGCTGCCGCATTAAATGGTTTAGCTGGA
CCACTCCATGGTTTGGCTAATCAGGAAGTTTTGCTTTGGATCAAATCTGT
GGTGGATGAGTGTGGTGAGAACGTAACAACGGAGCAGTTGAAAGATTATG
TCTGGAAAACATTGAATAGTGGCAAGGTTGTCCCTGGATTTGGTCATGGT
GTTTTGCGTAAAACTGATCCGAGATACACTTGTCAGAGGGAGTTTGCCTT
GAAGCATTTGCCTGATGATCCATTGTTCCAGCTGGTTTCTAAGCTGTTTG
AAGTGGTGCCCCCAATATTAACAAAACTAGGCAAGGTTAAAAACCCCTGG
CCAAATGTTGATGCTCACAGTGGGGTGCTGCTGAACCATTTTGGTTTGGC
TGAGCAAGATATTATACTGTTCTTTTTGGAGTATCAAGGAGTCTTGGAAT
CTGCTCTCAGTTGATATGGGACCGAGCTCTTGGGCTGCCACTTGAGAGCC
AAAAGTGTAACTTTAGATTGGATTGAGAAAATTG
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