DR908466

Overview
NameDR908466
Unique NameDR908466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8368 contig Csv1_Contig8368:381..1016. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.308e-38
Identity = 83/173 (47.98%), Postives = 120/173 (69.36%), Query Frame = 2
Query:   29 DDVFHSFNRVFVMGGPKKAPPIENRLPCTLEELYKGTTKKIKISREIV--DINGNTIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            +D+  +F  ++  G  K+ PPIE  L  +LE+L+ G TKKIKISR ++  D   +TIK ++ILT+DV+PGW++GTRITFE++G+   N+ PAD++FIV EK H  F R+ ++L     I LG+AL    V + TLD R LNIPI++++HP Y + VP EGMP+   PSK+G+L
Sbjct:  119 NDIDLNFGGLWGRGVQKQDPPIERDLYLSLEDLFFGCTKKIKISRRVLNEDRYSSTIK-DKILTIDVRPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDRLLNIPINDIVHPKYFKIVPGEGMPLPENPSKKGDL 290          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.770e-38
Identity = 80/160 (50.00%), Postives = 115/160 (71.88%), Query Frame = 2
Query:   68 GGPKKAPPIENRLPCTLEELYKGTTKKIKISREIVDING--NTIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            G  K+ P +E  L  +LE+L+ G TKKIKISR +++ +G  +TIK ++ILT+DVKPGW++GTRITFE++G+   N+ PAD++FIV EK H  F R+ ++L     I LG+AL    V + TLD R LNIPI+++IHP Y + VP EGMP+  +P+K+G+L
Sbjct:  132 GVKKQDPQVERDLYLSLEDLFFGCTKKIKISRRVLNEDGYSSTIK-DKILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDRLLNIPINDIIHPKYFKKVPGEGMPLPEDPTKKGDL 290          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 148.288 bits (373), Expect = 3.119e-35
Identity = 72/156 (46.15%), Postives = 109/156 (69.87%), Query Frame = 2
Query:   77 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            K+ PP+ + L  +LEE+Y G TKK+KIS + ++ +G +I+ E+ ILT++VK GWK+GT+ITF ++G+   N  PAD+VF++ +KPH++F RDG+D+I    I+L EAL G  V + TLDGR++ +   +VI P     VP EG+P+   P KRG+L
Sbjct:  159 KQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDL 314          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 4.074e-35
Identity = 72/156 (46.15%), Postives = 109/156 (69.87%), Query Frame = 2
Query:   77 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            K+ PP+ + L  +LEE+Y G TKK+KIS + ++ +G +I+ E+ ILT++VK GWK+GT+ITF ++G+   N  PAD+VF++ +KPH++F RDG+D+I    I+L EAL G  V + TLDGR++ +   +VI P     VP EG+P+   P KRG+L
Sbjct:  159 KQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDL 314          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 4.074e-35
Identity = 72/156 (46.15%), Postives = 109/156 (69.87%), Query Frame = 2
Query:   77 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            K+ PP+ + L  +LEE+Y G TKK+KIS + ++ +G +I+ E+ ILT++VK GWK+GT+ITF ++G+   N  PAD+VF++ +KPH++F RDG+D+I    I+L EAL G  V + TLDGR++ +   +VI P     VP EG+P+   P KRG+L
Sbjct:  159 KQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDL 314          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: PSI1_SCHPO (Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 5.506e-32
Identity = 68/163 (41.72%), Postives = 101/163 (61.96%), Query Frame = 2
Query:   68 GGPKKAPPIENR-----LPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            G     PP +N      L  +LE+L+ G TKK+KISR I+D +G ++K + IL + VKPGWK GT+I F  +G+ + +    D+ F++ EKPH VFTR G+DL +   ++L EAL G+  +++T+DG+ L +       P YE T P  GMP+   PS+RGN+
Sbjct:  194 GSRPSQPPAQNEVITRPLNVSLEDLFTGCTKKMKISRHIIDASGQSVKADRILEIKVKPGWKAGTKIKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDLRMQVELSLKEALLGFSKQISTIDGKKLKVSSSLPTQPGYEITYPGFGMPLPKNPSQRGNM 356          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.191e-32
Identity = 72/188 (38.30%), Postives = 119/188 (63.30%), Query Frame = 2
Query:   26 DDDVFHSFNRVFVMG---GPKKAP------------PIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            DDD F +F R    G   GP++AP            P+ + L  +LEE+Y G+TK++KI+R  ++ +G T++ E+ IL + +K GWK+GT+ITF ++G+   +  PAD+VF++ +KPH+ F RDG +++ +  I+L EAL G  V + T+DGR + +P ++VI P   + +  EG+P    P++RG+L
Sbjct:  134 DDDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDL 321          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.092e-31
Identity = 71/188 (37.77%), Postives = 119/188 (63.30%), Query Frame = 2
Query:   26 DDDVFHSFNRVFVMG---GPKKAP------------PIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            D+D F +F R    G   GP++AP            P+ + L  +LEE+Y G+TK++KI+R  ++ +G T++ E+ IL + +K GWK+GT+ITF ++G+   +  PAD+VF++ +KPH+ F RDG +++ +  I+L EAL G  V + T+DGR + +P ++VI P   + +  EG+P    P++RG+L
Sbjct:  134 DEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDL 321          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.092e-31
Identity = 71/188 (37.77%), Postives = 119/188 (63.30%), Query Frame = 2
Query:   26 DDDVFHSFNRVFVMG---GPKKAP------------PIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            D+D F +F R    G   GP++AP            P+ + L  +LEE+Y G+TK++KI+R  ++ +G T++ E+ IL + +K GWK+GT+ITF ++G+   +  PAD+VF++ +KPH+ F RDG +++ +  I+L EAL G  V + T+DGR + +P ++VI P   + +  EG+P    P++RG+L
Sbjct:  134 DEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDL 321          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.569e-31
Identity = 63/156 (40.38%), Postives = 105/156 (67.31%), Query Frame = 2
Query:   77 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            K+ PP+ + L  +LEE+Y G TK++KISR+ ++ +G + + E+ ILT+++K GWK+GT+ITF  +G+   N  PAD+VFI+ +K H  F RDG+++I T  I+L EAL G  + + TLDGR++ + +++++ P     +   G+P    P +RG+L
Sbjct:  155 KQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDL 310          
The following BLAST results are available for this feature:
BLAST of DR908466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
DJB13_MOUSE2.308e-3847.98DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
DJB13_HUMAN8.770e-3850.00DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]
DNJB1_HUMAN3.119e-3546.15DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNJB1_MOUSE4.074e-3546.15DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]
DNJB1_BOVIN4.074e-3546.15DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
PSI1_SCHPO5.506e-3241.72Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 ... [more]
DNJB5_BOVIN7.191e-3238.30DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB5_MOUSE2.092e-3137.77DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN2.092e-3137.77DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB4_PONAB3.569e-3140.38DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16594 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908466 ID=DR908466; Name=DR908466; organism=Citrus sinensis; type=EST; length=634bp
CAGTTCCTCAAATGAGACATTTGGTGATGATGATGTTTTTCATTCCTTTA
ATAGAGTATTTGTAATGGGTGGACCTAAGAAAGCACCTCCGATTGAGAAT
AGGCTGCCTTGTACCCTTGAGGAACTCTACAAGGGGACTACTAAGAAGAT
AAAGATCTCTAGGGAAATTGTTGACATCAATGGTAATACCATCAAGGTGG
AAGAAATTCTAACTGTTGATGTGAAGCCTGGATGGAAGAAGGGTACAAGG
ATCACCTTCGAAGAGAAGGGAAATGTGCAGCAAAATGTTAAGCCTGCAGA
CGTCGTCTTCATCGTGGACGAGAAGCCTCACAGTGTGTTTACTCGAGATG
GGAATGATTTGATCGTCACACGGACGATAACTCTCGGTGAGGCCTTGGAA
GGTTATCCGGTTCGTCTCACTACCCTGGATGGAAGGAGTTTAAACATCCC
AATCGACAATGTGATTCATCCCAACTATGAGGAGACTGTCCCGAGAGAGG
GGATGCCAATTCAGAACGAGCCATCAAAGAGAGGCAACTTGAAATCAAGT
TCAACATCAAGTTCCCACCAAGTTTGACTGCAGAGCAAAAGGCCGGGATC
AAGTTTTTACAGCTTTTAATCGATGCTTACCTTG
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