DR908453

Overview
NameDR908453
Unique NameDR908453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.773e-15
Identity = 41/68 (60.29%), Postives = 44/68 (64.71%), Query Frame = 1
Query:  427 KQYRGVRQRHWGKWVAEIRDPTK-ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQANLTT 627
            + YRGVRQR WGKW AEIRDP K ARVWLGTF+T             +F G  AKLNFPERVQ   TT
Sbjct:   37 RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTT 104          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.730e-15
Identity = 40/69 (57.97%), Postives = 46/69 (66.67%), Query Frame = 1
Query:  409 EGNVGIKQYRGVRQRHWGKWVAEIRDPTK-ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQ 612
            +G++  + YRGVRQR WGKW AEIRDP K ARVWLGTF+T             +F G  AKLNFPERVQ
Sbjct:   82 QGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQ 150          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.797e-14
Identity = 41/72 (56.94%), Postives = 46/72 (63.89%), Query Frame = 1
Query:  406 CEGNVGI---KQYRGVRQRHWGKWVAEIRDPTKA-RVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERV 609
            CE ++ +   K+YRGVRQR WGKW AEIRDP KA RVWLGTF+T             RF G  AKLNFPE V
Sbjct:   49 CESSMSLERPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENV 120          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.347e-14
Identity = 39/67 (58.21%), Postives = 42/67 (62.69%), Query Frame = 1
Query:  427 KQYRGVRQRHWGKWVAEIRDPTK-ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQANLT 624
            + YRGVRQR WGKW AEIRDP K ARVWLGTFDT              F G  AKLNFPE ++ N T
Sbjct:   68 RNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHIRVNPT 134          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.004e-14
Identity = 39/69 (56.52%), Postives = 44/69 (63.77%), Query Frame = 1
Query:  409 EGNVGIKQYRGVRQRHWGKWVAEIRDPTK-ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQ 612
            +G +  + YRGVRQR WGKW AEIRDP K ARVWLGTF+T             +F G  AKLNFPER Q
Sbjct:   84 QGLLRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQ 152          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.987e-13
Identity = 38/63 (60.32%), Postives = 42/63 (66.67%), Query Frame = 1
Query:  427 KQYRGVRQRHWGKWVAEIRDPTK-ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQ 612
            ++YRGVRQR WGKW AEIRDP + ARVWLGTFDT             RF G  AKLNFPE V+
Sbjct:   75 RRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVR 137          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.987e-13
Identity = 38/63 (60.32%), Postives = 41/63 (65.08%), Query Frame = 1
Query:  427 KQYRGVRQRHWGKWVAEIRDPTK-ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPERVQ 612
            ++YRGVRQR WGKW AEIRDP K ARVWLGTFD              RF G  AKLNFPE V+
Sbjct:  183 RRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENVK 245          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.349e-12
Identity = 34/59 (57.63%), Postives = 37/59 (62.71%), Query Frame = 1
Query:  430 QYRGVRQRHWGKWVAEIRDPTK-ARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPE 603
            QYRG+RQR WGKW AEIRDP K +R WLGTFDT             R  G  AK+NFPE
Sbjct:  127 QYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPE 185          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.349e-12
Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 1
Query:  427 KQYRGVRQRHWGKWVAEIRDP-TKARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPE 603
            K YRGVRQRHWGKWVAEIR P  + R+WLGTFDT             +  G  A+LNFPE
Sbjct:  185 KLYRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPE 244          
BLAST of DR908453 vs. ExPASy Swiss-Prot
Match: ERF54_ARATH (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana GN=ERF054 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.424e-11
Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = 1
Query:  418 VGIKQYRGVRQRHWGKWVAEIRDP-TKARVWLGTFDTXXXXXXXXXXXXXRFYGCNAKLNFPE 603
            +  K YRGVRQR WGKWVAEIR P ++AR+WLGTFDT             +  G +A LNFPE
Sbjct:  138 IATKLYRGVRQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFPE 200          
The following BLAST results are available for this feature:
BLAST of DR908453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
EF113_ARATH2.773e-1560.29Ethylene-responsive transcription factor ERF113 OS... [more]
EF114_ARATH4.730e-1557.97Ethylene-responsive transcription factor ERF114 OS... [more]
RAP26_ARATH1.797e-1456.94Ethylene-responsive transcription factor RAP2-6 OS... [more]
EF112_ARATH2.347e-1458.21Ethylene-responsive transcription factor ERF112 OS... [more]
EF115_ARATH4.004e-1456.52Ethylene-responsive transcription factor ERF115 OS... [more]
EF110_ARATH1.987e-1360.32Ethylene-responsive transcription factor ERF110 OS... [more]
ABR1_ARATH1.987e-1360.32Ethylene-responsive transcription factor ABR1 OS=A... [more]
RAP22_ARATH8.349e-1257.63Ethylene-responsive transcription factor RAP2-2 OS... [more]
ERF53_ARATH8.349e-1256.67Ethylene-responsive transcription factor ERF053 OS... [more]
ERF54_ARATH1.424e-1153.97Ethylene-responsive transcription factor ERF054 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16581 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-56_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908453 ID=DR908453; Name=DR908453; organism=Citrus sinensis; type=EST; length=638bp
GTGCACCGTCAATGCTTGTTGGCACCTCTGCCCCCACGAATCAGCCAGAC
TCTAGCCTAATGAATCTACCACAGTACAGCGGAATGGATCCCAGTAATAG
TACTTCCTCCCCAGTATCACAGTTTAGTGGAGCGCAACCACAGCTTGAGA
ATCAGTATAAACGTCTTCGGGTAGAATCACTGTCTACCATAGACTATACA
CCACATGCACTAGCTTCTGATAACCTGAATAGGAGTTCTCTGGCTACACA
GCATGGACCAGGTGTGGATCGCATTGGAGGGCAAACACAGTTTGGTCTTT
TAGCAGAGCTGATGGTGAATCATCAAATAGCAAGCAGGAGAATGATCGGA
GTTTTCTCCTATTGAGTTGTTTCTTTAATAAACACACTAAACATGTGCTA
TATACTGTGAAGGGAATGTGGGGATAAAGCAGTACAGAGGAGTGAGGCAA
AGGCACTGGGGCAAATGGGTAGCTGAGATTCGTGATCCAACGAAGGCTCG
TGTATGGCTAGGAACTTTTGATACAGCTGAAGCAGCAGCACTTGCTTACG
ATGAAGCAGCTCTTAGGTTCTACGGATGCAATGCCAAGCTTAACTTCCCA
GAAAGGGTTCAAGCTAATCTCACAACTCACCTTTCATT
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