DR908448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908448 vs. ExPASy Swiss-Prot
Match: EI2BG_DICDI (Translation initiation factor eIF-2B subunit gamma OS=Dictyostelium discoideum GN=eif2b3 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.413e-20 Identity = 62/204 (30.39%), Postives = 105/204 (51.47%), Query Frame = 1 Query: 25 DQKDK---FQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVI-GEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSXXXXXXXXXXXXXTIGDGCSIQGSVICSNAQLQ 624 DQK+K F +K+ ++PYL+ Q+ + P + N N +S + +++T F + L +A +T KC ++ YC+ +N+I+ + INRD+ G+ +L S +N I P+A + + T VGP C++G + +G KCSVK S+IG+HC+IG I D C I S+IC++ ++ Sbjct: 235 DQKEKYPLFFDIKKHLIPYLLSCQIPNIKRKRALPA---SAFNQNQTLSQTM--SSTTSPFDQFSEL----NAQKNKTIKCFAHLLKKEGYCMNVNTIKNYQQINRDIAKGDLQYLPNEPKSEKNFFIDPTANV-TITQVGPQCVIGTSTTLGAKCSVKFSIIGKHCKIGDGVRIENSIIMDHVIIEDRCVINSSIICNDVYIK 428
BLAST of DR908448 vs. ExPASy Swiss-Prot
Match: EI2BG_MACFA (Translation initiation factor eIF-2B subunit gamma OS=Macaca fascicularis GN=EIF2B3 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.643e-16 Identity = 63/215 (29.30%), Postives = 101/215 (46.98%), Query Frame = 1 Query: 16 EVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVS------YRILANASTPSFHELYAL-----GPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSXXXXXXXXXXXXXTIGDGCSIQGSVICSNAQLQE 627 + L + S++ +++PYLVR Q S + QGQ+ KE K Y L A+T + A G R +C V+I C R++++ +M+ NR V + L + ++H SA++ SK VG ++G +Q+G+K S+KRSVIG C I T+ +G +IQGSVIC+NA +++ Sbjct: 213 DFLMENGSITSIRSELIPYLVRKQFSSA----SSQQGQEEKEEDLKKKELKSLDIYSFLKEANTLNLAPYDACWNACRGDRWEDLPRSQVRCYVHIMKEG-LCSRVSTLGLYMEANRQVPKLLSALC-----PEEPLVHSSAQIVSKHLVGVDSLIGPETQIGEKSSIKRSVIGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSVICNNAVIEK 417
BLAST of DR908448 vs. ExPASy Swiss-Prot
Match: EI2BG_HUMAN (Translation initiation factor eIF-2B subunit gamma OS=Homo sapiens GN=EIF2B3 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.801e-15 Identity = 62/220 (28.18%), Postives = 102/220 (46.36%), Query Frame = 1 Query: 1 RSVLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVS------YRILANASTPSFHELYAL-----GPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSXXXXXXXXXXXXXTIGDGCSIQGSVICSNAQLQE 627 + + + L + S++ +++PYLVR Q S + QGQ+ KE K Y + A+T + A G R +C V+I C R++++ +M+ NR V + L + +H SA++ SK VG ++G +Q+G+K S+KRSVIG C I T+ +G +IQGSVIC+NA +++ Sbjct: 208 KKYIVDFLMENGSITSIRSELIPYLVRKQFSSA----SSQQGQEEKEEDLKKKELKSLDIYSFIKEANTLNLAPYDACWNACRGDRWEDLSRSQVRCYVHIMKEG-LCSRVSTLGLYMEANRQVPKLLSALC-----PEEPPVHSSAQIVSKHLVGVDSLIGPETQIGEKSSIKRSVIGSSCLIKDRVTITNCLLMNSVTVEEGSNIQGSVICNNAVIEK 417
BLAST of DR908448 vs. ExPASy Swiss-Prot
Match: EI2BG_RAT (Translation initiation factor eIF-2B subunit gamma OS=Rattus norvegicus GN=Eif2b3 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.239e-15 Identity = 60/214 (28.04%), Postives = 98/214 (45.79%), Query Frame = 1 Query: 16 EVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSA-----------PVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSXXXXXXXXXXXXXTIGDGCSIQGSVICSNAQLQ 624 + L + S++ +++PYLVR Q S + Q Q+ KE K + L S L P + R +C V+I C R++++ +M+ NR V + L + ++IHPSA++ +K +G ++G +Q+G+K S+KRSVIG C I T+ +G SI GSVIC+NA ++ Sbjct: 213 DFLMENKSITSIRSELIPYLVRKQFSSA----SSQQRQEDKEEDLKKKEPKSLDIYSFIKKDNTLTLAPYDACWNAFRRDKWEDLSRSQVRCYVHIMKEG-LCSRVSTLGLYMEANRQVPKLLSVLC-----PEESMIHPSAQIANKHLIGADSLIGSDTQVGEKSSIKRSVIGSSCVIRDRVTVTNCLLMNSVTVEEGSSIHGSVICNNAVVE 416
BLAST of DR908448 vs. ExPASy Swiss-Prot
Match: EI2BG_BOVIN (Translation initiation factor eIF-2B subunit gamma OS=Bos taurus GN=EIF2B3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.898e-14 Identity = 58/215 (26.98%), Postives = 101/215 (46.98%), Query Frame = 1 Query: 16 EVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRIL--------ANASTPSFHELY---ALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEANHLSGYNFSAQNNIIHPSAELGSKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSXXXXXXXXXXXXXTIGDGCSIQGSVICSNAQLQE 627 + L + S++ +++PYLVR Q S + QGQ+ KE K + L AN T + ++ G + R +C V+I C R++++ +M+ NR V + + ++IH SA++ SK VG ++G +Q+G+K S+K SVIG C I T+ +G +IQ S+IC++A +++ Sbjct: 214 DFLMENKSITSIRSELIPYLVRKQFSSA----SSQQGQEEKEEDLKKKELKSLDIYSFIKEANTLTLAPYDTCWNACRGDSWEGLSRSQVRCYVHIMKEG-LCSRVSTLGLYMEANRQVSKLLPVIC-----PEESLIHSSAQIVSKHMVGADSLIGPDTQVGEKSSIKHSVIGSSCVIRDRVTVTNCLLMNSVTVEEGSNIQSSIICNDAVIEK 418 The following BLAST results are available for this feature:
BLAST of DR908448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908448 ID=DR908448; Name=DR908448; organism=Citrus sinensis; type=EST; length=639bpback to top |