DR908440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908440 vs. ExPASy Swiss-Prot
Match: YJBQ_SALTY (UPF0047 protein yjbQ OS=Salmonella typhimurium GN=yjbQ PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.463e-28 Identity = 59/117 (50.43%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 76 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ 426 W Q+T+TL RG HLIT +I +++ L + GL HL LLHTSASLT+NEN D VR D E K VP+ +A ++H EG DDMP+HIKSS+ G +L +P+ G+L +GTWQ Sbjct: 2 WYQRTITLSEKPRGFHLITDEITDKLS-GLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQ 115 HSP 2 Score: 30.8018 bits (68), Expect = 4.463e-28 Identity = 13/22 (59.09%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 479 GIWLCEHRDAPTPRKVVITLNG 544 GIWL EHR PRK++ TL G Sbjct: 116 GIWLGEHRIHGGPRKIIATLQG 137
BLAST of DR908440 vs. ExPASy Swiss-Prot
Match: YJBQ_SALTI (UPF0047 protein yjbQ OS=Salmonella typhi GN=yjbQ PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.463e-28 Identity = 59/117 (50.43%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 76 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ 426 W Q+T+TL RG HLIT +I +++ L + GL HL LLHTSASLT+NEN D VR D E K VP+ +A ++H EG DDMP+HIKSS+ G +L +P+ G+L +GTWQ Sbjct: 2 WYQRTITLSEKPRGFHLITDEITDKLS-GLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQ 115 HSP 2 Score: 30.8018 bits (68), Expect = 4.463e-28 Identity = 13/22 (59.09%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 479 GIWLCEHRDAPTPRKVVITLNG 544 GIWL EHR PRK++ TL G Sbjct: 116 GIWLGEHRIHGGPRKIIATLQG 137
BLAST of DR908440 vs. ExPASy Swiss-Prot
Match: YE72_SCHPO (UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe GN=SPAC4A8.02c PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.442e-27 Identity = 59/117 (50.43%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 82 QKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQEL 432 Q+ +TL +G ++IT +VK++ + L F G + F+ HTSA+LTINEN+D+D R D L+KIVPE SA ++HT EG DDMPAH+KSS+ G +LT+PIT+G+L++GTWQ++ Sbjct: 5 QRIITLDRRSKGFYIITNDLVKKLPE-LKSFSSGTVNFFIQHTSAALTINENWDADTRADMNDILDKIVPE--SAGYRHTAEGLDDMPAHVKSSLIGPSLTVPITNGKLSLGTWQDI 118
BLAST of DR908440 vs. ExPASy Swiss-Prot
Match: YJBQ_ECOLI (UPF0047 protein yjbQ OS=Escherichia coli (strain K12) GN=yjbQ PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.829e-27 Identity = 58/117 (49.57%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 76 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ 426 W QKT+TL RG HL+T +I+ ++A D+ GL HL L HTSASLT+NEN D VR D E F + VP+ + ++H EG DDMP+HIKSSM G +L +P+ G++ GTWQ Sbjct: 2 WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGN--YEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQ 115 HSP 2 Score: 26.5646 bits (57), Expect = 2.829e-27 Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 479 GIWLCEHRDAPTPRKVVITLNG 544 GIWL EHR R+++ TL G Sbjct: 116 GIWLGEHRIHGGSRRIIATLQG 137
BLAST of DR908440 vs. ExPASy Swiss-Prot
Match: YJBQ_ECO57 (UPF0047 protein yjbQ OS=Escherichia coli O157:H7 GN=yjbQ PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.829e-27 Identity = 58/117 (49.57%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 76 WAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ 426 W QKT+TL RG HL+T +I+ ++A D+ GL HL L HTSASLT+NEN D VR D E F + VP+ + ++H EG DDMP+HIKSSM G +L +P+ G++ GTWQ Sbjct: 2 WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGN--YEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQ 115 HSP 2 Score: 26.5646 bits (57), Expect = 2.829e-27 Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 479 GIWLCEHRDAPTPRKVVITLNG 544 GIWL EHR R+++ TL G Sbjct: 116 GIWLGEHRIHGGSRRIIATLQG 137
BLAST of DR908440 vs. ExPASy Swiss-Prot
Match: Y1880_SYNY3 (UPF0047 protein sll1880 OS=Synechocystis sp. (strain PCC 6803) GN=sll1880 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.658e-15 Identity = 49/119 (41.18%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 73 RWAQKTVTLPPLRRGCHLITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPE-GRSAPWKHTLEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ 426 R Q+ + + + H KI + S K GL +F+ HTSASL I EN D DV D F ++VPE GR ++H+ EG DDMPAHI+S++ + IPI +G+L +GTWQ Sbjct: 9 RQHQEILVIATQGKSLHNFNSKIQAVVQH--SGVKTGLCTVFVRHTSASLIIQENADPDVLTDLAIFFAQLVPEDGRR--YRHSTEGLDDMPAHIRSALTKTSEHIPIVNGRLGLGTWQ 123
BLAST of DR908440 vs. ExPASy Swiss-Prot
Match: Y1081_METJA (UPF0047 protein MJ1081 OS=Methanocaldococcus jannaschii GN=MJ1081 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.815e-14 Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 1 Query: 127 ITPKIVKEIAQDLSEFKCGLAHLFLLHTSASLTINENYDSDVRDDTETFLNKIVPEGRSAPWKHT-LEGPDDMPAHIKSSMFGCTLTIPITDGQLNMGTWQ 426 ITP I+ I++ S+ K G+A +++ HT+A +TINEN D V+ D FL+ ++P+ W T LEG D AHIKSS+ GC+ TI I DG+ +GTWQ Sbjct: 23 ITPYIISAISE--SKVKDGIAVIYVPHTTAGITINENADPSVKHDIINFLSHLIPKN----WNFTHLEGNSD--AHIKSSLVGCSQTIIIKDGKPLLGTWQ 115 The following BLAST results are available for this feature:
BLAST of DR908440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908440 ID=DR908440; Name=DR908440; organism=Citrus sinensis; type=EST; length=640bpback to top |