DR908413

Overview
NameDR908413
Unique NameDR908413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908413 vs. ExPASy Swiss-Prot
Match: FH3_ORYSJ (Formin-like protein 3 OS=Oryza sativa subsp. japonica GN=FH3 PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 1.999e-61
Identity = 116/136 (85.29%), Postives = 129/136 (94.85%), Query Frame = 3
Query:    3 LMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISLGFQKALKNFLDTAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKLFKKSREENER 410
            LMHYLCKLL+EK+PELLDFDKDL+HLEAASKIQLK LAEEMQA++KGLEKVEQEL AS NDGAIS+GF++ALK+FLD AEAEVRSLISLYSEVGRNADSL+QYFGEDPARCPFEQVT ILV+FV +FKKSR+EN R
Sbjct: 1074 LMHYLCKLLSEKLPELLDFDKDLIHLEAASKIQLKLLAEEMQAINKGLEKVEQELAASVNDGAISVGFREALKSFLDAAEAEVRSLISLYSEVGRNADSLAQYFGEDPARCPFEQVTSILVIFVNMFKKSRDENAR 1209          
BLAST of DR908413 vs. ExPASy Swiss-Prot
Match: FH14_ARATH (Formin-like protein 14 OS=Arabidopsis thaliana GN=FH14 PE=2 SV=3)

HSP 1 Score: 221.861 bits (564), Expect = 2.287e-57
Identity = 111/137 (81.02%), Postives = 122/137 (89.05%), Query Frame = 3
Query:    3 LMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISLGFQKALKNFLDTAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKLFKKSREENERQ 413
            LMHYLCKL+ EKMPELLDF  DLVHLEAASKI+LK LAEEMQA +KGLEKVEQEL ASENDGAISLGF+K LK FLD A+ EV++L SLYSEVGRNADSLS YFGEDPARCPFEQVT+IL +F+K F KSREENE+Q
Sbjct: 1055 LMHYLCKLVGEKMPELLDFANDLVHLEAASKIELKTLAEEMQAATKGLEKVEQELMASENDGAISLGFRKVLKEFLDMADEEVKTLASLYSEVGRNADSLSHYFGEDPARCPFEQVTKILTLFMKTFIKSREENEKQ 1191          
BLAST of DR908413 vs. ExPASy Swiss-Prot
Match: FH6_ORYSJ (Formin-like protein 6 OS=Oryza sativa subsp. japonica GN=FH6 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 5.647e-48
Identity = 97/137 (70.80%), Postives = 114/137 (83.21%), Query Frame = 3
Query:    3 LMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISLGFQKALKNFLDTAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKLFKKSREENERQ 413
            LMHYL K+L+EK+PELLDF KDL  LE A+K+QLK+LAEEMQA++KGLEKVEQELT SENDG +S  F+K LK+FL  AEAEVRSL SLYS VGRNAD+L+ YFGEDPARCPFEQV   L  FV+LF +S +EN +Q
Sbjct: 1170 LMHYLSKVLSEKLPELLDFPKDLASLELAAKVQLKSLAEEMQAINKGLEKVEQELTTSENDGPVSEIFRKTLKDFLSGAEAEVRSLTSLYSNVGRNADALALYFGEDPARCPFEQVVITLQNFVRLFVRSHDENCKQ 1306          
BLAST of DR908413 vs. ExPASy Swiss-Prot
Match: FH13_ARATH (Formin-like protein 13 OS=Arabidopsis thaliana GN=FH13 PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.391e-46
Identity = 95/137 (69.34%), Postives = 109/137 (79.56%), Query Frame = 3
Query:    3 LMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISLGFQKALKNFLDTAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKLFKKSREENERQ 413
            LMHYLCK+LAEK+PE+LDF K+L  LE A+KIQLK LAEEMQA++KGLEKV QEL+ SENDG IS  F K LK FL  AEAEVRSL SLYS VGRN D L  YFGEDPA+CPFEQV   L+ FV+LF ++ EEN +Q
Sbjct: 1074 LMHYLCKILAEKIPEVLDFTKELSSLEPATKIQLKFLAEEMQAINKGLEKVVQELSLSENDGPISHNFNKILKEFLHYAEAEVRSLASLYSGVGRNVDGLILYFGEDPAKCPFEQVVSTLLNFVRLFNRAHEENGKQ 1210          
BLAST of DR908413 vs. ExPASy Swiss-Prot
Match: FH18_ARATH (Formin-like protein 18 OS=Arabidopsis thaliana GN=FH18 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.538e-45
Identity = 96/137 (70.07%), Postives = 109/137 (79.56%), Query Frame = 3
Query:    3 LMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISLGFQKALKNFLDTAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKLFKKSREENERQ 413
            LMHYLCK+LAEK+PELL+F KDLV LEAA+KIQLK LAEEMQA+SKGLEKV QE TASE DG IS  F+  LK FL  AE EVRSL SLYS VG +AD+L+ YFGEDPAR PFEQV   L  FV++F +S EEN +Q
Sbjct:  950 LMHYLCKVLAEKLPELLNFPKDLVSLEAATKIQLKYLAEEMQAISKGLEKVVQEFTASETDGQISKHFRMNLKEFLSVAEGEVRSLASLYSTVGGSADALALYFGEDPARVPFEQVVSTLQNFVRIFVRSHEENCKQ 1086          
BLAST of DR908413 vs. ExPASy Swiss-Prot
Match: FH20_ARATH (Formin-like protein 20 OS=Arabidopsis thaliana GN=FH20 PE=2 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 7.632e-45
Identity = 91/137 (66.42%), Postives = 110/137 (80.29%), Query Frame = 3
Query:    3 LMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISLGFQKALKNFLDTAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKLFKKSREENERQ 413
            LMHYLCK+LA K   LLDF KDL  LE+ASKIQLK+LAEEMQA+ KGLEK+ QELTASE+DG +S  F+K L +F+  AE EV ++ SLYS VGRNAD+L+ YFGEDP RCPFEQVT  L+ F++LFKK+ EEN +Q
Sbjct: 1449 LMHYLCKVLASKASVLLDFPKDLESLESASKIQLKSLAEEMQAIIKGLEKLNQELTASESDGPVSDVFRKTLGDFISVAETEVATVSSLYSVVGRNADALAHYFGEDPNRCPFEQVTATLLNFIRLFKKAHEENVKQ 1585          
BLAST of DR908413 vs. ExPASy Swiss-Prot
Match: FH12_ORYSJ (Formin-like protein 12 OS=Oryza sativa subsp. japonica GN=FH12 PE=3 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 9.967e-45
Identity = 90/137 (65.69%), Postives = 113/137 (82.48%), Query Frame = 3
Query:    3 LMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISLGFQKALKNFLDTAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKLFKKSREENERQ 413
            LMH+LCK LA+K P LLDF ++ V+LEAASK+QLKALAEE QAV KGL+KVEQEL ASE+DG +S  F+K LK F D + A+VRSL +LY+EVG++AD+L+ YFGEDPA+CPFEQVT  L+ FV LF+K+ EEN +Q
Sbjct: 1494 LMHFLCKGLADKSPHLLDFYEEFVNLEAASKLQLKALAEEQQAVVKGLQKVEQELAASESDGPVSEVFRKTLKEFTDASGADVRSLSALYAEVGKSADALAYYFGEDPAKCPFEQVTSTLLNFVGLFRKAHEENIKQ 1630          
BLAST of DR908413 vs. ExPASy Swiss-Prot
Match: FH7_ORYSJ (Formin-like protein 7 OS=Oryza sativa subsp. japonica GN=FH7 PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.302e-44
Identity = 91/137 (66.42%), Postives = 108/137 (78.83%), Query Frame = 3
Query:    3 LMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISLGFQKALKNFLDTAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKLFKKSREENERQ 413
            LMHYLCK+L++K+PE+LDF+KDL +LE ASKIQLK LAEEMQA++KGLEKVEQELT SE DG  S  F K LK FL  A+AE RSL  LYS  G++ADSL+ YFGEDP RCPFEQV   L+ FVK F+++  EN RQ
Sbjct: 1220 LMHYLCKVLSDKLPEVLDFNKDLTYLEPASKIQLKELAEEMQAITKGLEKVEQELTTSEKDGPGSEIFYKKLKEFLADAQAEGRSLAFLYSTAGKSADSLAHYFGEDPVRCPFEQVVSTLLSFVKTFERAHAENLRQ 1356          
BLAST of DR908413 vs. ExPASy Swiss-Prot
Match: FH5_ORYSJ (Formin-like protein 5 OS=Oryza sativa subsp. japonica GN=FH5 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 3.206e-43
Identity = 89/137 (64.96%), Postives = 107/137 (78.10%), Query Frame = 3
Query:    3 LMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISLGFQKALKNFLDTAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKLFKKSREENERQ 413
            LMHYLCK+LA K  +LLDF  DLV LEA SKIQLK LAEEMQAVSKGLEKV+ E  ASE+DG +S  F++ LK F D A A+V+SL SL+SEVG+ AD+L +YFGEDP RCPFEQV   L+ FV +F+K+ EEN +Q
Sbjct: 1436 LMHYLCKVLAAKSSQLLDFYMDLVSLEATSKIQLKMLAEEMQAVSKGLEKVQLEYNASESDGPVSEIFREKLKEFTDNAGADVQSLSSLFSEVGKKADALIKYFGEDPVRCPFEQVISTLLTFVTMFRKAHEENRKQ 1572          
BLAST of DR908413 vs. ExPASy Swiss-Prot
Match: FH17_ARATH (Formin-like protein 17 OS=Arabidopsis thaliana GN=FH17 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.078e-42
Identity = 92/137 (67.15%), Postives = 104/137 (75.91%), Query Frame = 3
Query:    3 LMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISLGFQKALKNFLDTAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKLFKKSREENERQ 413
            LMHYLCK+LAEK+P LL+F KD+V LEAA+ IQLK LAEEMQA SKGLEKV QE TASE D  IS  F   LK FL  AE EVRSL SLYS VG +AD+L+ YFGEDPAR PFEQV   L  FV++F +S EEN +Q
Sbjct:  334 LMHYLCKVLAEKLPGLLNFPKDMVSLEAATNIQLKYLAEEMQATSKGLEKVVQEFTASETDCQISKHFHMNLKEFLSVAEGEVRSLASLYSTVGGSADALALYFGEDPARVPFEQVVSTLQNFVRIFVRSHEENCKQ 470          
The following BLAST results are available for this feature:
BLAST of DR908413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
FH3_ORYSJ1.999e-6185.29Formin-like protein 3 OS=Oryza sativa subsp. japon... [more]
FH14_ARATH2.287e-5781.02Formin-like protein 14 OS=Arabidopsis thaliana GN=... [more]
FH6_ORYSJ5.647e-4870.80Formin-like protein 6 OS=Oryza sativa subsp. japon... [more]
FH13_ARATH1.391e-4669.34Formin-like protein 13 OS=Arabidopsis thaliana GN=... [more]
FH18_ARATH1.538e-4570.07Formin-like protein 18 OS=Arabidopsis thaliana GN=... [more]
FH20_ARATH7.632e-4566.42Formin-like protein 20 OS=Arabidopsis thaliana GN=... [more]
FH12_ORYSJ9.967e-4565.69Formin-like protein 12 OS=Oryza sativa subsp. japo... [more]
FH7_ORYSJ1.302e-4466.42Formin-like protein 7 OS=Oryza sativa subsp. japon... [more]
FH5_ORYSJ3.206e-4364.96Formin-like protein 5 OS=Oryza sativa subsp. japon... [more]
FH17_ARATH2.078e-4267.15Formin-like protein 17 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16541 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-24_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908413 ID=DR908413; Name=DR908413; organism=Citrus sinensis; type=EST; length=646bp
CTTTAATGCATTATTTGTGCAAGCTTCTTGCTGAGAAAATGCCAGAGTTG
CTTGATTTTGACAAGGATCTTGTTCATTTGGAAGCTGCCTCAAAGATTCA
ATTAAAAGCTCTGGCTGAAGAAATGCAAGCTGTAAGTAAAGGTCTTGAAA
AGGTTGAGCAAGAACTAACGGCTTCAGAAAATGATGGTGCTATTTCTTTG
GGCTTCCAAAAGGCGCTGAAGAATTTCCTTGATACTGCTGAAGCTGAAGT
GAGGTCACTTATCTCTTTATATTCTGAAGTGGGGAGAAATGCAGATTCAT
TGTCCCAGTATTTTGGGGAGGATCCAGCTCGTTGTCCCTTTGAGCAAGTG
ACGCAAATTTTGGTCGTTTTCGTGAAGCTGTTCAAGAAATCACGGGAAGA
GAATGAAAGACAGGCTGATGCAGAGAAGAAGAAACTTGAGAAAGAAGCCA
TGAAGGAACGGGCAGCAGCTAATTCATCTGTAAAGATTGATATTGTCAAA
TCACAGCTTAATTTTCAAATCCAGAAGTAAACTCTTAATCAACATCAAAG
AATGTCTTGATACACTGGGTATATACCTACAGGCGATGTGGAATGAGGAT
TCATTTTGTCGACTATACTCCCAAAATTGTGGGCTAACTTCAAGCT
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