DR908401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908401 vs. ExPASy Swiss-Prot
Match: PSF1_DICDI (Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum GN=gins1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.491e-13 Identity = 51/157 (32.48%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 180 MHGRLGSRLVKELASGEKGQLTHFNDELLNEVIKECSENFLAL-QSLIRKMQEEGLDFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKVDLNLNVDMVPPKDPYIKGR 647 M + L+KEL + + H+ND + I E +AL + LI+ + E + H A+ H S+ R+KRC++AY+ R I+ W+ G L LP++++E+LS E +F + L Y SKV L+L +D PPK+ YI+ R Sbjct: 1 MFTKTAIELIKELRGTDS--IPHYNDTSIKATIDE----MIALYEDLIKTITEHKEQKKEPFYLQH--AITFHNSINRDKRCILAYLNERLNRIKEYRWSSGQSL--LPDQLKERLSQNEIQFFSEYDKILTEYNSKVGLDLTIDPQPPKELYIEVR 147
BLAST of DR908401 vs. ExPASy Swiss-Prot
Match: PSF1_BOVIN (DNA replication complex GINS protein PSF1 OS=Bos taurus GN=GINS1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.016e-12 Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 204 LVKELASGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGAL-INHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKV----DLNLNVDMVPPKDPYIKGR 647 LV+EL +G+L FN++ L +V++E +++L + Q + + +++ D + H SL+RN+RC +AY+Y+R I+ L W G LP ++ +S E D+F R+ +L +YM + L++ DM PPK YI+ R Sbjct: 9 LVRELHRAAEGRLPAFNEDGLRQVLEE-------MKALYEQNQSDVNEAKSSGRGDLIPTIKFRHCSLLRNQRCTVAYLYDRLLRIRALRWEYG---SVLPSALRFHMSAEEMDWFNRYKKSLATYMRSLGGDEGLDITQDMKPPKSLYIEVR 151
BLAST of DR908401 vs. ExPASy Swiss-Prot
Match: PSF1_HUMAN (DNA replication complex GINS protein PSF1 OS=Homo sapiens GN=GINS1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11 Identity = 45/153 (29.41%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 204 LVKELASGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGLDFQTTRNADHYGAL-INHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKV----DLNLNVDMVPPKDPYIKGR 647 L++EL +GQL FN++ L +V++E +++L + Q + + ++ +D + H SL+RN+RC +AY+Y+R I+ L W G LP ++ ++ E ++F + +L +YM + L++ DM PPK YI+ R Sbjct: 9 LIRELHRAPEGQLPAFNEDGLRQVLEE-------MKALYEQNQSDVNEAKSGGRSDLIPTIKFRHCSLLRNRRCTVAYLYDRLLRIRALRWEYG---SVLPNALRFHMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVR 151
BLAST of DR908401 vs. ExPASy Swiss-Prot
Match: PSF1_MOUSE (DNA replication complex GINS protein PSF1 OS=Mus musculus GN=Gins1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11 Identity = 47/153 (30.72%), Postives = 78/153 (50.98%), Query Frame = 3 Query: 204 LVKELASGEKGQLTHFNDELLNEVIKECSENFLALQSLIRKMQEEGL-DFQTTRNADHYGALINHLSLIRNKRCLMAYVYNRAEMIQNLAWTVGLRLFELPEEIQEKLSHLEKDYFKRHSAALESYMSKV----DLNLNVDMVPPKDPYIKGR 647 LV+EL +GQL FN++ L +V++E + QS + + + G D T H +L+RN+RC +AY+Y+R I+ L W G LP ++ +S E ++F + +L +YM + L++ D+ PPK YI+ R Sbjct: 9 LVRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSAGRGDLIPT-------VKFRHCALLRNRRCTIAYLYDRLLRIRALRWEYG---SVLPNSLRFHMSAEETEWFNHYKKSLATYMRSLGGDEGLDITQDVKPPKSLYIEVR 151 The following BLAST results are available for this feature:
BLAST of DR908401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908401 ID=DR908401; Name=DR908401; organism=Citrus sinensis; type=EST; length=648bpback to top |