DR908399

Overview
NameDR908399
Unique NameDR908399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6348 contig Csv1_Contig6348:1..652. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908399 vs. ExPASy Swiss-Prot
Match: C97B2_SOYBN (Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.790e-27
Identity = 63/157 (40.13%), Postives = 88/157 (56.05%), Query Frame = 2
Query:   26 FSMAQNVSKYVLQDCNSLMKAQEEIDRVLQGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYK-------VNAGQDIMISVYNIHHSSQVWERAEEFLPERF-------DLEG------------PMPNETNTDFRFIPFSGG 418
            F +AQN SK        + KAQ E+D VL     +FE +K+L+++   + E++RLYP PP+LIRR+   DVLPG +K       + AG D+ ISVYN+H S   W+R ++F PERF       ++EG              PNE  +DF F+PF GG
Sbjct:  367 FLLAQNPSK--------MKKAQAEVDLVLGTGRPTFESLKELQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGHKGEKDGYAIPAGTDVFISVYNLHRSPYFWDRPDDFEPERFLVQNKNEEIEGWAGLDPSRSPGALYPNEVISDFAFLPFGGG 515          

HSP 2 Score: 30.4166 bits (67), Expect = 1.790e-27
Identity = 16/42 (38.10%), Postives = 21/42 (50.00%), Query Frame = 1
Query:  418 PRKCVGDQFXXXXXXXXXXXXXQNMNFELV-PDQNINMTTGA 540
            PRKCVGDQF             QN + EL    +++ + TGA
Sbjct:  516 PRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGA 557          

HSP 3 Score: 24.2534 bits (51), Expect = 1.790e-27
Identity = 8/16 (50.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  537 STIHTTNGLYMKLRQR 584
            +TIHT NG++ +L++R
Sbjct:  557 ATIHTKNGMWCRLKKR 572          
BLAST of DR908399 vs. ExPASy Swiss-Prot
Match: C97B1_PEA (Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.155e-23
Identity = 62/157 (39.49%), Postives = 85/157 (54.14%), Query Frame = 2
Query:   26 FSMAQNVSKYVLQDCNSLMKAQEEIDRVLQGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYK-------VNAGQDIMISVYNIHHSSQVWERAEEFLPERF-------DLEG------------PMPNETNTDFRFIPFSGG 418
            F +AQN  K        + KAQ E+D VL     +FE +K L+++   + E++RLYP PP+LIRR+   DVLPG +K       + AG D+ ISVYN+H S   W+R  +F PERF       ++EG              PNE  +DF F+PF GG
Sbjct:  376 FLLAQNPDK--------MKKAQAEVDLVLGMGKPTFELLKKLEYIRLIVVETLRLYPQPPLLIRRSLKPDVLPGGHKGDKDGYTIPAGTDVFISVYNLHRSPYFWDRPNDFEPERFLVQNNNEEVEGWAGFDPSRSPGALYPNEIISDFAFLPFGGG 524          

HSP 2 Score: 25.0238 bits (53), Expect = 8.155e-23
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 1
Query:  418 PRKCVGDQF 444
            PRKCVGDQF
Sbjct:  525 PRKCVGDQF 533          
BLAST of DR908399 vs. ExPASy Swiss-Prot
Match: C97B3_ARATH (Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CYP97B3 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 4.940e-21
Identity = 55/145 (37.93%), Postives = 74/145 (51.03%), Query Frame = 2
Query:   62 QDCNSLMKAQEEIDRVLQGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPG-------NYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERF-------DLEG------------PMPNETNTDFRFIPFSGG 418
            Q+   + KAQ EID VL     ++E +K L+++   + E +RL+P PP+LIRR    + LPG        +KV  G DI ISVYN+H S   W+   +F PERF        +EG              PNE   DF F+PF GG
Sbjct:  377 QNPEKIRKAQAEIDAVLGQGPPTYESMKKLEYIRLIVVEVLRLFPQPPLLIRRTLKPETLPGGHKGEKEGHKVPKGTDIFISVYNLHRSPYFWDNPHDFEPERFLRTKESNGIEGWAGFDPSRSPGALYPNEIIADFAFLPFGGG 521          

HSP 2 Score: 25.7942 bits (55), Expect = 4.940e-21
Identity = 13/42 (30.95%), Postives = 20/42 (47.62%), Query Frame = 1
Query:  418 PRKCVGDQFXXXXXXXXXXXXXQNMNFEL-VPDQNINMTTGA 540
            PRKC+GDQF             Q  + EL    +++ + +GA
Sbjct:  522 PRKCIGDQFALMESTVALAMLFQKFDVELRGTPESVELVSGA 563          

HSP 3 Score: 23.483 bits (49), Expect = 4.940e-21
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  537 STIHTTNGLYMKLRQR 584
            +TIH  NG++ KL++R
Sbjct:  563 ATIHAKNGMWCKLKRR 578          
BLAST of DR908399 vs. ExPASy Swiss-Prot
Match: CYPE_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 2 OS=Bacillus subtilis GN=cypE PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.189e-14
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 2
Query:   77 LMKAQEEIDRVLQGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVW-ERAEEFLPERFDLEGPMPNETNTDFRFIPFSGG 418
            L KAQEE DRVL   +  ++ I+ LK++   +NE++RLYP  P     A+ D VL G Y ++ GQ + + +  +H     W   AE+F PERF+    +P+       + PF  G
Sbjct:  290 LKKAQEEADRVLTDDTPEYKQIQQLKYIRMVLNETLRLYPTAPAFSLYAKEDTVLGGEYPISKGQPVTVLIPKLHRDQNAWGPDAEDFRPERFEDPSSIPHHA-----YKPFGNG 399          
BLAST of DR908399 vs. ExPASy Swiss-Prot
Match: CP4F5_RAT (Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13
Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 2
Query:   83 KAQEEIDRVLQGRSAS---FEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGG 418
            + ++E+  +L+ R      ++D+  L FLT CI ES+RL+P    L+RR   D VLP    +  G   +IS++ IHH+  VW   E F P RFD E     +  +   FIPFS G
Sbjct:  355 RCRQEVWELLRDREPEEIEWDDLAQLPFLTMCIKESLRLHPPAIDLLRRCTQDIVLPDGRVIPKGNICVISIFGIHHNPSVWPDPEVFDPFRFDSEN---RQKRSPLSFIPFSAG 466          
BLAST of DR908399 vs. ExPASy Swiss-Prot
Match: CPXB_BACME (Bifunctional P-450/NADPH-P450 reductase OS=Bacillus megaterium GN=CYP102A1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13
Identity = 40/123 (32.52%), Postives = 66/123 (53.66%), Query Frame = 2
Query:   53 YVLQDCNSLMKAQEEIDRVLQGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVW-ERAEEFLPERFDLEGPMPNETNTDFRFIPFSGG 418
            +++++ + L KA EE  RVL     S++ +K LK++   +NE++RL+P  P     A+ D VL G Y +  G ++M+ +  +H    +W +  EEF PERF+    +P        F PF  G
Sbjct:  280 FLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA-----FKPFGNG 397          
BLAST of DR908399 vs. ExPASy Swiss-Prot
Match: CP4F6_RAT (Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13
Identity = 44/117 (37.61%), Postives = 64/117 (54.70%), Query Frame = 2
Query:   83 KAQEEIDRVLQGRSAS---FEDIKDLKFLTRCINESMRLYPHPPVLI--RRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGG 418
            + ++E+  +L+ R      ++D+  L FLT CI ES+RL  HPPVL+  R    D VLP    +  G   +IS++ +HH+  VW   E + P RFD E P   +  +   FIPFS G
Sbjct:  353 RCRQEVRELLRDREPEEIEWDDLAQLPFLTMCIKESLRL--HPPVLLISRCCSQDIVLPDGRVIPKGNICVISIFGVHHNPSVWPDPEVYNPFRFDPENP---QKRSPLAFIPFSAG 464          
BLAST of DR908399 vs. ExPASy Swiss-Prot
Match: CP4AP_PIG (Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.604e-13
Identity = 40/113 (35.40%), Postives = 59/113 (52.21%), Query Frame = 2
Query:   83 KAQEEIDRVL-QGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGG 418
            + +EEI  +L  G S +++ +  + + T CI E++RLYP  P + R        P    + AG  + +SVY++HH+ QVW   EEF P RF      P        F+PFSGG
Sbjct:  340 RCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGIILSLSVYSLHHNPQVWPNPEEFDPSRF-----APGSARHSHAFMPFSGG 447          
BLAST of DR908399 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.604e-13
Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 2
Query:   83 KAQEEIDRVL-QGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGG 418
            + +EEI  +L  G S +++ +  + + T CI E++RLYP  P + R        P    + AG  + +S+Y +HH+ QVW   EEF P RF      P        F+PFSGG
Sbjct:  340 RCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVWPNPEEFDPSRF-----APGSARHSHAFMPFSGG 447          
BLAST of DR908399 vs. ExPASy Swiss-Prot
Match: CP4AA_RAT (Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a10 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.604e-13
Identity = 36/113 (31.86%), Postives = 60/113 (53.10%), Query Frame = 2
Query:   83 KAQEEIDRVL-QGRSASFEDIKDLKFLTRCINESMRLYPHPPVLIRRAQVDDVLPGNYKVNAGQDIMISVYNIHHSSQVWERAEEFLPERFDLEGPMPNETNTDFRFIPFSGG 418
            + +EE+  VL  G S +++ +  + + T CI E++RLYP  P ++R        P    +  G  + +S+Y +HH+ +VW   E F P RF  + P  + +     F+PFSGG
Sbjct:  345 RCREEVQSVLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEVFDPSRFAPDSPRHSHS-----FLPFSGG 452          
The following BLAST results are available for this feature:
BLAST of DR908399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
C97B2_SOYBN1.790e-2740.13Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=... [more]
C97B1_PEA8.155e-2339.49Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 P... [more]
C97B3_ARATH4.940e-2137.93Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CY... [more]
CYPE_BACSU3.189e-1435.65Probable bifunctional P-450/NADPH-P450 reductase 2... [more]
CP4F5_RAT1.582e-1337.39Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5... [more]
CPXB_BACME2.067e-1332.52Bifunctional P-450/NADPH-P450 reductase OS=Bacillu... [more]
CP4F6_RAT2.699e-1337.61Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6... [more]
CP4AP_PIG4.604e-1335.40Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2... [more]
CP4AO_PIG4.604e-1334.51Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
CP4AA_RAT4.604e-1331.86Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16527 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-53_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908399 ID=DR908399; Name=DR908399; organism=Citrus sinensis; type=EST; length=649bp
ATTGACGTCTGCTTTTGTATGTGCATTCTCAATGGCTCAGAATGTTTCTA
AATATGTTCTTCAGGATTGTAACTCATTGATGAAAGCACAAGAAGAGATT
GATAGAGTATTGCAGGGAAGATCTGCATCCTTTGAAGACATAAAAGATCT
GAAATTCCTAACACGTTGCATAAATGAGTCAATGCGTCTCTACCCACATC
CTCCTGTCTTGATAAGAAGAGCTCAAGTAGATGATGTGCTCCCTGGAAAT
TACAAGGTTAATGCTGGTCAAGATATAATGATTTCAGTTTACAATATCCA
CCATTCCTCACAGGTCTGGGAGAGAGCAGAAGAGTTTTTACCAGAAAGGT
TTGACTTGGAAGGCCCCATGCCCAATGAAACAAATACAGATTTTAGATTC
ATTCCTTTCAGCGGAGGCCTCGGAAGTGTGTTGGAGATCAGTTTGCTCTG
CTAGAGGCTATTGTTGCTCTAGCAATACTCTTGCAGAATATGAACTTTGA
ACTAGTTCCTGATCAGAATATCAACATGACTACTGGAGCACCATACACAC
AACGAATGGTTTATACATGAAACTCAGACAACGACACATTTAAATTCTTT
TGTATCTACTTCAAGGTAAGTGGTCAAGTCGTTATAGCTGCTCGGATAT
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