DR908381

Overview
NameDR908381
Unique NameDR908381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR908381_ssr545 microsatellite DR908381_ssr545:545..556. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13201 contig Csv1_Contig13201:66..717. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908381 vs. ExPASy Swiss-Prot
Match: YIPL_ORYSJ (Putative yippee-like protein Os10g0369500 OS=Oryza sativa subsp. japonica GN=Os10g0369500 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.992e-36
Identity = 74/116 (63.79%), Postives = 90/116 (77.59%), Query Frame = 2
Query:  128 MGRLFIESL------SGPR--IFKCKSCKVDSASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK 451
            MG LF+E L       GP   + KC+ C+VD+AS D I+S+ F+GRFGRAYLF  VVN+SLGP E+R L++GLH+V DIYCS CQQ+LGWRYEKAYEES+KYKEG +ILEK RM K
Sbjct:    1 MGLLFVELLPRHGDGGGPASAVLKCRRCRVDAASADAILSRDFRGRFGRAYLFDHVVNISLGPNEDRYLMTGLHTVKDIYCSCCQQILGWRYEKAYEESEKYKEGKFILEKARMWK 116          
BLAST of DR908381 vs. ExPASy Swiss-Prot
Match: YPEL4_RAT (Protein yippee-like 4 OS=Rattus norvegicus GN=Ypel4 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  164 RIFKCKSCKVDSASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK-AGW 460
            R + C  C+   A  D ++SK+FQG  GRAYLF SVVNV  GP E+RLL++GLHSV DI+C SC+  LGW+YE+A+E SQKYKEG YI+E   M+K  GW
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKYKEGKYIIEMSHMVKDNGW 126          
BLAST of DR908381 vs. ExPASy Swiss-Prot
Match: YPEL4_MOUSE (Protein yippee-like 4 OS=Mus musculus GN=Ypel4 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  164 RIFKCKSCKVDSASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK-AGW 460
            R + C  C+   A  D ++SK+FQG  GRAYLF SVVNV  GP E+RLL++GLHSV DI+C SC+  LGW+YE+A+E SQKYKEG YI+E   M+K  GW
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKYKEGKYIIEMSHMVKDNGW 126          
BLAST of DR908381 vs. ExPASy Swiss-Prot
Match: YPEL4_HUMAN (Protein yippee-like 4 OS=Homo sapiens GN=YPEL4 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  164 RIFKCKSCKVDSASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK-AGW 460
            R + C  C+   A  D ++SK+FQG  GRAYLF SVVNV  GP E+RLL++GLHSV DI+C SC+  LGW+YE+A+E SQKYKEG YI+E   M+K  GW
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKYKEGKYIIEMSHMVKDNGW 126          
BLAST of DR908381 vs. ExPASy Swiss-Prot
Match: YPEL4_CERAE (Protein yippee-like 4 OS=Cercopithecus aethiops GN=YPEL4 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  164 RIFKCKSCKVDSASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK-AGW 460
            R + C  C+   A  D ++SK+FQG  GRAYLF SVVNV  GP E+RLL++GLHSV DI+C SC+  LGW+YE+A+E SQKYKEG YI+E   M+K  GW
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKYKEGKYIIEMSHMVKDNGW 126          
BLAST of DR908381 vs. ExPASy Swiss-Prot
Match: YPEL3_ORYLA (Protein yippee-like 3 OS=Oryzias latipes GN=ypel3 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.917e-28
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  164 RIFKCKSCKVDSASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK-AGW 460
            R + C  C+   A+ D ++SK+FQG  GRAYLF SVVNV  GP EERLL++GLH+V DIYC +C   LGW+YE+A+E SQKYKEG YI+E   M+K  GW
Sbjct:   19 RRYSCVHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERLLLTGLHAVADIYCENCHTTLGWKYEQAFELSQKYKEGKYIIELSHMIKDNGW 118          
BLAST of DR908381 vs. ExPASy Swiss-Prot
Match: YPEL2_PONAB (Protein yippee-like 2 OS=Pongo abelii GN=YPEL2 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.917e-28
Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  164 RIFKCKSCKVDSASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK-AGW 460
            R + C  C+   A+ D ++SK+FQG  GRAYLF SVVNV  GP EER+L++GLH+V DIYC +C+  LGW+YE A+E SQKYKEG YI+E   M+K  GW
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKYIIELAHMIKDNGW 118          
BLAST of DR908381 vs. ExPASy Swiss-Prot
Match: YPEL2_MOUSE (Protein yippee-like 2 OS=Mus musculus GN=Ypel2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.917e-28
Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  164 RIFKCKSCKVDSASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK-AGW 460
            R + C  C+   A+ D ++SK+FQG  GRAYLF SVVNV  GP EER+L++GLH+V DIYC +C+  LGW+YE A+E SQKYKEG YI+E   M+K  GW
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKYIIELAHMIKDNGW 118          
BLAST of DR908381 vs. ExPASy Swiss-Prot
Match: YPEL2_HUMAN (Protein yippee-like 2 OS=Homo sapiens GN=YPEL2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.917e-28
Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  164 RIFKCKSCKVDSASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK-AGW 460
            R + C  C+   A+ D ++SK+FQG  GRAYLF SVVNV  GP EER+L++GLH+V DIYC +C+  LGW+YE A+E SQKYKEG YI+E   M+K  GW
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKYIIELAHMIKDNGW 118          
BLAST of DR908381 vs. ExPASy Swiss-Prot
Match: YPEL2_CERAE (Protein yippee-like 2 OS=Cercopithecus aethiops GN=YPEL2 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.917e-28
Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query:  164 RIFKCKSCKVDSASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK-AGW 460
            R + C  C+   A+ D ++SK+FQG  GRAYLF SVVNV  GP EER+L++GLH+V DIYC +C+  LGW+YE A+E SQKYKEG YI+E   M+K  GW
Sbjct:   19 RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKYIIELAHMIKDNGW 118          
The following BLAST results are available for this feature:
BLAST of DR908381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
YIPL_ORYSJ2.992e-3663.79Putative yippee-like protein Os10g0369500 OS=Oryza... [more]
YPEL4_RAT7.893e-2958.00Protein yippee-like 4 OS=Rattus norvegicus GN=Ypel... [more]
YPEL4_MOUSE7.893e-2958.00Protein yippee-like 4 OS=Mus musculus GN=Ypel4 PE=... [more]
YPEL4_HUMAN7.893e-2958.00Protein yippee-like 4 OS=Homo sapiens GN=YPEL4 PE=... [more]
YPEL4_CERAE7.893e-2958.00Protein yippee-like 4 OS=Cercopithecus aethiops GN... [more]
YPEL3_ORYLA3.917e-2858.00Protein yippee-like 3 OS=Oryzias latipes GN=ypel3 ... [more]
YPEL2_PONAB3.917e-2857.00Protein yippee-like 2 OS=Pongo abelii GN=YPEL2 PE=... [more]
YPEL2_MOUSE3.917e-2857.00Protein yippee-like 2 OS=Mus musculus GN=Ypel2 PE=... [more]
YPEL2_HUMAN3.917e-2857.00Protein yippee-like 2 OS=Homo sapiens GN=YPEL2 PE=... [more]
YPEL2_CERAE3.917e-2857.00Protein yippee-like 2 OS=Cercopithecus aethiops GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16509 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-41_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908381 ID=DR908381; Name=DR908381; organism=Citrus sinensis; type=EST; length=652bp
CTAGCCAAGAGATAAAAAAGAGAAGAAGACCCATTTGATTGATCAAAGTC
CAAACGCACATAACATAAGAAAGAGAAGCAAAATTTGATTAGTTAAAGGT
TTGATAGAACTTAAAAGAATCTTTCCAATGGGGCGGCTTTTCATAGAGTC
ATTGAGTGGGCCTCGGATCTTCAAGTGCAAGAGTTGCAAAGTCGACTCGG
CATCTCCCGATCACATCGTTTCCAAGGCTTTTCAAGGCCGTTTTGGCCGT
GCTTATCTTTTCCGATCTGTGGTAAATGTGTCTCTTGGGCCTAGAGAAGA
GCGGCTTCTTGTCAGTGGGTTGCATTCCGTGAATGACATTTATTGCAGCT
CCTGTCAGCAGTTACTCGGCTGGAGATATGAGAAGGCATATGAAGAGAGC
CAGAAGTATAAAGAAGGGATGTACATTCTGGAAAAGGAACGAATGCTGAA
GGCAGGTTGGTGATGTCATGTTATATGGATACATATAAAACATATTGGAA
GAAGCCAATCTTTTTGTAGCTGAACATTTTTTCTCTCTTTTAAGGAAAGA
AAGAAAGAATTGATCTGATCTCATCGTGTTAGTAGACATTGTAGGCTGGC
ATGTTCGCAGCTGCTGCAACTTTGATTTAATGAAAATAACTTTTAGATTA
CT
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