DR908372

Overview
NameDR908372
Unique NameDR908372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 3.183e-86
Identity = 152/218 (69.72%), Postives = 181/218 (83.03%), Query Frame = 2 
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            PLLIF+D D++ AAD+ALLG  +NKGEICVASSRV+VQEGIYD+  +KLVEKAK W VGDPFD   RQGPQVDK+QF++ILSYIEHGK EGATLLT            +PTIF +VTEDM I ++EIFGPVM+LMKFKTVEE IK ANNT+YGLAAGI+++D+++ NTVSRSI+AGIIW+NCYF FD DCPYGGYKMSG  R+ G+++L NYLQ KSV
Sbjct:  274 PLLIFNDADIDKAADLALLGCFYNKGEICVASSRVFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIGDKGYFIQPTIFADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSV 491
[Close]
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: ALDH2_MACPR (Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=Macroscelides proboscideus PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 5.841e-64
Identity = 112/218 (51.38%), Postives = 158/218 (72.48%), Query Frame = 2 
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++F D D++ A + A  G+ F++G+ CVA+SR++V+E IYDEF ++ VE+AK +V+G+P  P V QGPQ+DK+Q+D+I+  IE GK+EGA L              +PT+F+NVT++M IAK EIFGPV  +MKFK+++E IK ANNT YGLAAG+ TKDL+ A TVS +++AG +W+NCY A    CP+GG+KMSG GR+ G   LH Y +VK+V
Sbjct:   14 PCIVFADADLDNAVEFAHRGLFFHQGQCCVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYDKIIDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTFYGLAAGVFTKDLDKAVTVSAALQAGTVWVNCYMANSVQCPFGGFKMSGNGRELGEYGLHEYTEVKTV 231
[Close]
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 242.662 bits (618), Expect = 1.301e-63
Identity = 108/218 (49.54%), Postives = 158/218 (72.48%), Query Frame = 2 
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++F D D++ A + A  G+ +++G+ CVA+SR++V+E +YDEF K+ VE+AK +V+G+P  P + QGPQ+DK+Q D+IL  IE GK+EGA L              +PT+F+NVT++M IAK EIFGPV  +MKFK+V++ IK ANNT YGLAAG+ TKDL+ A TVS +++AG++W+NCY    + CP+GG+KMSG GR+ G   L+ Y ++K+V
Sbjct:  275 PCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKTV 492
[Close]
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.301e-63
Identity = 110/218 (50.46%), Postives = 157/218 (72.02%), Query Frame = 2 
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IYDEF ++ +E+AK + +GDP  P V+QGPQ+DK+QF +IL  IE GK+EGA L              +PT+F+NVT+DM IAK EIFGPV  +MKFKT++E IK ANNT YGLAA + TKD++ A T + +++AG +W+NCY AF + CP+GG+KMSG GR+ G   L  Y +VK+V
Sbjct:  283 PNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAGTVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTV 500
[Close]
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.439e-62
Identity = 108/218 (49.54%), Postives = 158/218 (72.48%), Query Frame = 2 
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++F D D+++A + A  G+ F++G+ICVA+SR++V+E IYDEF ++ VE+AK +V+G+P D  + QGPQ+DK+Q  +IL  IE GK+EGA L              +PT+F+NVT++M IAK EIFGPV  +MKFK+++E IK ANNT YGLAAG+ TKDL+ A TVS +++AG +W+NCY      CP+GG+KMSG GR+ G + ++ Y ++K+V
Sbjct:  275 PCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLDSGISQGPQIDKEQHAKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDEVIKRANNTPYGLAAGVFTKDLDRAITVSSALQAGTVWVNCYLTLSVQCPFGGFKMSGNGREMGEQGVYEYTELKTV 492
[Close]
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.439e-62
Identity = 107/218 (49.08%), Postives = 160/218 (73.39%), Query Frame = 2 
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++F D D+++A + A  G+ F++G+ICVA+SR++V+E IYDEF ++ VE+AK +++G+P +  + QGPQ+DK+Q ++IL  IE GK+EGA L              +PT+F+NVT++M IAK EIFGPV  +MKFK++++ IK ANNT YGLAAG+ TKDL+ A TVS +++AG++W+NCY A    CP+GG+KMSG GR+ G   L+ Y ++K+V
Sbjct:  275 PCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYILGNPLNSGINQGPQIDKEQHNKILGLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSMDDVIKRANNTTYGLAAGVFTKDLDKAITVSSALQAGMVWVNCYLAVPVQCPFGGFKMSGNGRELGEHGLYEYTELKTV 492
[Close]
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 239.195 bits (609), Expect = 1.439e-62
Identity = 106/218 (48.62%), Postives = 157/218 (72.02%), Query Frame = 2 
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++F D D++ A + A  G+ +++G+ CVA+SR++V+E +YDEF +K VE+AK +V+G+P    + QGPQ+DK+Q D+IL  IE GK+EGA L              +PT+F+NVT++M IAK EIFGPV  +MKFK++++ IK ANNT YGLAAG+ TKDL+ A TVS +++AG++W+NCY    + CP+GG+KMSG GR+ G   L+ Y ++K+V
Sbjct:  275 PCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVSSALQAGVVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTELKTV 492
[Close]
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.077e-61
Identity = 106/218 (48.62%), Postives = 154/218 (70.64%), Query Frame = 2 
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++F+D D++ A ++A   + FN+G+ C A SR +V E +YDEF +K   +A   VVGDPF   + QGPQ+D KQF++++ YI+ G    ATL              +PT+F+NV +DMLIA++EIFGPV +++KF  V+E IK AN T+YGLAAG+ TK+L+ AN VSR+++AG +W+NC+  FD+  P+GGYKMSG GR+ G+ SL+NYLQ+K+V
Sbjct:  311 PFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAV 528
[Close]
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.077e-61
Identity = 103/218 (47.25%), Postives = 156/218 (71.56%), Query Frame = 2 
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++  D D++ A + A  G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK +++G+P  P V QGPQ+DK+Q+D+IL  IE GK+EGA L              +PT+F+NVT++M IAK EIFGPV  +MKFK++++ IK ANNT YGL+AG+ TKD++ A T+S +++AG +W+NCY    + CP+GG+KMSG GR+ G    H Y +VK+V
Sbjct:  275 PCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492
[Close]
BLAST of DR908372 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 6.044e-61
Identity = 104/218 (47.71%), Postives = 156/218 (71.56%), Query Frame = 2 
Query:    2 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 655
            P ++F D D++ A + A  G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK +V+G+P  P V QGPQ+DK+Q+++IL  IE GK+EGA L              +PT+F++VT+DM IAK EIFGPV  +MKFK++++ IK ANNT YGL+AGI T D++ A TVS ++++G +W+NCY    + CP+GG+KMSG GR+ G    H Y +VK+V
Sbjct:  275 PCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492
The following BLAST results are available for this feature:
BLAST of DR908372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL2C4_ARATH3.183e-8669.72Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]
ALDH2_MACPR5.841e-6451.38Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=... [more]
AL1A1_MOUSE1.301e-6349.54Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]
AL1A1_CHICK1.301e-6350.46Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A... [more]
AL1A7_RAT1.439e-6249.54Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norv... [more]
AL1A7_MOUSE1.439e-6249.08Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]
AL1A1_RAT1.439e-6248.62Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
AL2B4_ARATH2.077e-6148.62Aldehyde dehydrogenase family 2 member B4, mitocho... [more]
AL1A1_HUMAN2.077e-6147.25Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1... [more]
AL1A1_SHEEP6.044e-6147.71Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16500 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-54_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908372 ID=DR908372; Name=DR908372; organism=Citrus sinensis; type=EST; length=655bp
ACCTCTCTTGATTTTTGATGATGTTGATGTAAACACAGCTGCAGACATGG
CGCTTCTGGGCATCCTGTTTAACAAGGGAGAAATTTGTGTGGCAAGTTCT
CGTGTTTATGTCCAGGAAGGAATTTATGATGAATTTGAAAAGAAGTTGGT
CGAAAAGGCAAAAGCTTGGGTAGTTGGTGATCCTTTTGATCCTGCAGTTC
GTCAAGGACCCCAGGTCGATAAGAAGCAGTTCGATAGAATTCTTTCGTAC
ATTGAGCATGGCAAGAGGGAAGGAGCCACATTGTTAACAGGGGGTAAGCC
TATCGGCAAGAAGGGGTATTATATTGAGCCTACAATTTTCACAAATGTTA
CGGAAGACATGCTGATAGCAAAGAATGAAATTTTCGGACCTGTGATGGCA
TTGATGAAATTCAAGACTGTTGAGGAGGCAATTAAGAGTGCAAATAATAC
CAGATATGGCCTAGCAGCAGGCATTATGACAAAGGACTTGAATGTGGCTA
ATACCGTCTCTAGATCAATTCGAGCAGGCATTATATGGATCAATTGTTAT
TTTGCTTTTGACAGCGACTGCCCTTACGGAGGATACAAGATGAGTGGATT
TGGTAGAGACTGTGGACTGGAATCTCTACATAACTATCTGCAGGTCAAGT
CCGTT
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