DR908370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908370 vs. ExPASy Swiss-Prot
Match: PIN1C_ORYSJ (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica GN=PIN1C PE=2 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.209e-85 Identity = 168/212 (79.25%), Postives = 176/212 (83.02%), Query Frame = 2 Query: 74 DFSFGNRRGLESNNNEGEKVGDEK------------------PKAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNVQMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLG 655 DFSFGNR E + + GDEK P AMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGL+WSLV FRWN +MPAI+ KSISILSDAGLGMAMFSLGLFMALQPRIIACGN +A F+MAVRFLTGPAVMAAASIAVGLRG LLHVAIVQAALPQGIVPFVFAKEY+VHPDILST VIFGMLIALPITLVYYILLG Sbjct: 384 DFSFGNRGVAERD----AEAGDEKSVAAAVSGEHGKPGLTPAPTAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIILKSISILSDAGLGMAMFSLGLFMALQPRIIACGNKVATFAMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYSVHPDILSTAVIFGMLIALPITLVYYILLG 591
BLAST of DR908370 vs. ExPASy Swiss-Prot
Match: PIN1_ORYSJ (Auxin efflux carrier component 1 OS=Oryza sativa subsp. japonica GN=PIN1 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 1.931e-83 Identity = 163/209 (77.99%), Postives = 173/209 (82.78%), Query Frame = 2 Query: 74 DFSFGNRRGLESNNNEGEKVGDEK---------------PKAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNVQMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLG 655 DFSFGNR ++ + + GDEK P AMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGL+WSLV FRWN +MPAIV KSISILSDAGLGMAMFSLGLFMALQP IIACGN +A ++MAVRFL GPAVMAAAS AVGLRG LLHVAIVQAALPQGIVPFVFAKEY+VHP ILST VIFGMLIALPITLVYYILLG Sbjct: 390 DFSFGNRGVMDRD----AEAGDEKAAAAAGADPSKAMAAPTAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIVLKSISILSDAGLGMAMFSLGLFMALQPHIIACGNKVATYAMAVRFLAGPAVMAAASFAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYSVHPSILSTAVIFGMLIALPITLVYYILLG 594
BLAST of DR908370 vs. ExPASy Swiss-Prot
Match: PIN1B_ORYSJ (Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica GN=PIN1B PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 9.583e-83 Identity = 159/207 (76.81%), Postives = 179/207 (86.47%), Query Frame = 2 Query: 74 DFSFGNRRGLESNNNEGEKVGDE-----KPK--------AMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNVQMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLG 655 ++SFGN+ E + K+G +PK AMPP SVMTRLILIMVWRKLIRNPNTYSSL+G++WSLVS+RW ++MPAI+A+SISILSDAGLGMAMFSLGLFMALQPRIIACGNS+A+++MAVRFL GPAVMAAASIAVGLRGVLLH+AIVQAALPQGIVPFVFAKEYNVHP+ILST VIFGMLIALPITLVYYILLG Sbjct: 349 EYSFGNKN--EKDGPTLSKLGSNSTAQLRPKDDGEGMAAAMPPASVMTRLILIMVWRKLIRNPNTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILSTAVIFGMLIALPITLVYYILLG 553
BLAST of DR908370 vs. ExPASy Swiss-Prot
Match: PINI_ARATH (Auxin efflux carrier component 1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 2.610e-80 Identity = 152/200 (76.00%), Postives = 169/200 (84.50%), Query Frame = 2 Query: 74 DFSFGNRR------GLESNNNEGEKVGDEKPKAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNVQMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLG 655 +FSFGN+ + NN K + K MPPTSVMTRLILIMVWRKLIRNPN+YSSL G+ WSL+SF+WN++MPA++AKSISILSDAGLGMAMFSLGLFMAL PRIIACGN AAF+ A+RF+ GPAVM AS AVGLRGVLLHVAI+QAALPQGIVPFVFAKEYNVHPDILST VIFGMLIALPITL+YYILLG Sbjct: 424 EFSFGNKDDDSKVLATDGGNNISNKT--TQAKVMPPTSVMTRLILIMVWRKLIRNPNSYSSLFGITWSLISFKWNIEMPALIAKSISILSDAGLGMAMFSLGLFMALNPRIIACGNRRAAFAAAMRFVVGPAVMLVASYAVGLRGVLLHVAIIQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLLYYILLG 621
BLAST of DR908370 vs. ExPASy Swiss-Prot
Match: PIN2_ORYSJ (Probable auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica GN=PIN2 PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 7.593e-80 Identity = 147/172 (85.47%), Postives = 160/172 (93.02%), Query Frame = 2 Query: 140 EKPKAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNVQMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLG 655 E MPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWN+QMP+I+ SISILSDAGLGMAMFSLGLFMALQP+II+CG ++A F+MAVRFLTGPAV+AA SIA+GLRGVLLHVAIVQAALPQGIVPFVFAKEYN HP ILST VIFGMLIALPIT++YY+LLG Sbjct: 458 EAAHPMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNIQMPSIIKGSISILSDAGLGMAMFSLGLFMALQPKIISCGKTVATFAMAVRFLTGPAVIAATSIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYNCHPQILSTAVIFGMLIALPITILYYVLLG 629
BLAST of DR908370 vs. ExPASy Swiss-Prot
Match: PIN3_ARATH (Auxin efflux carrier component 3 OS=Arabidopsis thaliana GN=PIN3 PE=1 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 6.428e-79 Identity = 147/169 (86.98%), Postives = 159/169 (94.08%), Query Frame = 2 Query: 149 KAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNVQMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLG 655 K MPP SVMTRLILIMVWRKLIRNPNTYSSLIGL+W+LV+FRW+V MP I+ +SISILSDAGLGMAMFSLGLFMALQP++IACGNS+A F+MAVRFLTGPAVMA A+IA+GLRG LL VAIVQAALPQGIVPFVFAKEYNVHP ILSTGVIFGMLIALPITLVYYILLG Sbjct: 471 KNMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWALVAFRWHVAMPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSVATFAMAVRFLTGPAVMAVAAIAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLG 639
BLAST of DR908370 vs. ExPASy Swiss-Prot
Match: PIN7_ARATH (Auxin efflux carrier component 7 OS=Arabidopsis thaliana GN=PIN7 PE=1 SV=2) HSP 1 Score: 293.123 bits (749), Expect = 8.395e-79 Identity = 150/185 (81.08%), Postives = 164/185 (88.65%), Query Frame = 2 Query: 104 ESNNNEGEKVGDEKP-KAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNVQMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLG 655 E N E + G+ P K MPP SVMTRLILIMVWRKLIRNPNTYSSLIGL+W+LV+FRW+V MP I+ +SISILSDAGLGMAMFSLGLFMALQP++IACGNS A F+MAVRF TGPAVMA A++A+GLRG LL VAIVQAALPQGIVPFVFAKEYNVHP ILSTGVIFGMLIALPITLVYYILLG Sbjct: 434 ELNPKEAIETGETVPVKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWALVAFRWDVAMPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSTATFAMAVRFFTGPAVMAVAAMAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLG 618
BLAST of DR908370 vs. ExPASy Swiss-Prot
Match: PIN3A_ORYSJ (Probable auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica GN=PIN3A PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.443e-78 Identity = 149/167 (89.22%), Postives = 154/167 (92.22%), Query Frame = 2 Query: 155 MPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNVQMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLG 655 MPP SVMTRLILIMVWRKLIRNPNTYSSL+GL WSLV+FRW+V MPAIV KSISILSDAGLGMAMFSLGLFMALQP IIACG S A SMAVRFL GPAVMAAASIA+GLRG LLHVAIVQAALPQGIVPFVFAKEYNVHP ILST VIFGMLIALPITL+YYILLG Sbjct: 451 MPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMALQPSIIACGKSAAVVSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLG 617
BLAST of DR908370 vs. ExPASy Swiss-Prot
Match: PIN4_ARATH (Auxin efflux carrier component 4 OS=Arabidopsis thaliana GN=PIN4 PE=1 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 5.442e-78 Identity = 147/185 (79.46%), Postives = 163/185 (88.11%), Query Frame = 2 Query: 101 LESNNNEGEKVGDEKPKAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNVQMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLG 655 LE+ +G G MPPTSVMTRLILIMVWRKLIRNPNTYSSLIGL+W+LV++RW+V MP I+ +SISILSDAGLGMAMFSLGLFMALQP+IIACGNS+A F+MAVRF+TGPA+MA A IA+GL G LL +AIVQAALPQGIVPFVFAKEYNVHP ILSTGVIFGMLIALPITLVYYILLG Sbjct: 434 LEAAGGDG---GGNNGTHMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWALVAYRWHVAMPKILQQSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAVRFITGPAIMAVAGIAIGLHGDLLRIAIVQAALPQGIVPFVFAKEYNVHPTILSTGVIFGMLIALPITLVYYILLG 615
BLAST of DR908370 vs. ExPASy Swiss-Prot
Match: PIN2_ARATH (Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2) HSP 1 Score: 290.426 bits (742), Expect = 5.442e-78 Identity = 144/183 (78.69%), Postives = 163/183 (89.07%), Query Frame = 2 Query: 119 EGEKVGDEKP----KAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLVSFRWNVQMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLG 655 +G V D P + MPP SVMTRLILIMVWRKLIRNPNTYSSL GL WSLVSF+WN++MP I++ SISILSDAGLGMAMFSLGLFMALQP+IIACG S+A F+MAVRFLTGPAV+AA SIA+G+RG LLH+AIVQAALPQGIVPFVFAKEYNVHPDILST VIFGML+ALP+T++YY+LLG Sbjct: 464 KGSDVEDGGPGPRKQQMPPASVMTRLILIMVWRKLIRNPNTYSSLFGLAWSLVSFKWNIKMPTIMSGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAGFAMAVRFLTGPAVIAATSIAIGIRGDLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLVALPVTVLYYVLLG 646 The following BLAST results are available for this feature:
BLAST of DR908370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908370 ID=DR908370; Name=DR908370; organism=Citrus sinensis; type=EST; length=655bpback to top |