DR908369
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D2_ARATH (V-type proton ATPase subunit d2 OS=Arabidopsis thaliana GN=VHA-D2 PE=2 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 6.318e-114 Identity = 179/189 (94.71%), Postives = 185/189 (97.88%), Query Frame = 3
Query: 3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQ 569
NIHGGYLEAIVRG+RAGLLT ADYNNLCQCE LDDIKMHLSAT+YGPYLQNEPSPLHTTTIVEKCTLKLVD+YKHMLCQATEP+STFLEYI YGHMIDNVVLIVTGTLHERDVQEL+EKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSEC+TSEDLDDMNIEIMRNTLYKAYLEDFY FCQ
Sbjct: 10 NIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHERDVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECLTSEDLDDMNIEIMRNTLYKAYLEDFYNFCQ 198 HSP 2 Score: 56.225 bits (134), Expect = 6.318e-114 Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 2
Query: 569 ELGGATAEIMSDLLAFEADRRAVNITINS 655
+LGGATAEIMSDLLAFEADRRAVNITINS
Sbjct: 199 KLGGATAEIMSDLLAFEADRRAVNITINS 227
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D1_ARATH (V-type proton ATPase subunit d1 OS=Arabidopsis thaliana GN=VHA-D1 PE=2 SV=1) HSP 1 Score: 375.17 bits (962), Expect = 1.404e-113 Identity = 179/189 (94.71%), Postives = 185/189 (97.88%), Query Frame = 3
Query: 3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQ 569
NIHGGYLEAIVRG+RAGLLT ADYNNLCQCE LDDIKMHLSAT+YG YLQNEPSPLHTTTIVEKCTLKLVD+YKHMLCQATEP+STFLEYI YGHMIDNVVLIVTGTLHERDVQEL+EKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSEC+TSEDLDDMNIEIMRNTLYKAYLEDFYKFCQ
Sbjct: 10 NIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGSYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHERDVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECLTSEDLDDMNIEIMRNTLYKAYLEDFYKFCQ 198 HSP 2 Score: 56.225 bits (134), Expect = 1.404e-113 Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 2
Query: 569 ELGGATAEIMSDLLAFEADRRAVNITINS 655
+LGGATAEIMSDLLAFEADRRAVNITINS
Sbjct: 199 KLGGATAEIMSDLLAFEADRRAVNITINS 227
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D_ORYSJ (Probable V-type proton ATPase subunit d OS=Oryza sativa subsp. japonica GN=Os01g0587000 PE=2 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 9.906e-112 Identity = 177/189 (93.65%), Postives = 185/189 (97.88%), Query Frame = 3
Query: 3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQ 569
NIH G+LEAIVRG R+GLLTAADYNNLCQCE LDD+KMHL+ATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHM+CQATEPLSTFL+YITYGHMIDNVVLIVTGTLHERDV ELLEKCHPLGMFDSIA+LAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFC+
Sbjct: 10 NIHDGFLEAIVRGNRSGLLTAADYNNLCQCENLDDVKMHLTATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMMCQATEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCE 198 HSP 2 Score: 53.1434 bits (126), Expect = 9.906e-112 Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 2
Query: 569 ELGGATAEIMSDLLAFEADRRAVNITINS 655
+LGGATAEIM DLL+FEADRRAVNITINS
Sbjct: 199 KLGGATAEIMCDLLSFEADRRAVNITINS 227
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D_DICDI (V-type proton ATPase subunit d OS=Dictyostelium discoideum GN=vatD-1 PE=1 SV=2) HSP 1 Score: 275.018 bits (702), Expect = 4.314e-80 Identity = 122/189 (64.55%), Postives = 158/189 (83.60%), Query Frame = 3
Query: 3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQ 569
N GYLEAI+RG++ G+L+ ADYNNLCQC+ L+D+KMH +T+YG +L EPSP+HTTTI EK T KLV E+ H+ QA EPLSTF+++I+YG+MIDNVVL++TGTLHERD+ EL++KCHPLG+F S+ATL+V N+ +LY VL+DTPLAPY C++ EDLD+MNIEI+RNTLYKAYLEDFY +C+
Sbjct: 16 NKDDGYLEAILRGFKKGILSRADYNNLCQCDNLEDMKMHFISTDYGDFLAGEPSPIHTTTIAEKATGKLVSEFNHIRNQAVEPLSTFMDFISYGYMIDNVVLLITGTLHERDISELVDKCHPLGLFKSMATLSVVHNVADLYNNVLIDTPLAPYIQGCLSEEDLDEMNIEIIRNTLYKAYLEDFYNYCK 204 HSP 2 Score: 44.669 bits (104), Expect = 4.314e-80 Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 2
Query: 572 LGGATAEIMSDLLAFEADRRAVNITINS 655
LGG T IMSD+L FEADRR++NITINS
Sbjct: 206 LGGQTELIMSDILKFEADRRSINITINS 233
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D1_DROME (V-type proton ATPase subunit d 1 OS=Drosophila melanogaster GN=VhaAC39 PE=1 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.043e-72 Identity = 113/190 (59.47%), Postives = 146/190 (76.84%), Query Frame = 3
Query: 3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQN 572
NI GYLE + RG++ G+L ADY NL QCETL+D+K+HL T+YG +L NEPSPL + I +K KLV E++HM A EPLS FL++ITYG+MIDN++L++TGTLH+R + EL+ KCHPLG F+ + + VA ELY VLVDTPLAP+F +CI+ +DLD+MNIEI+RNTLYKAYLE FY FC+N
Sbjct: 9 NIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPSPLSVSVIDDKLREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQMEAIHVASTPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYNFCKN 198 HSP 2 Score: 45.4394 bits (106), Expect = 1.043e-72 Identity = 20/28 (71.43%), Postives = 26/28 (92.86%), Query Frame = 2
Query: 572 LGGATAEIMSDLLAFEADRRAVNITINS 655
+GGATA++M ++LAFEADRRA+ ITINS
Sbjct: 199 MGGATADVMCEILAFEADRRAIIITINS 226
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D_MANSE (V-type proton ATPase subunit d OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 5.600e-71 Identity = 110/189 (58.20%), Postives = 146/189 (77.25%), Query Frame = 3
Query: 3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQ 569
NI GYLE + RG++ G+L +DY NL QCETL+D+K+HL T+YG +L NEPSPL +TI +K KLV E++H+ + EPLSTFL++ITY +MIDN++L++TGTLH+R + EL+ KCHPLG F+ + + VA ELY VLVDTPLAP+F +CI+ +DLD+MNIEI+RNTLYKAYLE FY FC+
Sbjct: 7 NIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVSTIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYDFCK 195 HSP 2 Score: 44.669 bits (104), Expect = 5.600e-71 Identity = 19/29 (65.52%), Postives = 26/29 (89.66%), Query Frame = 2
Query: 569 ELGGATAEIMSDLLAFEADRRAVNITINS 655
++GG TA++M ++LAFEADRRA+ ITINS
Sbjct: 196 QIGGTTADVMCEILAFEADRRAIIITINS 224
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D1_MOUSE (V-type proton ATPase subunit d 1 OS=Mus musculus GN=Atp6v0d1 PE=1 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 1.928e-68 Identity = 109/188 (57.98%), Postives = 147/188 (78.19%), Query Frame = 3
Query: 3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFC 566
N+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L NE SPL + I +K K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYLE FYKFC
Sbjct: 10 NVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLTVSVIDDKLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFC 197 HSP 2 Score: 38.5058 bits (88), Expect = 1.928e-68 Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 2
Query: 572 LGGATAEIMSDLLAFEADRRAVNITINS 655
LGG TA+ M +L FEADRRA ITINS
Sbjct: 200 LGGTTADAMCPILEFEADRRAFIITINS 227
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D1_PONAB (V-type proton ATPase subunit d 1 OS=Pongo abelii GN=ATP6V0D1 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.275e-68 Identity = 108/188 (57.45%), Postives = 147/188 (78.19%), Query Frame = 3
Query: 3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFC 566
N+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L NE SPL + I ++ K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYLE FYKFC
Sbjct: 10 NVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFC 197 HSP 2 Score: 38.5058 bits (88), Expect = 4.275e-68 Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 2
Query: 572 LGGATAEIMSDLLAFEADRRAVNITINS 655
LGG TA+ M +L FEADRRA ITINS
Sbjct: 200 LGGTTADAMCPILEFEADRRAFIITINS 227
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D1_HUMAN (V-type proton ATPase subunit d 1 OS=Homo sapiens GN=ATP6V0D1 PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.275e-68 Identity = 108/188 (57.45%), Postives = 147/188 (78.19%), Query Frame = 3
Query: 3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFC 566
N+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L NE SPL + I ++ K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYLE FYKFC
Sbjct: 10 NVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFC 197 HSP 2 Score: 38.5058 bits (88), Expect = 4.275e-68 Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 2
Query: 572 LGGATAEIMSDLLAFEADRRAVNITINS 655
LGG TA+ M +L FEADRRA ITINS
Sbjct: 200 LGGTTADAMCPILEFEADRRAFIITINS 227
BLAST of DR908369 vs. ExPASy Swiss-Prot
Match: VA0D1_BOVIN (V-type proton ATPase subunit d 1 OS=Bos taurus GN=ATP6V0D1 PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.275e-68 Identity = 108/188 (57.45%), Postives = 147/188 (78.19%), Query Frame = 3
Query: 3 NIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFC 566
N+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L NE SPL + I ++ K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYLE FYKFC
Sbjct: 10 NVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFC 197 HSP 2 Score: 38.5058 bits (88), Expect = 4.275e-68 Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 2
Query: 572 LGGATAEIMSDLLAFEADRRAVNITINS 655
LGG TA+ M +L FEADRRA ITINS
Sbjct: 200 LGGTTADAMCPILEFEADRRAFIITINS 227 The following BLAST results are available for this feature:
BLAST of DR908369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908369 ID=DR908369; Name=DR908369; organism=Citrus sinensis; type=EST; length=655bpback to top |