DR908363

Overview
NameDR908363
Unique NameDR908363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908363 vs. ExPASy Swiss-Prot
Match: BH068_ARATH (Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 2.802e-50
Identity = 120/219 (54.79%), Postives = 141/219 (64.38%), Query Frame = 1
Query:   79 PLSP--RSCVTSLSS--------------NILDFSHTKPADKKNNQQH--PDHSSECNSTATRG-VSKKARVQ-TPSSQTPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEXXXXXXXXXXXXXXMRNQHCVHGDINGAFPEAPGQLLNDTCLKRKEA-----PNQDGQGKP-KDLRSRGLCLVPLSCTQQVGSDNGADFWAP 657
            P SP  +SCVT+ ++              N+LDFS        +  +H  PD SSECNS    G  +KK R+Q +PSSQ+ LKVRKEKLG RI ALHQLVSPFGKTDTASVL EAIGYIRFLQ QIE              MR+Q  + GD +  FPE PGQL+ND C+KR+ A      NQ+   +P KDLRSRGLCLVP+SCT QVGSDNGAD+WAP
Sbjct:  181 PNSPPNKSCVTTTTTTSLNSNDDNINNNNNMLDFSSNHNGLHLSEGRHTPPDRSSECNSLEIGGSTNKKPRLQPSPSSQSTLKVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAP 399          
BLAST of DR908363 vs. ExPASy Swiss-Prot
Match: BH133_ARATH (Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.461e-47
Identity = 116/228 (50.88%), Postives = 139/228 (60.96%), Query Frame = 1
Query:   25 HGAGEFQATAASNWPQIM--PLSP--RSCVTSLSSNILDFSHTKPADKKNNQQHPDHSSECNSTATRGVS---KKARVQTPSSQTPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEXXXXXXXXXXXXXXMRNQHCVHGDINGAFPEAPGQLLNDTCLKR----------KEAPNQDGQGKPKDLRSRGLCLVPLSCTQQVGSDNGADFWAP 657
            H A   Q ++ +N   IM  P SP  +SC T +++N          D  NN     + SECNS+   G S   KK ++Q PSSQ+ LKVRKEKLG RI +LHQLVSPFGKTDTASVL EAIGYIRFL  QIE              M +QH    ++NG FPE PGQL+N+ C+KR          K  PN++     KDLRSRGLCLVP+SCT QVGSDNGAD+WAP
Sbjct:  141 HQASMKQESSNNNSYGIMSSPNSPPNKSCATIINTN---------EDNNNNIHSGLNLSECNSSEMIGSSFANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRNNMMHQH-AQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPM---KDLRSRGLCLVPISCTLQVGSDNGADYWAP 355          
BLAST of DR908363 vs. ExPASy Swiss-Prot
Match: BH110_ARATH (Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 9.078e-25
Identity = 72/153 (47.06%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  181 HSSECNSTATRGVSKKARVQTPSSQTPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEXXXXXXXXXXXXXXMRNQHCVHGDINGAFPEAPGQLLNDTCLKRKEAPNQDGQGKPKDLRSRGLCLVPLSCTQQVGSDNG 639
            H+    + A    SKK RV++ SS  P KVRKEKLGDRI AL QLVSPFGKTDTASVL+EAIGYI+FLQ QIE               RN+           P    QL++ +         +  + + +DLRSRGLCLVPLSC   V  D G
Sbjct:  304 HNFLMATKAGENASKKPRVESRSSCPPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIE-----TLSVPYMRASRNR-----------PGKASQLVSQS--------QEGDEEETRDLRSRGLCLVPLSCMTYVTGDGG 432          
BLAST of DR908363 vs. ExPASy Swiss-Prot
Match: BH113_ARATH (Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22
Identity = 73/189 (38.62%), Postives = 96/189 (50.79%), Query Frame = 1
Query:   94 SCVTSLSSNILDFSHTKPADKKNNQQHPDHSSECNSTATRGVSKKA-RVQTPSSQTPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEXXXXXXXXXXXXXXMRNQHCVHGDINGAFPEAPGQLLNDTCLKRKEAPNQDGQGKPKDLRSRGLCLVPLSCTQQVGSDNGADFWAP 657
            SC+     N  D      + K + ++     +   S   R   KK  R Q  SS    KVRKE+LG+RI AL QLVSP+GKTD ASVL EA+GYI+FLQ QI+              + + + ++  ++G      G +  D               K KDLRSRGLCLVP+S T  V + NGADFW+P
Sbjct:   96 SCIKIDCRNSNDACTVDKSTKSSTKKRTGTGNGQESDQNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQ-------------VLCSPYLINHSLDG------GVVTGDVMAAM----------KAKDLRSRGLCLVPVSSTVHVENSNGADFWSP 255          
BLAST of DR908363 vs. ExPASy Swiss-Prot
Match: BH112_ARATH (Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.733e-20
Identity = 67/174 (38.51%), Postives = 87/174 (50.00%), Query Frame = 1
Query:  139 TKPADK-KNNQQHPDHSSECNSTATRGVSKKARVQTPSSQTPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEXXXXXXXXXXXXXXMRNQHCVHGDINGAFPEAPGQLLNDTCLKRKEAPNQDGQGKPKDLRSRGLCLVPLSCTQQVGSDNGADFWAP 657
            T+  DK KN +      S   +      +KK RV TPS     KVRKE L D+IT+L QLVSPFGKTDTASVL EAI YI+FL  Q+               +   +   G  N    +  G           ++ +QD + +  +LR  GLCLVP+S T  V ++  ADFW P
Sbjct:  237 TRLEDKTKNLKTRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQV-------------TVLSTPYMKQGASNQQQQQISG-----------KSKSQD-ENENHELRGHGLCLVPISSTFPVANETTADFWTP 385          
BLAST of DR908363 vs. ExPASy Swiss-Prot
Match: BH103_ARATH (Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.658e-18
Identity = 65/169 (38.46%), Postives = 81/169 (47.93%), Query Frame = 1
Query:  130 FSHTKPADKKNN-------QQHPDHSSECNSTATRGVSKKARVQTPSSQTPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEXXXXXXXXXXXXXXMRNQHCVHGDINGAFPEAPGQLLNDTCLKRKEAPNQDGQGKPKDLRSRGLCLVPLSCT 615
            F H KP +           ++  + S E     +    K+ R++TPS     KVRKEKLGDRITAL QLVSPFGKTDTASVL +AI YI+FLQ QI                       G+      ++     N  C  R            +DLRSRGLCL+P+S T
Sbjct:  138 FDHQKPKEDMQACKSLTTCKRASEKSGELEDIESSQPLKRPRLETPSHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHLNSIG--------SGEQKQWSDKSSNNTHNQNCSPR------------QDLRSRGLCLMPISST 286          
BLAST of DR908363 vs. ExPASy Swiss-Prot
Match: BH114_ARATH (Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.694e-18
Identity = 59/136 (43.38%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  223 KKARVQTPSSQTPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEXXXXXXXXXXXXXXMRNQHCVHGDINGAFPEAPGQLLNDTCLKRKEAPNQDGQGKPKDLRSRGLCLVPLSCTQQVGS 630
            K+ R++T S     KVRKEKLGDRITAL QLVSPFGKTDTASVL EA+ YI+FLQ Q+               ++ Q C     N       G++  D C  R+            DL SRGLCL+P+S +  V +
Sbjct:  159 KRPRLETLSPLPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQV--TVLSNPEQNTIGSVQQQQC----SNKKSINTQGEVEEDECSPRRYV----------DLSSRGLCLMPISASYPVAA 278          
BLAST of DR908363 vs. ExPASy Swiss-Prot
Match: BH123_ARATH (Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.404e-17
Identity = 67/191 (35.08%), Postives = 85/191 (44.50%), Query Frame = 1
Query:  112 SSNILDFSHTKPADKKNNQQHPDHSSECNSTATRGVSKKARVQTPS---------SQTPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEXXXXXXXXXXXXXXMRNQHCVHGDINGAFPEAPGQLLNDTCLKRKEAPNQDGQGKPKDLRSRGLCLVPLSCTQQVGSDNGADFWAP 657
            SSN            ++  + P + SE   +++  V +      P+         S +P   RKEK+GDRI AL QLVSPFGKTD ASVL EAI YI+FL  Q+               +++Q   H                 T L+  E P         DLRSRGLCLVP+S T  V  D   DFW P
Sbjct:  284 SSNFFPALQPPQIHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVS--ALSNPYMKSGASLQHQQSDH----------------STELEVSEEP---------DLRSRGLCLVPVSSTFPVTHDTTVDFWTP 447          
The following BLAST results are available for this feature:
BLAST of DR908363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
BH068_ARATH2.802e-5054.79Transcription factor bHLH68 OS=Arabidopsis thalian... [more]
BH133_ARATH6.461e-4750.88Transcription factor bHLH133 OS=Arabidopsis thalia... [more]
BH110_ARATH9.078e-2547.06Transcription factor bHLH110 OS=Arabidopsis thalia... [more]
BH113_ARATH2.472e-2238.62Transcription factor bHLH113 OS=Arabidopsis thalia... [more]
BH112_ARATH6.733e-2038.51Transcription factor bHLH112 OS=Arabidopsis thalia... [more]
BH103_ARATH1.658e-1838.46Transcription factor bHLH103 OS=Arabidopsis thalia... [more]
BH114_ARATH3.694e-1843.38Transcription factor bHLH114 OS=Arabidopsis thalia... [more]
BH123_ARATH1.404e-1735.08Transcription factor bHLH123 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16491 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-49_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908363 ID=DR908363; Name=DR908363; organism=Citrus sinensis; type=EST; length=657bp
CCCCAAGCGAACAACTTGTATCTTCATGGAGCTGGAGAATTTCAGGCCAC
TGCTGCTAGCAACTGGCCCCAAATCATGCCACTTTCCCCTAGGTCTTGTG
TCACCAGTTTAAGCAGTAACATATTAGACTTCTCTCATACCAAGCCAGCA
GATAAGAAAAATAATCAGCAACATCCTGATCATTCATCTGAGTGTAATAG
CACAGCAACTAGAGGAGTGAGCAAGAAAGCTAGGGTTCAGACCCCTTCAA
GCCAAACACCTTTGAAAGTGAGGAAGGAGAAGCTAGGAGACAGAATTACA
GCCCTTCACCAACTGGTTTCCCCATTTGGAAAGACTGACACTGCTTCTGT
CTTGTTAGAAGCTATTGGGTATATTAGATTCCTTCAAGGTCAAATTGAGG
CACTCAGCTCCCCTTATTTGAGCACTTCTCCTTCGGCAAGCATGAGGAAC
CAACATTGTGTTCACGGAGATATAAATGGTGCATTTCCTGAAGCCCCAGG
TCAGCTGTTGAATGACACCTGCCTCAAAAGAAAAGAAGCTCCTAACCAGG
ATGGCCAAGGCAAGCCAAAGGACTTGAGGAGTAGAGGATTGTGCTTGGTT
CCACTGTCTTGCACTCAGCAAGTTGGGAGTGACAACGGAGCTGATTTCTG
GGCTCCG
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