DR908360

Overview
NameDR908360
Unique NameDR908360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:470..1128. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 353.214 bits (905), Expect = 6.836e-97
Identity = 166/192 (86.46%), Postives = 180/192 (93.75%), Query Frame = 3
Query:    3 ALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 578
            A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVALLGSHSVGRTHCVKLVHRLYPEVDP+LNPDHVPHMLHKCPD+IPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLA DKRTRP VKKMAK Q YFFKEF+RAI +LSENNPLTG+KGEIRK CNLANK H
Sbjct:  139 AVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLANKNH 330          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.820e-57
Identity = 107/189 (56.61%), Postives = 135/189 (71.43%), Query Frame = 3
Query:    6 LGGPYIPL-KTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            L GP I + KTGRRD R S    +E  +P+HNDS+S V+  F +IGID    VALLG+HSVGR HCV LVHRLYP +DP L+P +  ++  +CP   PDP AV Y RNDR TPMV+DN YY+NI+ +KGL+++D +LATD RT P+V KMA   +YF ++FSR + LLSE NPLTG +GEIRK C   N
Sbjct:  139 LKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.738e-29
Identity = 67/188 (35.64%), Postives = 107/188 (56.91%), Query Frame = 3
Query:    6 LGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            +GGPY  +  GRRD R S++ ++   LP  +  +S ++++F++ G     +VAL G+H++G +HC +  +R+ P      NP     +   C ++  DP    +  ND  TP   DN Y++NI    GL+  DH L +D RTRP+V+  A+ Q  FF +F+ A+  LS +  LTG +GEIR+ C+  N
Sbjct:  143 VGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTISVF--NDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.348e-27
Identity = 70/188 (37.23%), Postives = 105/188 (55.85%), Query Frame = 3
Query:    6 LGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            +GGPY  +  GRRD R S++ +L   LP  +  +S ++++F + G     +VAL G+HS+G +HC + V R+    +   NP     +   C +   DP    +  ND  TP   DN YY+N+    GL+  DH L +D RTR +V   AK+QD FFK+F++A+  LS     TG +GEIR+ C+  N
Sbjct:  132 VGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGRVGRN-NTGYNPRFAVALKKACANYPKDPTISVF--NDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.406e-25
Identity = 66/191 (34.55%), Postives = 104/191 (54.45%), Query Frame = 3
Query:    6 LGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 578
            +GGP+  +K GR+DG +S+A  ++  LP  N S+  +L  F   G     LVAL G H++G +HC +  +R++P+VDP LN      +   C +   +     ++  D  TP   DN Y++N+    GL+  DH L  D  TRP+V+  A +Q  FF++F+RA+  L          GE+R+ C+  NKL+
Sbjct:  137 VGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDPELNAKFAGVLKDLCKNFETNKTMAAFL--DPVTPGKFDNMYFKNLKRGLGLLASDHILFKDPSTRPFVELYANNQTAFFEDFARAMEKLGRVGVKGEKDGEVRRRCDHFNKLN 325          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.092e-25
Identity = 65/192 (33.85%), Postives = 99/192 (51.56%), Query Frame = 3
Query:    9 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            GGP  P++ GRRDGR S    ++  LP    +++ +   F+  G+    ++AL G+H++G  HC K+  R+Y       +DP++N  +V  +   CP  +    A+     D  +P   DN Y++N+   KGL   D  L TD+R+R  V   A S+  F + F  AIT L     LTG  GEIR+ C+  N
Sbjct:  137 GGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCPIGVDVRIAINM---DPTSPRTFDNAYFKNLQQGKGLFTSDQILFTDQRSRSTVNSFANSEGAFRQAFITAITKLGRVGVLTGNAGEIRRDCSRVN 325          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 66/196 (33.67%), Postives = 104/196 (53.06%), Query Frame = 3
Query:    3 ALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHR--LYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            ALGGP +P+ TGRRDGR S A  +   + D + ++  ++  F++ G+    LV L G+H++G  HC     R  L P+     +D +L+  +   +++KC  ++     V  V ND  T    DN YY+N+L +KGL   D  L  D RTR  V+ +A  Q+ FF  ++ +   +S      G +GEIR+ C+  N
Sbjct:  136 ALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTV--VDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDRTRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSCSAVN 329          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.652e-24
Identity = 62/196 (31.63%), Postives = 102/196 (52.04%), Query Frame = 3
Query:    3 ALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-------YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            A GGP + + TGRRDG++S A  +   + D + ++  +++ F++ G+    LV L G+H++G +HC     R        +  +D +L+  +   +++KC  +      V    ND  T  V DN YYRN+  +KGL   D  L  D RTR  V+++A  ++ FF+ +S +   LS      G  GEIR+ C+  N
Sbjct:  134 AAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVS---NDPETSAVFDNQYYRNLETHKGLFQTDSALMEDNRTRTMVEELASDEESFFQRWSESFVKLSMVGVRVGEDGEIRRSCSSVN 326          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24
Identity = 66/192 (34.38%), Postives = 95/192 (49.48%), Query Frame = 3
Query:    9 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            GGP   ++ GRRDG  S A  +   LP     ++ +   FA  G+    ++AL G+H++G  HC K+ +RLY       VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+   KGL   D  L TD R++P V   A +   F + F  ++  L      TG+ G IR+ C   N
Sbjct:  141 GGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNI-DPRVA--INMDPNTPRQFDNVYYKNLQQGKGLFTSDQVLFTDSRSKPTVDLWANNGQLFNQAFISSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
BLAST of DR908360 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.524e-24
Identity = 65/192 (33.85%), Postives = 97/192 (50.52%), Query Frame = 3
Query:    9 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 569
            GGP   ++ GR DG  S A  +   LP   D ++ +   FA  G+    ++AL G+H++G  HC K+ +R+Y      +VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+   KGL   D  L TD+R++P V   A +   F + F  ++  L      TG+ G IR+ C   N
Sbjct:  141 GGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNI-DPRVA--INMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFTDRRSKPTVDLWANNGQLFNQAFINSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
The following BLAST results are available for this feature:
BLAST of DR908360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER42_ARATH6.836e-9786.46Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH1.820e-5756.61Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER63_ARATH2.738e-2935.64Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER31_ARATH3.348e-2737.23Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER41_ARATH1.406e-2534.55Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER45_ARATH4.092e-2533.85Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER18_ARATH6.980e-2533.67Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER46_ARATH2.652e-2431.63Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER51_ARATH4.524e-2434.38Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER50_ARATH4.524e-2433.85Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16488 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-56_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908360 ID=DR908360; Name=DR908360; organism=Citrus sinensis; type=EST; length=658bp
TTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGT
AGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAACGA
CAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCC
CTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGT
GTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCC
TGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACC
CCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTG
GACAACAACTACTATAGGAACATATTGGACAACAAGGGCTTGATGATGGT
TGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGA
TGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACT
CTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAGGGTGAGATCCGAAA
GGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACA
GCTGTATTAGCTACACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTTC
TTCTATGA
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