DR908330
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1B_ARATH (Histone chaperone ASF1B OS=Arabidopsis thaliana GN=ASF1B PE=1 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 3.201e-74 Identity = 131/146 (89.73%), Postives = 138/146 (94.52%), Query Frame = 2 Query: 176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613 MS++NITNVTVLDNPA F+NPFQFEISYECLT LKDDLEWKLIYVGSAEDETYDQ+LESVLVGPVNVGNYRFVLQAD PDP KIREEDIIGVTVLLLTCSY+ QEF+RVGYYVNNDYDDEQLREEPP K LID+VQRNIL DKPRV Sbjct: 1 MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESVLVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILTDKPRV 146 HSP 2 Score: 28.4906 bits (62), Expect = 3.201e-74 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 616 KFPINFHPENNE 651 KFPINFHPEN + Sbjct: 148 KFPINFHPENEQ 159
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1A_ARATH (Probable histone chaperone ASF1A OS=Arabidopsis thaliana GN=ASF1A PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 5.436e-71 Identity = 127/146 (86.99%), Postives = 137/146 (93.84%), Query Frame = 2 Query: 176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613 MSA+ ITNV VL NPA F++PFQFEISYECL LKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFV QADPPDPSKI+EEDIIGVTVLLLTCSY+GQEF+RVGYYVNNDY+DEQL+EEPP K LID+VQRNIL+DKPRV Sbjct: 1 MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFLRVGYYVNNDYEDEQLKEEPPTKVLIDKVQRNILSDKPRV 146 HSP 2 Score: 24.2534 bits (51), Expect = 5.436e-71 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 616 KFPINFHPENNE 651 KFPI+FHPE + Sbjct: 148 KFPIDFHPEEEQ 159
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_DROME (Histone chaperone asf1 OS=Drosophila melanogaster GN=asf1 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.113e-53 Identity = 96/146 (65.75%), Postives = 120/146 (82.19%), Query Frame = 2 Query: 176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613 M+ V+ITNV VLDNP++F NPFQFE+++EC+ LK+DLEWK+IYVGSAE E +DQ+L+++ VGPV G + FV QADPPD SKI E D +GVT++LLTCSY GQEFVRVGYYVNNDY D ++RE PP K L +++ RNILA KPRV Sbjct: 1 MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKEDLEWKMIYVGSAESEEHDQVLDTIYVGPVPEGRHIFVFQADPPDVSKIPEPDAVGVTIVLLTCSYRGQEFVRVGYYVNNDYADPEMRENPPTKPLFEKLTRNILASKPRV 146
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1B_MOUSE (Histone chaperone ASF1B OS=Mus musculus GN=Asf1b PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 4.871e-50 Identity = 92/146 (63.01%), Postives = 115/146 (78.77%), Query Frame = 2 Query: 176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613 M+ V++ NV VL+NP+ F +PF+FEIS+EC L DDLEWK+IYVGSAE E +DQ+L+SVLVGPV G + FV QAD P+PS I E D +GVTV+L+TC+Y GQEF+RVGYYVNN+Y D +LRE PPPK ++QRNILA PRV Sbjct: 1 MAKVSVLNVAVLENPSPFHSPFRFEISFECSEALSDDLEWKIIYVGSAESEEFDQILDSVLVGPVPAGRHMFVFQADAPNPSLIPETDAVGVTVVLITCTYHGQEFIRVGYYVNNEYPDPELRENPPPKPDFSQLQRNILASNPRV 146
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_XENTR (Histone chaperone asf1 OS=Xenopus tropicalis GN=asf1 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.417e-49 Identity = 93/146 (63.70%), Postives = 112/146 (76.71%), Query Frame = 2 Query: 176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613 M+ V I N+ VLDNP F NPFQFEI++EC+ L DDLEWK+IYVGSAE E YDQ+L+SVLVGPV G + FV QAD P+ S I E D +GVTV+L+TC+Y GQEF+RVGYYVNN+Y D +LRE PP K ++QRNILA PRV Sbjct: 1 MAKVQILNMVVLDNPCPFHNPFQFEITFECIEDLPDDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNSSLIPESDAVGVTVVLITCTYRGQEFIRVGYYVNNEYSDPELRENPPLKPHFGQLQRNILASNPRV 146
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1_CHICK (Histone chaperone ASF1 OS=Gallus gallus GN=ASF1 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.417e-49 Identity = 90/146 (61.64%), Postives = 113/146 (77.40%), Query Frame = 2 Query: 176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613 M+ V + NV VLDNP+ F NPFQFEI++EC+ L +DLEWK+IYVGSAE E YDQ+L+SVLVGPV G + FV QAD P+P I + D +GVTV+L+TC+Y GQEF+RVGYYVNN+Y + +LRE PP K ++QRNILA PRV Sbjct: 1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRV 146
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1A_HUMAN (Histone chaperone ASF1A OS=Homo sapiens GN=ASF1A PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.417e-49 Identity = 90/146 (61.64%), Postives = 113/146 (77.40%), Query Frame = 2 Query: 176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613 M+ V + NV VLDNP+ F NPFQFEI++EC+ L +DLEWK+IYVGSAE E YDQ+L+SVLVGPV G + FV QAD P+P I + D +GVTV+L+TC+Y GQEF+RVGYYVNN+Y + +LRE PP K ++QRNILA PRV Sbjct: 1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRV 146
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: ASF1A_BOVIN (Histone chaperone ASF1A OS=Bos taurus GN=ASF1A PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.417e-49 Identity = 90/146 (61.64%), Postives = 113/146 (77.40%), Query Frame = 2 Query: 176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613 M+ V + NV VLDNP+ F NPFQFEI++EC+ L +DLEWK+IYVGSAE E YDQ+L+SVLVGPV G + FV QAD P+P I + D +GVTV+L+TC+Y GQEF+RVGYYVNN+Y + +LRE PP K ++QRNILA PRV Sbjct: 1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRV 146
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: AS1LA_XENLA (Histone chaperone asf1-A OS=Xenopus laevis GN=asf1-A PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.417e-49 Identity = 90/146 (61.64%), Postives = 113/146 (77.40%), Query Frame = 2 Query: 176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613 M+ V + NV VLDNP+ F NPFQFEI++EC+ L +DLEWK+IYVGSAE E YDQ+L+SVLVGPV G + FV QAD P+P I + D +GVTV+L+TC+Y GQEF+RVGYYVNN+Y + +LRE PP K ++QRNILA PRV Sbjct: 1 MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTETELRENPPVKPDFSKLQRNILASNPRV 146
BLAST of DR908330 vs. ExPASy Swiss-Prot
Match: AS1LB_XENLA (Histone chaperone asf1-B OS=Xenopus laevis GN=asf1-B PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.417e-49 Identity = 93/146 (63.70%), Postives = 111/146 (76.03%), Query Frame = 2 Query: 176 MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYIGQEFVRVGYYVNNDYDDEQLREEPPPKGLIDRVQRNILADKPRV 613 M+ V I N+ VLDNP F NPFQFEI++EC+ L DDLEWK+IYVGSAE E YDQ L+SVLVGPV G + FV QAD P+ S I E D +GVTV+L+TC+Y GQEF+RVGYYVNN+Y D +LRE PP K ++QRNILA PRV Sbjct: 1 MAKVQILNMVVLDNPCPFHNPFQFEITFECIEDLPDDLEWKIIYVGSAESEEYDQTLDSVLVGPVPAGRHMFVFQADAPNCSLIPESDAVGVTVVLITCTYRGQEFIRVGYYVNNEYSDPELRENPPLKAHFGQLQRNILASNPRV 146 The following BLAST results are available for this feature:
BLAST of DR908330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908330 ID=DR908330; Name=DR908330; organism=Citrus sinensis; type=EST; length=664bpback to top |