DR908305
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908305 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.179e-57 Identity = 107/132 (81.06%), Postives = 120/132 (90.91%), Query Frame = 3 Query: 3 FYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVLHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAYYYQAPP 398 FYTLRKPVASTINTLAGALY+VF ASPD+AR+EMR ACFDYLSLGGI S GP++LLSGLNPRP+ L LHFFAVAIYGVGR+L+PFPSP R W+GAR+I ASGIIFPI+K+EGLRQMFFPA VPA YY+APP Sbjct: 407 FYTLRKPVASTINTLAGALYKVFCASPDKARQEMRNACFDYLSLGGICSQGPIALLSGLNPRPISLFLHFFAVAIYGVGRLLIPFPSPKRMWLGARLILGASGIIFPIIKSEGLRQMFFPAIVPA-YYRAPP 537
BLAST of DR908305 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 6.675e-31 Identity = 61/126 (48.41%), Postives = 84/126 (66.67%), Query Frame = 3 Query: 3 FYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVLHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAY 380 FY +RKP+++T+NTL A QV AS DEA++ MRQ C+DYLS GG +SG ++LL G+NPRP+ L+ H A+ + +G +L PFPSP R W R+ A ++ P +KAEG+ QM FP AY Sbjct: 381 FYDIRKPMSATVNTLGNAFSQVLVASTDEAKEAMRQGCYDYLSSGGFRTSGMMALLGGMNPRPISLIYHLCAITLSSIGHLLSPFPSPLRIWHSLRLFGLAMKMLVPHLKAEGVSQMLFPVNAAAY 506
BLAST of DR908305 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.536e-30 Identity = 59/126 (46.83%), Postives = 86/126 (68.25%), Query Frame = 3 Query: 3 FYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVLHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAY 380 FY LRKP+++T+NTL + +QV AS DEA++ MRQ CFDYLS GG +SG ++L+ G+NPRPL L H F +++ +G++L PFP+P R W R++ + ++ P +KAEG+ QM P AY Sbjct: 383 FYALRKPMSATVNTLGNSFWQVLIASTDEAKEAMRQGCFDYLSSGGFRTSGLMALIGGMNPRPLSLFYHLFVISLSSIGQLLSPFPTPLRVWHSLRLLDLSLKMLVPHLKAEGIGQMLSPTNAAAY 508
BLAST of DR908305 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29 Identity = 60/127 (47.24%), Postives = 84/127 (66.14%), Query Frame = 3 Query: 3 FYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVLHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAYY 383 FY +RKP+++T+NTL A QV S DEA++ MRQ +DYL GG +SG ++LL G+NPRPL LV H A+ + +G++L PFPSP R W ++ A ++ P +KAEG+ QM FPA AY+ Sbjct: 382 FYDIRKPMSATVNTLGNAFSQVLIGSTDEAKEAMRQGVYDYLCSGGFRTSGMMALLGGMNPRPLSLVYHLCAITLSSIGQLLSPFPSPLRIWHSLKLFGLAMKMLVPNLKAEGVSQMLFPANAAAYH 508
BLAST of DR908305 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.902e-26 Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 3 Query: 3 FYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVLHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAY 380 FY +RKP+++T+NTLA QV A+ DEAR+ MRQ CF+YL+ G + G +++L G+NP PL LVLH A+ + +G +L PFPSP RFW RI+ A ++ + EG ++M P AY Sbjct: 381 FYIIRKPMSATVNTLASIFSQVLVATTDEAREGMRQGCFNYLARGDFKTRGLMTILGGMNPHPLTLVLHLVAITLTSMGHLLSPFPSPRRFWHSLRILAWALQMLGAHLVDEGFKEMLIPTNAAAY 506
BLAST of DR908305 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.465e-26 Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 3 Query: 3 FYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVLHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAY 380 FY +RKP+++T+NTL A QV AS DEA++ MRQ CFDYLS GG +SG ++LL G+NPRPL L+ H + + +G++L PFPSP W R + AEG+ QM PA AY Sbjct: 382 FYVIRKPMSATVNTLGNAFSQVLIASTDEAKEAMRQGCFDYLSSGGFRTSGMMALLGGMNPRPLSLIFHLCGITLSSIGQLLSPFPSPLGIWHSLR-----------LFGAEGVSQMLSPAYAAAY 496
BLAST of DR908305 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.305e-15 Identity = 46/115 (40.00%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 3 FYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVLHFFAVAIYGVGRILLPFP---SPYRFWIGARIITSASGIIFPIMKAE 338 F++ ++ + +N LA ALY++FSA+ D R ++R+ACF Y LGG +GPV LLS L+P PL+L+ HFF+VA+Y P P + I+ A IIFP++ +E Sbjct: 454 FWSRKRSHSFVVNVLAQALYELFSATDDSLR-QLRKACFLYFKLGGECLTGPVGLLSILSPDPLLLIRHFFSVAVYATYFCFKSEPWATKPRALFSSGAILYKACSIIFPLIYSE 567
BLAST of DR908305 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.010e-15 Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 3 FYTLRKPVAS-TINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVLHFFAVAIYGVGRILLPFP---SPYRFWIGARIITSASGIIFPIMKAE 338 FY RK S +N LA ALY++FSA+ D++ ++R+ACF Y LGG +GPV LLS L+P PL L+ HFFAVAIY V P P + ++ A +IFP++ +E Sbjct: 454 FYWARKTSHSFVVNILAQALYELFSAT-DDSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLALIGHFFAVAIYAVYFCFKSEPWITKPRALLSSSAVLYKACSVIFPLIYSE 568
BLAST of DR908305 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15 Identity = 44/115 (38.26%), Postives = 70/115 (60.87%), Query Frame = 3 Query: 3 FYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVLHFFAVAIYGVGRILLPFP---SPYRFWIGARIITSASGIIFPIMKAE 338 F++ ++ + +N LA ALY++FSA+ D++ ++R+ACF Y LGG +GPV LLS L+P PL+L+ HFF+VAIY P P + ++ A I+FP++ +E Sbjct: 453 FWSRKRTHSFVVNVLAQALYELFSAT-DDSLHQLRKACFLYFKLGGECVTGPVGLLSILSPHPLVLIRHFFSVAIYATYFCFKSEPWATKPRALFSSGAVLYKACSILFPLIYSE 566 The following BLAST results are available for this feature:
BLAST of DR908305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908305 ID=DR908305; Name=DR908305; organism=Citrus sinensis; type=EST; length=668bpback to top |